| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900878
Identifier: 159900878
GI number: 159900878
Start: 5577983
End: 5578402
Strand: Direct
Name: 159900878
Synonym: Haur_4365
Alternate gene names: NA
Gene position: 5577983-5578402 (Clockwise)
Preceding gene: 159900877
Following gene: 159900879
Centisome position: 87.89
GC content: 52.62
Gene sequence:
>420_bases ATGCTAGCCTGTAGCTATTGTGGTGGCGATGTCCCCGACGATTGGGAAGAATGTGCGACCTGTGGCTGGTTGCGTGATGG CTCGTTGGCCTTGCCACTTGAGCCACTCAAATGCCCATATTGTGGTGATGATGTGGCCGATGATTGGGAAGAGTGTCCGA GCTGTGGCTGGTTGCGCGATGGCTCATTGGGAATTCCCCAGCCCGCCCCGCCGCCAGCTACTGTGCACCAACGAATTTGC TTGCGTTGCCAAGCGCAGATGACATTTTTGGGCTTCAAGCAATTTCGTGAAAGCTCAACTTCGCTGGATATTTTGCAAGG CCGTTTTGGCTCGTTTCGCCAAGATTTTCAAATTTTGGAGTTGCATGGCTGTGGTTATTGTGGCTATGCCGAGTTGGCCT TGCCGCACATTGGTAGTTAA
Upstream 100 bases:
>100_bases GTGAGTTTGCTGCTTGCGCCGTTGCTTTTGCCTCTGCAACGCCTTATTCCCCTCAGCGTATTGTTCTTGCTTAAAATTAA TTCCTAGCGAGAGAGTATTT
Downstream 100 bases:
>100_bases TTGATGGCGCAACAATCGCCTGCTAGCGGCGTATAACCCCATAGCGAACCATAACAGGAGGAACAACTATGGGGTTATTT GATGGATTAATGGGCAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRDGSLGIPQPAPPPATVHQRIC LRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILELHGCGYCGYAELALPHIGS
Sequences:
>Translated_139_residues MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRDGSLGIPQPAPPPATVHQRIC LRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILELHGCGYCGYAELALPHIGS >Mature_139_residues MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRDGSLGIPQPAPPPATVHQRIC LRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILELHGCGYCGYAELALPHIGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15309; Mature: 15309
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 8.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRD CEECCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCC GSLGIPQPAPPPATVHQRICLRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCEEEE LHGCGYCGYAELALPHIGS ECCCCCCCHHHHCCCCCCC >Mature Secondary Structure MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRD CEECCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCC GSLGIPQPAPPPATVHQRICLRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCEEEE LHGCGYCGYAELALPHIGS ECCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA