| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901033
Identifier: 159901033
GI number: 159901033
Start: 5787632
End: 5788003
Strand: Reverse
Name: 159901033
Synonym: Haur_4520
Alternate gene names: NA
Gene position: 5788003-5787632 (Counterclockwise)
Preceding gene: 159901035
Following gene: 159901032
Centisome position: 91.2
GC content: 44.89
Gene sequence:
>372_bases ATGCAATTCAGTCAACAGGTTTTTGATTACTATCTGCAATATATAACCGCTGCTTGGTTTGGTCGCAACGATCTACCACC CGAAGACTTGAGCGGCTATAAAGCCTATGTCGAAGAACTTAAACTGCACCTAACCAAACATCACGATGAGCAAATCTTTA AGGCAGCCTTAGAAGAATCCTTGACCACTGATGCTGTTGATTATGAGCGCTATAGCGGTGGTACTTATCCATTTGAGCCT GAGGAAGTGCAAGCGATTATGCACTATATCTACCAAACCTTGTGGCCTGAGGCCGAGTTGCCTGCGGTTGCACCGCCGAT CAAATGGCTTGATTTGAGCGTTAATCAATGGTTTGCCAGTAAAAAGGCCTAA
Upstream 100 bases:
>100_bases CGGTTGAGTGGAACCCAACAACCAACAATTGGGATGTGGTTCAGCACTTTCCCACAAAATAATTGAAACATCAAGGTCTA TCACTTTTCAAGGAAGCATT
Downstream 100 bases:
>100_bases CAGGGAATCCAAACAGCCACAGCGCATAGACTACCCCTTGATTGCACAATCAAGGGGTTTTGCTTGGTCTTGTTCTTGCA ACAGATTGATTGGAGCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MQFSQQVFDYYLQYITAAWFGRNDLPPEDLSGYKAYVEELKLHLTKHHDEQIFKAALEESLTTDAVDYERYSGGTYPFEP EEVQAIMHYIYQTLWPEAELPAVAPPIKWLDLSVNQWFASKKA
Sequences:
>Translated_123_residues MQFSQQVFDYYLQYITAAWFGRNDLPPEDLSGYKAYVEELKLHLTKHHDEQIFKAALEESLTTDAVDYERYSGGTYPFEP EEVQAIMHYIYQTLWPEAELPAVAPPIKWLDLSVNQWFASKKA >Mature_123_residues MQFSQQVFDYYLQYITAAWFGRNDLPPEDLSGYKAYVEELKLHLTKHHDEQIFKAALEESLTTDAVDYERYSGGTYPFEP EEVQAIMHYIYQTLWPEAELPAVAPPIKWLDLSVNQWFASKKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14412; Mature: 14412
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFSQQVFDYYLQYITAAWFGRNDLPPEDLSGYKAYVEELKLHLTKHHDEQIFKAALEES CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTDAVDYERYSGGTYPFEPEEVQAIMHYIYQTLWPEAELPAVAPPIKWLDLSVNQWFAS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCHHHHHHHC KKA CCC >Mature Secondary Structure MQFSQQVFDYYLQYITAAWFGRNDLPPEDLSGYKAYVEELKLHLTKHHDEQIFKAALEES CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTDAVDYERYSGGTYPFEPEEVQAIMHYIYQTLWPEAELPAVAPPIKWLDLSVNQWFAS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCHHHHHHHC KKA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA