The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900771

Identifier: 159900771

GI number: 159900771

Start: 5432342

End: 5432770

Strand: Direct

Name: 159900771

Synonym: Haur_4258

Alternate gene names: NA

Gene position: 5432342-5432770 (Clockwise)

Preceding gene: 159900770

Following gene: 159900775

Centisome position: 85.59

GC content: 53.15

Gene sequence:

>429_bases
ATGCAAACTCTGCAAGCAGGCACTATCGTACCGAATTTCACCCTTCAAACCGCAATGGGCGAACGATTTAGCCGCAGCGA
TCTCCGTGGCAAAGCAGCCCTCGTCATTGTGTTTTTGCCCGCCTACGATGGCTTGAACCCAACCTACTTGGCTAATCTCA
GTACCGCCGTTCAACGCTGGTCGCATGAACAAAAAGCCGTGGTTATTTCAGCCGAAGCCTTGCCGCCAACCGAAGGCTTA
ATCGTGCTGCGCGACCCAGAAGCGAAGGTTATGGCGCAATTTTTGGGTGAGGGCAAGGGCGGTTGGTTCATCACCGATCG
CTATGGCGAGTTGTATGCCCAAGGTCAAGCACTCTCAACTGCCGATTTGCCCAAACCAATGAGCCTCAGCGAGTGGCTCG
AATATGTCAATATGCGCTGTAGTGGCTAA

Upstream 100 bases:

>100_bases
CACAAAGAGAAATTAAATCAACACGCAGCAATCGACACAAACGCGGTACACTTTCTGCAATGAATTGATAAGCGAACCAC
GATCAATTGAGGAATGAGCT

Downstream 100 bases:

>100_bases
GCTGAAGTCAAAAGTCAAAGGTCAAAAGTCAAAAAGTAAGCAGGCGGGATCAAACTACGCATCGATCAATGTTCAACGCC
GAGGCGCAGAGAACGATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MQTLQAGTIVPNFTLQTAMGERFSRSDLRGKAALVIVFLPAYDGLNPTYLANLSTAVQRWSHEQKAVVISAEALPPTEGL
IVLRDPEAKVMAQFLGEGKGGWFITDRYGELYAQGQALSTADLPKPMSLSEWLEYVNMRCSG

Sequences:

>Translated_142_residues
MQTLQAGTIVPNFTLQTAMGERFSRSDLRGKAALVIVFLPAYDGLNPTYLANLSTAVQRWSHEQKAVVISAEALPPTEGL
IVLRDPEAKVMAQFLGEGKGGWFITDRYGELYAQGQALSTADLPKPMSLSEWLEYVNMRCSG
>Mature_142_residues
MQTLQAGTIVPNFTLQTAMGERFSRSDLRGKAALVIVFLPAYDGLNPTYLANLSTAVQRWSHEQKAVVISAEALPPTEGL
IVLRDPEAKVMAQFLGEGKGGWFITDRYGELYAQGQALSTADLPKPMSLSEWLEYVNMRCSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15581; Mature: 15581

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLQAGTIVPNFTLQTAMGERFSRSDLRGKAALVIVFLPAYDGLNPTYLANLSTAVQRW
CCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHH
SHEQKAVVISAEALPPTEGLIVLRDPEAKVMAQFLGEGKGGWFITDRYGELYAQGQALST
CCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCC
ADLPKPMSLSEWLEYVNMRCSG
CCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MQTLQAGTIVPNFTLQTAMGERFSRSDLRGKAALVIVFLPAYDGLNPTYLANLSTAVQRW
CCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHH
SHEQKAVVISAEALPPTEGLIVLRDPEAKVMAQFLGEGKGGWFITDRYGELYAQGQALST
CCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCC
ADLPKPMSLSEWLEYVNMRCSG
CCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA