The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900964

Identifier: 159900964

GI number: 159900964

Start: 5695021

End: 5695566

Strand: Reverse

Name: 159900964

Synonym: Haur_4451

Alternate gene names: NA

Gene position: 5695566-5695021 (Counterclockwise)

Preceding gene: 159900965

Following gene: 159900963

Centisome position: 89.74

GC content: 35.35

Gene sequence:

>546_bases
ATGGTATGTTGGATCATTATTGGATTTATGGTTATTACTGCAATGCTTGGGGGTTATTTTTGGCTGAATCAATCAGAACC
ACGCCCTATTCCACCAGCAGGCTGGCAAACGATTCACCAAGATACGTTAATCGTTTCATTGCCTCCAGAATATATCGTCT
TGAACCCAAATTTGGCGAGTGCCAATCTTGATTTTACCAAGACTTATAGTGGAACCTACGAAACTTTAACAAAAATTACC
AATGCTCCGGTCAAGATCGATTTTTTAGCCGTAAATCCTGAAAATGGCGATACAATCGTAGTTTTTGATAAAACATTCAA
TAAAAATTCCACTCTATTGAGTGAACAATTAATTGATATTTCAGATTTGATGAGCAGTATTCGTAACCATAACCAACAAA
CAACTGATACATTTGTTACTAGCAGATTAATCACAAAATATGATCGCGAATTAGATGTTCAAAAGATCAGCGAGAGCAAC
CAAAATGAGGAAAGTAAAAACATCTTTGAGCTAATTGGCCAGAATATTGTATTAGAAGATGATTAA

Upstream 100 bases:

>100_bases
TCTTGCCAAGTCAATTATATTGATCGTTGGAATGCTCTGTTTAGTTATTTATTTAATTGGTTTGCTCAGTTAATTAGAAG
AAAGAGAGTGAGAGATGCAA

Downstream 100 bases:

>100_bases
GCCACGATCACAACATACGCCGAGAAGCTTCATGTTACACCTTGGGAAGTGTTGGCTGAAGTTAAGTAAATTACTCAAAA
ATCCAACTTGACAGACTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVCWIIIGFMVITAMLGGYFWLNQSEPRPIPPAGWQTIHQDTLIVSLPPEYIVLNPNLASANLDFTKTYSGTYETLTKIT
NAPVKIDFLAVNPENGDTIVVFDKTFNKNSTLLSEQLIDISDLMSSIRNHNQQTTDTFVTSRLITKYDRELDVQKISESN
QNEESKNIFELIGQNIVLEDD

Sequences:

>Translated_181_residues
MVCWIIIGFMVITAMLGGYFWLNQSEPRPIPPAGWQTIHQDTLIVSLPPEYIVLNPNLASANLDFTKTYSGTYETLTKIT
NAPVKIDFLAVNPENGDTIVVFDKTFNKNSTLLSEQLIDISDLMSSIRNHNQQTTDTFVTSRLITKYDRELDVQKISESN
QNEESKNIFELIGQNIVLEDD
>Mature_181_residues
MVCWIIIGFMVITAMLGGYFWLNQSEPRPIPPAGWQTIHQDTLIVSLPPEYIVLNPNLASANLDFTKTYSGTYETLTKIT
NAPVKIDFLAVNPENGDTIVVFDKTFNKNSTLLSEQLIDISDLMSSIRNHNQQTTDTFVTSRLITKYDRELDVQKISESN
QNEESKNIFELIGQNIVLEDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20503; Mature: 20503

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCWIIIGFMVITAMLGGYFWLNQSEPRPIPPAGWQTIHQDTLIVSLPPEYIVLNPNLAS
CHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEECCCEEEEECCCCEEEECCCCCC
ANLDFTKTYSGTYETLTKITNAPVKIDFLAVNPENGDTIVVFDKTFNKNSTLLSEQLIDI
CCCCEEEECCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHCH
SDLMSSIRNHNQQTTDTFVTSRLITKYDRELDVQKISESNQNEESKNIFELIGQNIVLED
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCCEEEEC
D
C
>Mature Secondary Structure
MVCWIIIGFMVITAMLGGYFWLNQSEPRPIPPAGWQTIHQDTLIVSLPPEYIVLNPNLAS
CHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEECCCEEEEECCCCEEEECCCCCC
ANLDFTKTYSGTYETLTKITNAPVKIDFLAVNPENGDTIVVFDKTFNKNSTLLSEQLIDI
CCCCEEEECCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHCH
SDLMSSIRNHNQQTTDTFVTSRLITKYDRELDVQKISESNQNEESKNIFELIGQNIVLED
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCCEEEEC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA