| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900789
Identifier: 159900789
GI number: 159900789
Start: 5458769
End: 5460976
Strand: Direct
Name: 159900789
Synonym: Haur_4276
Alternate gene names: NA
Gene position: 5458769-5460976 (Clockwise)
Preceding gene: 159900788
Following gene: 159900790
Centisome position: 86.01
GC content: 50.27
Gene sequence:
>2208_bases ATGCAGCGATTTAAACGATTTCTACCATTGGCGCTAATTGCCTTGAGCGCCATTATTTTTCTCATTCCGCCTGCGCGGCC TAGCATCGATGTTGTGATGGGCAGCGAAGGCGAATTTCTGGTTGAAGGCCAAACTCAAAACTTCCGAAATTTTTATGGAT TTAAGGAAGTTGAGCGGACAGAGCAAGGTGTATTTCGCTGGACAAGCGGACGTGGCAGCATTGCGTTTCCTTATTGGGAG AATGTTGCCGCCCCCTTACAGCTTAATCTATTGCTCTGTGGCTGTCGCACCGATGGTCAAACCATGCCCTTAACAGTTAC GGTCAATCAGCAAGCGTTGCTCAAACTTAATCTGAGCAATCAATGGCAATGGTATCATGTGCAACTTCCCGCTGGTTTAA CCCACCCTGATCATGATATTTTGCTTGACTTGACCTCGGCAGAATGGCGTAGCCCTGATCAACGTACCTTGGGCATTGTG GTGCAACGCATCCAAATTGAGGCGTTGGCAGCCCAACCAACCCAATCGTTCGTCGCCTGGCTAGGCTTGGCACTTGGCTT AGGGTTAATGGTGTTGTGGCAGATTCCAGTGGGCTTTGCAGGAATTGTGTTTGGGCAGTGGCTGCTTGGGGTTTATGGCT ACCAGCCCCAGTTTTTGCCAAAGGATTTTCTTCTGATCAGTTTGGTTTTTGCCAACGTGATTGGTTGGCAATGCATGCGC AATCTGCCGCAGCTATGGCGCTGGGTAAGCTTGCCACTCAGTAGCTTTTGGCTGATTAGCAGCCCTCAAATCCTTGGCTC GTGGATTTTAGATGATGCGTTTATCTCATTTCGCTATGCTGCCAATTTGGCCAATGGTCAGGGGTTGGTGTTCAACCTTG ACGAGCGGGTCGAAGGCTTTACCAATTTCCTTTGGACCTTATTAAGTAGCTTCAGCATTAAACTTGGGGCCGACCCAATT TTAGTCACCCATGCAACCAACCTGCTTTTGGGCATGGTGATTGTGGTCTTAAGTTTACAATTGGCCCATCGCTTGCATCA AAGTAGCTGGATGACCCTAGCGATACCCTTGATGTTGCTCAATTTGCCGTTATTGCTCTACACAAGTTTGGGTAGCGGCA TGGAAACCGCACTCTTTTGCGCGGGTATTTTGGCAACCGTGCTACTTGCGATCAATCAGGTCTGGGGTTATGCAGCGATC GCCACCACGCTCACGATTATGACTCGGCCTGATGGCATGCTGTTGGCTGGGATTATTGGCTTACTGGCAATTTGGCAAAG TTGGCAAACCAAGCACTGGCAGCCGCTAATACGCTACGCCGGAATCTTGAGCCTGACCTTTGTACCCTACTGGCTGGCGC GTTGGTGGTATTATGGCTATCCACTGCCCAACACGTTTTATGCCAAAGTTGGTGGCACAGCCAAACAAGCCGAACGAGGG ATTAATTATTTTATTGATTTTAACCGTAGCTACTACTTAGGTTGGCTTGGTTTAGGGCTGGGAGCACTAGCAAGTGGGCT GCGTTGGTATCAAACTAAAAAAGTACCCATCCTTGCCATCATCACATGGGCAATCGTTGGCCTCTACACCAGCTACACGA TTAGCGTGGGCGGCGATTGGATGCCAGGTTATCGTTTTATGGTCGCAACTGTGCCATGGTTTGCGCTTTTGGCAAGCTGG GGCATCAGCGAACTTTGGCACTATCGGCGTTGGCTGGGCGCTAGTGCAATCGTAGCCAGCAGCGCAATCCTGTTGCTCCT GCTCCAGCCACTTCAGCAAGAACGCCCATTAACAGTTGGTTCGGCGGCTTGGTACGAGACCGATGTGGTCAATCGCTATC GTGAAGTTGGGCTATGGATCAAAGCCAGCACACCGCCCGAAACCACGCTAACGGTTACCGCTGCCGGAGCCATACCCTAT TATGCAGAACGCACAACGATTGATGCTCATGGCTTGACCGATCTGCATATTGCGCATCTGCCAATTGATCCGAGCAAGGC GGGCAAACCTGGCCACGAAAAGCAAGACCCCGATTATGTGCTCCGTGATCGAAAACCAAGCTTAATTCCATGGGTTGCTG CACCAATGTTTACTAGCCATCCATTATTTGATGCTAACTATCGGCTGATCGAAGCCAGCGGCGTTGAAGGCCGAGGCATT CGGATGTTTGTCCGCCGTGATAGTGGCCTATTTGAGCAAGCACAATGA
Upstream 100 bases:
>100_bases TCACATTGAAATTGCTCGGCGGGCTTGATCCGGCTGAGCGAGAGCGTTTATTGAGCATGAAACTTCCATTCAAGGGCGTG CTTCGGCGCGTATTATAGCT
Downstream 100 bases:
>100_bases AAGTTTCAGTTAAAGCCATTCGAGGGTTGATTATTGCGGTCAGCGTATGTGGCCTACTTTTGCGGCTGATTTTTGCGCTC TTGCCCTTGCAAACCCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERTEQGVFRWTSGRGSIAFPYWE NVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSNQWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIV VQRIQIEALAAQPTQSFVAWLGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGFTNFLWTLLSSFSIKLGADPI LVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLLNLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAI ATTLTIMTRPDGMLLAGIIGLLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDWMPGYRFMVATVPWFALLASW GISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVGSAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPY YAERTTIDAHGLTDLHIAHLPIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI RMFVRRDSGLFEQAQ
Sequences:
>Translated_735_residues MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERTEQGVFRWTSGRGSIAFPYWE NVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSNQWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIV VQRIQIEALAAQPTQSFVAWLGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGFTNFLWTLLSSFSIKLGADPI LVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLLNLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAI ATTLTIMTRPDGMLLAGIIGLLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDWMPGYRFMVATVPWFALLASW GISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVGSAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPY YAERTTIDAHGLTDLHIAHLPIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI RMFVRRDSGLFEQAQ >Mature_735_residues MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERTEQGVFRWTSGRGSIAFPYWE NVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSNQWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIV VQRIQIEALAAQPTQSFVAWLGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGFTNFLWTLLSSFSIKLGADPI LVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLLNLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAI ATTLTIMTRPDGMLLAGIIGLLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDWMPGYRFMVATVPWFALLASW GISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVGSAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPY YAERTTIDAHGLTDLHIAHLPIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI RMFVRRDSGLFEQAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82481; Mature: 82481
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERT CCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCEEEECCCCCHHHHCCHHHHHHH EQGVFRWTSGRGSIAFPYWENVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSN HCCCEEEECCCCCEECCCHHCCCCCEEEEEEEEECCCCCCEEEEEEEECCEEEEEEECCC QWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIVVQRIQIEALAAQPTQSFVAW CEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH LGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGF HHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEECHHHHHHH TNFLWTLLSSFSIKLGADPILVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLL HHHHHHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAIATTLTIMTRPDGMLLAGIIG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHH LLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCC INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDW CEEEEECCCCEEEHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCC MPGYRFMVATVPWFALLASWGISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVG CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEC SAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPYYAERTTIDAHGLTDLHIAHL CCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEECCCEECCCCCCEEEEEEC PIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCE RMFVRRDSGLFEQAQ EEEEECCCCCCCCCC >Mature Secondary Structure MQRFKRFLPLALIALSAIIFLIPPARPSIDVVMGSEGEFLVEGQTQNFRNFYGFKEVERT CCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCEEEECCCCCHHHHCCHHHHHHH EQGVFRWTSGRGSIAFPYWENVAAPLQLNLLLCGCRTDGQTMPLTVTVNQQALLKLNLSN HCCCEEEECCCCCEECCCHHCCCCCEEEEEEEEECCCCCCEEEEEEEECCEEEEEEECCC QWQWYHVQLPAGLTHPDHDILLDLTSAEWRSPDQRTLGIVVQRIQIEALAAQPTQSFVAW CEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH LGLALGLGLMVLWQIPVGFAGIVFGQWLLGVYGYQPQFLPKDFLLISLVFANVIGWQCMR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH NLPQLWRWVSLPLSSFWLISSPQILGSWILDDAFISFRYAANLANGQGLVFNLDERVEGF HHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEECHHHHHHH TNFLWTLLSSFSIKLGADPILVTHATNLLLGMVIVVLSLQLAHRLHQSSWMTLAIPLMLL HHHHHHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NLPLLLYTSLGSGMETALFCAGILATVLLAINQVWGYAAIATTLTIMTRPDGMLLAGIIG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHH LLAIWQSWQTKHWQPLIRYAGILSLTFVPYWLARWWYYGYPLPNTFYAKVGGTAKQAERG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCC INYFIDFNRSYYLGWLGLGLGALASGLRWYQTKKVPILAIITWAIVGLYTSYTISVGGDW CEEEEECCCCEEEHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCC MPGYRFMVATVPWFALLASWGISELWHYRRWLGASAIVASSAILLLLLQPLQQERPLTVG CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEC SAAWYETDVVNRYREVGLWIKASTPPETTLTVTAAGAIPYYAERTTIDAHGLTDLHIAHL CCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEECCCEECCCCCCEEEEEEC PIDPSKAGKPGHEKQDPDYVLRDRKPSLIPWVAAPMFTSHPLFDANYRLIEASGVEGRGI CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCE RMFVRRDSGLFEQAQ EEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA