Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900816

Identifier: 159900816

GI number: 159900816

Start: 5494172

End: 5495161

Strand: Reverse

Name: 159900816

Synonym: Haur_4303

Alternate gene names: NA

Gene position: 5495161-5494172 (Counterclockwise)

Preceding gene: 159900817

Following gene: 159900815

Centisome position: 86.58

GC content: 44.04

Gene sequence:

>990_bases
ATGCCAGCGAATCGTAGCCCAATTCAGCTTCGCCGCGAAAACCTAGGAATGTACTATGGTGGCAATGATGGAATAGCAAT
TCAACGGCTGTTAGTTGAATATGTCGATTTTCTCCTAAAAAGCCAACATGCTCAGCGGATTCAGATAACTATCTTGCCAG
AGGCAGGCTTTGTTGTGCAAGATTTTGAGGCGACAATTGAATCCAATAATTTTTGTGGGTTGCCAGAAGATCAACTATTT
CACTTGCTTGGTGCTGCTCAATATTGCACGATTGATCTCCATAAAGCTGGGCAACATTATCAATTAAGCTACAGCGGCGA
GCCAACTGTTCCAGCATTACAGCTAGTTGGTTCCAGCCAAGCCAGCTGCCGAAGAATCCATTTTGTGCCTAACCACGCTA
TTTTTATAAATCGAACTAGCTCAATCCATCAATTCTTAGGTTCGTTGCGCGGCTTGGCAACGCTATTTCGAGGTTGTCGA
ATTGAGGTGGTTGACGTTATGCAAGCGACGACCAACCAGCTTTTTTACCCCAATGGCTTGCGTGATTATCTTGATGGGTT
AATCTATCATGATCTGAATCCACAGCGATATTTAGAGTTTGAAGGCGCTAATGAGCATGTTCAAATCAAGCTTGGCCTGC
GATTTGGCTATTTCAGTCGGATCGAGCAATGTTTACTGCGTTATAAGCATGTGCCGTTTGAGCCAAGTTATCGACGTGGG
ATACTCAAGGGTTTGGCCTCAGGATTAACAACTTATGCTCAAGCTCATGGCCAAATTACTGCCAGCCAAATAATCGAGCC
AGCCCAAATTCGCGATTTTGGTTGTTTACTCGTTTTAGATCATGTACCTAAAACGCTCCAAGATGCAGGCGGGCGGCCCA
GCGATCAGCTATTAATTGAAACGACAATTCAACAAATAATCCAGCAGCAACTCCCTGAGAAACTTGCAACATTATCCGAT
GCTGAAATTTATACATTGGTTATGTGGTAG

Upstream 100 bases:

>100_bases
GGGACGGAAGGGTGGCGAGACTCCTGATTCAAACCCATAAATGCTGAGAAAAGGTTTACGAATGGCCGATAATTCTCTTT
ATGCTGCTAGCAGGATTCAA

Downstream 100 bases:

>100_bases
GTTTCTGATCCATGAAGATTTTTAGCCACGAATTGCACGAATGCTTGCTTTCATTAGCACAATAGGATGGATACTTCACC
ATAATAGTCCACCAACCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQDFEATIESNNFCGLPEDQLF
HLLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCR
IEVVDVMQATTNQLFYPNGLRDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRG
ILKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIETTIQQIIQQQLPEKLATLSD
AEIYTLVMW

Sequences:

>Translated_329_residues
MPANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQDFEATIESNNFCGLPEDQLF
HLLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCR
IEVVDVMQATTNQLFYPNGLRDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRG
ILKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIETTIQQIIQQQLPEKLATLSD
AEIYTLVMW
>Mature_328_residues
PANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQDFEATIESNNFCGLPEDQLFH
LLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCRI
EVVDVMQATTNQLFYPNGLRDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRGI
LKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIETTIQQIIQQQLPEKLATLSDA
EIYTLVMW

Specific function: Unknown

COG id: COG0187

COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37174; Mature: 37043

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQ
CCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE
DFEATIESNNFCGLPEDQLFHLLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQ
HHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHCCCC
ASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCRIEVVDVMQATTNQLFYPNGL
CCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCH
RDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRG
HHHHHHHEECCCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHH
ILKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIE
HHHHHHHHHHHHHHHCCCEEHHHCCCCHHHCCCCEEEEEHHCCHHHHHCCCCCCCHHHHH
TTIQQIIQQQLPEKLATLSDAEIYTLVMW
HHHHHHHHHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure 
PANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQ
CCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE
DFEATIESNNFCGLPEDQLFHLLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQ
HHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHCCCC
ASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCRIEVVDVMQATTNQLFYPNGL
CCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCH
RDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRG
HHHHHHHEECCCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHH
ILKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIE
HHHHHHHHHHHHHHHCCCEEHHHCCCCHHHCCCCEEEEEHHCCHHHHHCCCCCCCHHHHH
TTIQQIIQQQLPEKLATLSDAEIYTLVMW
HHHHHHHHHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA