| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900970
Identifier: 159900970
GI number: 159900970
Start: 5698651
End: 5699310
Strand: Reverse
Name: 159900970
Synonym: Haur_4457
Alternate gene names: NA
Gene position: 5699310-5698651 (Counterclockwise)
Preceding gene: 159900972
Following gene: 159900969
Centisome position: 89.8
GC content: 43.94
Gene sequence:
>660_bases ATGACCCACCAACAAACATATATCAACCTTGGGTATTATCTTTCACACGAAGGGTCGTCTTGTGATCACAACAATATCAC AACCCCTGAATTTTTCTTTACCCAAGATGAACAACAGCCATTAGTGCTTGATCCGATTTGTCTTGATAAAATCAGCAATG TTGGGGCAGCAACCGATTTGCTCGGCCAAAAGCTCGACGCAGGATTTGAGTTTCCATATGTATTTACCACGTTTGAGCTA GCGTTGGAATTTGTTGAACGTTTTTGTAGCAAACGCTATCAATGGCAAATTATAGGGATTGCCCTGCCGAAACAGTTTGT TGCAAGCTCTTTGGCGGCGGTTGAAGCATTATATACCCAGCCCAAGCCAGCCTTGTATGCTATGCTGCAAGCCCAACAAG CGCCACACCCAGCCATGCAGCCTCTTGGCTTTGATATCCTCTCGTTTGACATTTTTTGTTGGGAATCATATCTGTATCGC AACGTCTTGCCGCAAAAACCAATCTTGCTTGATTTAAATCAGCATCAGCTCATCGAAGACTACTCCGAAGCGGTACGGCT TACGCGTCGAATCATCAATCGAGAGATTAGTTGGGATGGTCATCCAATCTCACTTGGCAATTGGGTTCCATGTTTAATTC AGTCGTTGGTTGTAAAATAA
Upstream 100 bases:
>100_bases ACGCAGCCTTTAATTCATTCGTTGGTTGTAGATTAAATGCCGCTGCATCCAGCATAATTTGGCTGCACGGCTCACCAAGT TTAGGCTTGAGAGGAATTCG
Downstream 100 bases:
>100_bases AATCTATCTATTCTAACTAATGTGGGCCAACTTCTCGATGGAGCTGCATTTTTGAGCCAAACCAATGCCATGCAAGCAAC CCTTCGCCAATTAATCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTHQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDLLGQKLDAGFEFPYVFTTFEL ALEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQPKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYR NVLPQKPILLDLNQHQLIEDYSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK
Sequences:
>Translated_219_residues MTHQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDLLGQKLDAGFEFPYVFTTFEL ALEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQPKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYR NVLPQKPILLDLNQHQLIEDYSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK >Mature_218_residues THQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDLLGQKLDAGFEFPYVFTTFELA LEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQPKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYRN VLPQKPILLDLNQHQLIEDYSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25104; Mature: 24973
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDL CCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEECHHHHHHHHCCCHHHHH LGQKLDAGFEFPYVFTTFELALEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCC PKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYRNVLPQKPILLDLNQHQLIED CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH YSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK HHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCC >Mature Secondary Structure THQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDL CCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEECHHHHHHHHCCCHHHHH LGQKLDAGFEFPYVFTTFELALEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCC PKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYRNVLPQKPILLDLNQHQLIED CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH YSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK HHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA