| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900767
Identifier: 159900767
GI number: 159900767
Start: 5427930
End: 5428397
Strand: Reverse
Name: 159900767
Synonym: Haur_4254
Alternate gene names: NA
Gene position: 5428397-5427930 (Counterclockwise)
Preceding gene: 159900772
Following gene: 159900766
Centisome position: 85.53
GC content: 50.0
Gene sequence:
>468_bases ATGAATCAGAAACCTGAAGGCTGTTTATGGTGTGAGTATCGTGGGCCAGTCTTGGCTGGCGAAATTATTACGGTGGTCAA TCCGCAAGTAACGTTGCAGCATGAGCTACGACGTTGCCCAACCTGTCGCGAGGCGATGGTGGATATTCGCTGGCCCGACC GGATTGTGCGGCGCAAAGTGCGTGAATCGCCGCGCCGTTTTCGGCGATCACTGTGGGTAGTGGTTTATCCCGTCGAATGT GCTTGGTGTGGCAGCCACAATACCGATGCCTATGAAGTGAATGCGACAGTTTCCAATCCAGTGAGCACACGTTTCAAATA TGATATTTATCGTTGCTTAGATTGCCAACGGCCAAATGCCATTTCCTATCTGGGAGAAGTCTATGTGCATCGTGCTGATC AAGACAAAGAATTCTTTTCGTTGTGGCATTTAGACCCAGAACTTGAGCAAAGCGAGCCAAGCGCATAG
Upstream 100 bases:
>100_bases ACCCTCTTGGTTGTAGTTTGATACCTAAAAACTAGTCGCTCAGCTTATCGTAGGTATAATTACGCATTATCAAATTAATT AATCAAACAATGAGGTATAT
Downstream 100 bases:
>100_bases CTGAAAAAACTGCCAAATTAGCCAAAAACTGGCATGGTCGGATTGCGAAATAGCCCTTTATAAAGGCAAAAAATCGCTGT GCTAGGCGTTTGACGCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKVRESPRRFRRSLWVVVYPVEC AWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNAISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA
Sequences:
>Translated_155_residues MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKVRESPRRFRRSLWVVVYPVEC AWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNAISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA >Mature_155_residues MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKVRESPRRFRRSLWVVVYPVEC AWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNAISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18246; Mature: 18246
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKV CCCCCCCCEEEECCCCEEECCEEEEECCCEEEHHHHHCCCCCHHHEEECCCHHHHHHHHH RESPRRFRRSLWVVVYPVECAWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNA HHHHHHHHHCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCH ISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA HHHHHHHHEECCCCCCHHHEEECCCCCCCCCCCCC >Mature Secondary Structure MNQKPEGCLWCEYRGPVLAGEIITVVNPQVTLQHELRRCPTCREAMVDIRWPDRIVRRKV CCCCCCCCEEEECCCCEEECCEEEEECCCEEEHHHHHCCCCCHHHEEECCCHHHHHHHHH RESPRRFRRSLWVVVYPVECAWCGSHNTDAYEVNATVSNPVSTRFKYDIYRCLDCQRPNA HHHHHHHHHCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCH ISYLGEVYVHRADQDKEFFSLWHLDPELEQSEPSA HHHHHHHHEECCCCCCHHHEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA