The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900767

Identifier: 159900767

GI number: 159900767

Start: 5427930

End: 5428397

Strand: Reverse

Name: 159900767

Synonym: Haur_4254

Alternate gene names: NA

Gene position: 5428397-5427930 (Counterclockwise)

Preceding gene: 159900772

Following gene: 159900766

Centisome position: 85.53

GC content: 50.0

Gene sequence:

>468_bases
ATGAATCAGAAACCTGAAGGCTGTTTATGGTGTGAGTATCGTGGGCCAGTCTTGGCTGGCGAAATTATTACGGTGGTCAA
TCCGCAAGTAACGTTGCAGCATGAGCTACGACGTTGCCCAACCTGTCGCGAGGCGATGGTGGATATTCGCTGGCCCGACC
GGATTGTGCGGCGCAAAGTGCGTGAATCGCCGCGCCGTTTTCGGCGATCACTGTGGGTAGTGGTTTATCCCGTCGAATGT
GCTTGGTGTGGCAGCCACAATACCGATGCCTATGAAGTGAATGCGACAGTTTCCAATCCAGTGAGCACACGTTTCAAATA
TGATATTTATCGTTGCTTAGATTGCCAACGGCCAAATGCCATTTCCTATCTGGGAGAAGTCTATGTGCATCGTGCTGATC
AAGACAAAGAATTCTTTTCGTTGTGGCATTTAGACCCAGAACTTGAGCAAAGCGAGCCAAGCGCATAG

Upstream 100 bases:

>100_bases
ACCCTCTTGGTTGTAGTTTGATACCTAAAAACTAGTCGCTCAGCTTATCGTAGGTATAATTACGCATTATCAAATTAATT
AATCAAACAATGAGGTATAT

Downstream 100 bases:

>100_bases
CTGAAAAAACTGCCAAATTAGCCAAAAACTGGCATGGTCGGATTGCGAAATAGCCCTTTATAAAGGCAAAAAATCGCTGT
GCTAGGCGTTTGACGCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKVRESPRRFRRSLWVVVYPVEC
AWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNAISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA

Sequences:

>Translated_155_residues
MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKVRESPRRFRRSLWVVVYPVEC
AWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNAISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA
>Mature_155_residues
MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKVRESPRRFRRSLWVVVYPVEC
AWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNAISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18246; Mature: 18246

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKV
CCCCCCCCEEEECCCCEEECCEEEEECCCEEEHHHHHCCCCCHHHEEECCCHHHHHHHHH
RESPRRFRRSLWVVVYPVECAWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNA
HHHHHHHHHCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCH
ISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA
HHHHHHHHEECCCCCCHHHEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKV
CCCCCCCCEEEECCCCEEECCEEEEECCCEEEHHHHHCCCCCHHHEEECCCHHHHHHHHH
RESPRRFRRSLWVVVYPVECAWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNA
HHHHHHHHHCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCH
ISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA
HHHHHHHHEECCCCCCHHHEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA