| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900965
Identifier: 159900965
GI number: 159900965
Start: 5695594
End: 5695842
Strand: Reverse
Name: 159900965
Synonym: Haur_4452
Alternate gene names: NA
Gene position: 5695842-5695594 (Counterclockwise)
Preceding gene: 159900966
Following gene: 159900964
Centisome position: 89.75
GC content: 39.76
Gene sequence:
>249_bases ATGAATCAGAAATCTGTCAATCTCCTCAGCTTGCTCAGTGGATTTTTGGGAACGTTCCTTGGTTTGGTCATCGCTTACCA AGCGATTTCAAGCGATCAGCTCTGGCCAAATCTTTGGGGTGGCTTGGGCTTTGGTTTATGGGGCTTAGATAGCTTACTGG ATAAAAAAATAAATCCTCTTGCCAAGTCAATTATATTGATCGTTGGAATGCTCTGTTTAGTTATTTATTTAATTGGTTTG CTCAGTTAA
Upstream 100 bases:
>100_bases CGCAAATCGCTTAACCGCCTCCAAAATTTGGCGGTTGGCAACCCTGACAGCACTTTAACGTAGCATAAACGAGTTTCAAA TTGAATTGAATGGAGTGGTT
Downstream 100 bases:
>100_bases TTAGAAGAAAGAGAGTGAGAGATGCAAATGGTATGTTGGATCATTATTGGATTTATGGTTATTACTGCAATGCTTGGGGG TTATTTTTGGCTGAATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MNQKSVNLLSLLSGFLGTFLGLVIAYQAISSDQLWPNLWGGLGFGLWGLDSLLDKKINPLAKSIILIVGMLCLVIYLIGL LS
Sequences:
>Translated_82_residues MNQKSVNLLSLLSGFLGTFLGLVIAYQAISSDQLWPNLWGGLGFGLWGLDSLLDKKINPLAKSIILIVGMLCLVIYLIGL LS >Mature_82_residues MNQKSVNLLSLLSGFLGTFLGLVIAYQAISSDQLWPNLWGGLGFGLWGLDSLLDKKINPLAKSIILIVGMLCLVIYLIGL LS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8863; Mature: 8863
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKSVNLLSLLSGFLGTFLGLVIAYQAISSDQLWPNLWGGLGFGLWGLDSLLDKKINPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKSIILIVGMLCLVIYLIGLLS HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNQKSVNLLSLLSGFLGTFLGLVIAYQAISSDQLWPNLWGGLGFGLWGLDSLLDKKINPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKSIILIVGMLCLVIYLIGLLS HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA