| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901046
Identifier: 159901046
GI number: 159901046
Start: 5803403
End: 5804299
Strand: Reverse
Name: 159901046
Synonym: Haur_4534
Alternate gene names: NA
Gene position: 5804299-5803403 (Counterclockwise)
Preceding gene: 159901047
Following gene: 159901045
Centisome position: 91.46
GC content: 57.08
Gene sequence:
>897_bases ATGATTGCTTGTCCTGTCTGTAATGCGACCAACCAAACAGGTGCCTTATTTTGTGAAATGTGTGGCCATCGTTTGCCAAC CGTGGCGGCGGCGGTAACCCCACCGCGTGCGGTTGCCGGTGGCGTTCAATGCCCAACCTGCAAGCATATTGCTACACCTG GCGAGGCTTTTTGTGATGAATGTGGTACGCCGTTGAATGTTGGGGTTGCCGCTGCCCCCGCTGTGCCAGTTGCTCCCGCC CCAATTGCACCAAGTGTGCAGCCCGCGCCGCAGCCCAGTTATCCTGCACCGCAACCGATTGCCAATGCAGCACCAAGCTG CCCAAGCTGTCGCGCGGCGGTTATTCCTGGCGAGGCTTTTTGCGATAACTGTGGTGCTTCGTTATTGGCGGGTGCACCTG CTGCTCCAGCCGCTCGGCCAGTTGCGCCAGCGCCCGTGCAGCCAAGCTATGCGCCGCCAGTCCAAGCTGCTCCGGTTGTG CCAGCAGCACCAGTTTACATGCCACCACCAGCGCCAGTTGTGCCAAAGCCACCTGTGGCAGCGCCCGTTGCTCCGGCAGC GGTTGGCATTCAATCGTTGGCGGGGTTTGTGCTGGTAACGGCGGCAGGCACACGCATCAATTTGCCAGCCAAAGCCGAGA TTGTGGTAGGCCGCGAAGATGCTGTCTCGAATAATTATCCTGATGTTGATTTAAACCCCCATAATGGCTTGGCCGATGGC GTTGGCCGTCGTCATGCCCGAATTTTTGTGCGGGCTGGCGTGGTGCAACTTGAAGATTTGGATAGCACCAACGGAACAAC CGTGAATAAACAACGGCTCCAAGCTCGCCAAGTAGTTAATTTAAATGTTGGCGATGAAATTCGCCTTGGACGATGTGTGT TGCAATGGCAACGCTAG
Upstream 100 bases:
>100_bases AGCGTTAGCCGATTTGGGTTATCGCTAAATTGCATTGACATCAAGGAACGCGGCGTGCTATCGTTGCCACAGAGTCTCAT GATTGTGGAGTGATCGTTGT
Downstream 100 bases:
>100_bases TGTGATGTAGCAGTTATGAGTGGACAGGCCACGTTTCAACAAGGACGCTACCAAGTACGCAACGAGCTTTTTCGCGATGA ATGCGGCGTAATGTATTTGG
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Forkhead-Associated Protein
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MIACPVCNATNQTGALFCEMCGHRLPTVAAAVTPPRAVAGGVQCPTCKHIATPGEAFCDECGTPLNVGVAAAPAVPVAPA PIAPSVQPAPQPSYPAPQPIANAAPSCPSCRAAVIPGEAFCDNCGASLLAGAPAAPAARPVAPAPVQPSYAPPVQAAPVV PAAPVYMPPPAPVVPKPPVAAPVAPAAVGIQSLAGFVLVTAAGTRINLPAKAEIVVGREDAVSNNYPDVDLNPHNGLADG VGRRHARIFVRAGVVQLEDLDSTNGTTVNKQRLQARQVVNLNVGDEIRLGRCVLQWQR
Sequences:
>Translated_298_residues MIACPVCNATNQTGALFCEMCGHRLPTVAAAVTPPRAVAGGVQCPTCKHIATPGEAFCDECGTPLNVGVAAAPAVPVAPA PIAPSVQPAPQPSYPAPQPIANAAPSCPSCRAAVIPGEAFCDNCGASLLAGAPAAPAARPVAPAPVQPSYAPPVQAAPVV PAAPVYMPPPAPVVPKPPVAAPVAPAAVGIQSLAGFVLVTAAGTRINLPAKAEIVVGREDAVSNNYPDVDLNPHNGLADG VGRRHARIFVRAGVVQLEDLDSTNGTTVNKQRLQARQVVNLNVGDEIRLGRCVLQWQR >Mature_298_residues MIACPVCNATNQTGALFCEMCGHRLPTVAAAVTPPRAVAGGVQCPTCKHIATPGEAFCDECGTPLNVGVAAAPAVPVAPA PIAPSVQPAPQPSYPAPQPIANAAPSCPSCRAAVIPGEAFCDNCGASLLAGAPAAPAARPVAPAPVQPSYAPPVQAAPVV PAAPVYMPPPAPVVPKPPVAAPVAPAAVGIQSLAGFVLVTAAGTRINLPAKAEIVVGREDAVSNNYPDVDLNPHNGLADG VGRRHARIFVRAGVVQLEDLDSTNGTTVNKQRLQARQVVNLNVGDEIRLGRCVLQWQR
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30179; Mature: 30179
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIACPVCNATNQTGALFCEMCGHRLPTVAAAVTPPRAVAGGVQCPTCKHIATPGEAFCDE CEECCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHCCCCCCCCHHCCCCHHHHHHH CGTPLNVGVAAAPAVPVAPAPIAPSVQPAPQPSYPAPQPIANAAPSCPSCRAAVIPGEAF CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCHHH CDNCGASLLAGAPAAPAARPVAPAPVQPSYAPPVQAAPVVPAAPVYMPPPAPVVPKPPVA HHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC APVAPAAVGIQSLAGFVLVTAAGTRINLPAKAEIVVGREDAVSNNYPDVDLNPHNGLADG CCCCHHHHHHHHHHCEEEEEECCCEECCCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHH VGRRHARIFVRAGVVQLEDLDSTNGTTVNKQRLQARQVVNLNVGDEIRLGRCVLQWQR HCCHHEEEEEEECEEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCEEECCEEEEECC >Mature Secondary Structure MIACPVCNATNQTGALFCEMCGHRLPTVAAAVTPPRAVAGGVQCPTCKHIATPGEAFCDE CEECCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHCCCCCCCCHHCCCCHHHHHHH CGTPLNVGVAAAPAVPVAPAPIAPSVQPAPQPSYPAPQPIANAAPSCPSCRAAVIPGEAF CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCHHH CDNCGASLLAGAPAAPAARPVAPAPVQPSYAPPVQAAPVVPAAPVYMPPPAPVVPKPPVA HHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC APVAPAAVGIQSLAGFVLVTAAGTRINLPAKAEIVVGREDAVSNNYPDVDLNPHNGLADG CCCCHHHHHHHHHHCEEEEEECCCEECCCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHH VGRRHARIFVRAGVVQLEDLDSTNGTTVNKQRLQARQVVNLNVGDEIRLGRCVLQWQR HCCHHEEEEEEECEEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA