| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900863
Identifier: 159900863
GI number: 159900863
Start: 5558870
End: 5559502
Strand: Reverse
Name: 159900863
Synonym: Haur_4350
Alternate gene names: NA
Gene position: 5559502-5558870 (Counterclockwise)
Preceding gene: 159900864
Following gene: 159900862
Centisome position: 87.6
GC content: 50.55
Gene sequence:
>633_bases ATGCGTTCTCGCCATGAAGTTGCCGTGGTGCAATGCCCTGCTTGTGGGGCGCAATTCGATGCGCCCCTGTGGCTGATTCT CGATGCCGAGGAGCAGCCTGGTTTAGTGCAACAGTTATTTGATGGTCGTTTGCGCGAAACCCAATGCCCCTATTGCGATG CGCTTGGCTCGTTAACTGCACCATTGTTGTATCATGATGCTCGCTATGAGCAATTGATTTTAGCCTTGCCCTTATCGGTT GCCAGTGCTAGCGAGGCTGAGGCTTTGGCCCAGCAATTGGTTGGCTTGTTGCATAGCCGCTTGGAACTCGAAAAGCTGGA TCAAGCTGAATATTTGGCTCATGTCCAGCTGGCGGCAGATCTTGACGATTTGCAGTTGATGCTGATCCATGCCAGTTATC GCCGCGAGTTAATTGCGCTGATGGCGACGATCGAATGGCCAATTCACCAGCTGGCAACAATCGATCAATTTGAAACCTTG CTGCAAAGCCATGATCGCGACCATCATCAAGCGTTTTGGCAAAGCCTAAATGCTGACCAACAATCTGACTTAACGTTGCT GTTTGATCGCTTAGCCGCCGTTGTGCCAATAGACAGTGGGCTTAGCGATTTTTTGCGTCGATTAATACCCTAG
Upstream 100 bases:
>100_bases TTGGCAAAGTGCTACGGCGGGTATTGGTCGAGATGGAAAAGCAAAAACAAGCTGAGCAAATCCAGCAGGAGGCAAGTTAG GCCAAACCTAACGTTGGAAT
Downstream 100 bases:
>100_bases CGAGAGCCATGCATGCCAATTTCGTATAGCCAACCATATGAGCTTGTTTGCCCGACCTGCCAAACTCCGTTTGTGGCCGA GGCTTGGTTGATTGTTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTAPLLYHDARYEQLILALPLSV ASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAADLDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETL LQSHDRDHHQAFWQSLNADQQSDLTLLFDRLAAVVPIDSGLSDFLRRLIP
Sequences:
>Translated_210_residues MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTAPLLYHDARYEQLILALPLSV ASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAADLDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETL LQSHDRDHHQAFWQSLNADQQSDLTLLFDRLAAVVPIDSGLSDFLRRLIP >Mature_210_residues MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTAPLLYHDARYEQLILALPLSV ASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAADLDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETL LQSHDRDHHQAFWQSLNADQQSDLTLLFDRLAAVVPIDSGLSDFLRRLIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23655; Mature: 23655
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTA CCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH PLLYHDARYEQLILALPLSVASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAAD HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETLLQSHDRDHHQAFWQSLNADQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC QSDLTLLFDRLAAVVPIDSGLSDFLRRLIP CCCHHHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MRSRHEVAVVQCPACGAQFDAPLWLILDAEEQPGLVQQLFDGRLRETQCPYCDALGSLTA CCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHH PLLYHDARYEQLILALPLSVASASEAEALAQQLVGLLHSRLELEKLDQAEYLAHVQLAAD HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDDLQLMLIHASYRRELIALMATIEWPIHQLATIDQFETLLQSHDRDHHQAFWQSLNADQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC QSDLTLLFDRLAAVVPIDSGLSDFLRRLIP CCCHHHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA