Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900863

Identifier: 159900863

GI number: 159900863

Start: 5558870

End: 5559502

Strand: Reverse

Name: 159900863

Synonym: Haur_4350

Alternate gene names: NA

Gene position: 5559502-5558870 (Counterclockwise)

Preceding gene: 159900864

Following gene: 159900862

Centisome position: 87.6

GC content: 50.55

Gene sequence:

>633_bases
ATGCGTTCTCGCCATGAAGTTGCCGTGGTGCAATGCCCTGCTTGTGGGGCGCAATTCGATGCGCCCCTGTGGCTGATTCT
CGATGCCGAGGAGCAGCCTGGTTTAGTGCAACAGTTATTTGATGGTCGTTTGCGCGAAACCCAATGCCCCTATTGCGATG
CGCTTGGCTCGTTAACTGCACCATTGTTGTATCATGATGCTCGCTATGAGCAATTGATTTTAGCCTTGCCCTTATCGGTT
GCCAGTGCTAGCGAGGCTGAGGCTTTGGCCCAGCAATTGGTTGGCTTGTTGCATAGCCGCTTGGAACTCGAAAAGCTGGA
TCAAGCTGAATATTTGGCTCATGTCCAGCTGGCGGCAGATCTTGACGATTTGCAGTTGATGCTGATCCATGCCAGTTATC
GCCGCGAGTTAATTGCGCTGATGGCGACGATCGAATGGCCAATTCACCAGCTGGCAACAATCGATCAATTTGAAACCTTG
CTGCAAAGCCATGATCGCGACCATCATCAAGCGTTTTGGCAAAGCCTAAATGCTGACCAACAATCTGACTTAACGTTGCT
GTTTGATCGCTTAGCCGCCGTTGTGCCAATAGACAGTGGGCTTAGCGATTTTTTGCGTCGATTAATACCCTAG

Upstream 100 bases:

>100_bases
TTGGCAAAGTGCTACGGCGGGTATTGGTCGAGATGGAAAAGCAAAAACAAGCTGAGCAAATCCAGCAGGAGGCAAGTTAG
GCCAAACCTAACGTTGGAAT

Downstream 100 bases:

>100_bases
CGAGAGCCATGCATGCCAATTTCGTATAGCCAACCATATGAGCTTGTTTGCCCGACCTGCCAAACTCCGTTTGTGGCCGA
GGCTTGGTTGATTGTTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTAPLLYHDARYEQLILALPLSV
ASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAADLDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETL
LQSHDRDHHQAFWQSLNADQQSDLTLLFDRLAAVVPIDSGLSDFLRRLIP

Sequences:

>Translated_210_residues
MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTAPLLYHDARYEQLILALPLSV
ASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAADLDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETL
LQSHDRDHHQAFWQSLNADQQSDLTLLFDRLAAVVPIDSGLSDFLRRLIP
>Mature_210_residues
MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTAPLLYHDARYEQLILALPLSV
ASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAADLDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETL
LQSHDRDHHQAFWQSLNADQQSDLTLLFDRLAAVVPIDSGLSDFLRRLIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23655; Mature: 23655

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTA
CCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH
PLLYHDARYEQLILALPLSVASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAAD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETLLQSHDRDHHQAFWQSLNADQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
QSDLTLLFDRLAAVVPIDSGLSDFLRRLIP
CCCHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTA
CCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH
PLLYHDARYEQLILALPLSVASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAAD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETLLQSHDRDHHQAFWQSLNADQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
QSDLTLLFDRLAAVVPIDSGLSDFLRRLIP
CCCHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA