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The map label for this gene is 159900711

Identifier: 159900711

GI number: 159900711

Start: 5354529

End: 5355104

Strand: Reverse

Name: 159900711

Synonym: Haur_4198

Alternate gene names: NA

Gene position: 5355104-5354529 (Counterclockwise)

Preceding gene: 159900712

Following gene: 159900709

Centisome position: 84.38

GC content: 51.74

Gene sequence:

>576_bases
ATGGCCTACCCAGCCCAAACCGATTATCCAACAATTATTCGTACGGCCCAACGTTTGATTGAACGCGATGGGGTTGAGCA
ATTGGCCTTAGCCAGCCTTGCCAACGAGCTTGGCATCAAAGCTCCATCGCTCTATCGCTATGTGGCCAACAAAAATGCTT
TGCTCAAAGGCGTGGTCACGGTCACAATTCAACAATTGTTTGCGGCGTATGATCAAGTATTGGCTACCAGCCCAAACGAT
GCGCAAAGCCAGTTGGTGGCAATTAGCCATGGGCATCGCCAATTTGCCCATGCACAGCCCAAAAATTATGCTTTAGCCCT
GACCGCTGCAAGCCCTGAACAACGGGCTGATCCTGCGCTGTTGGTCGAAATGGTATTGCCAATTCAGGCAATCATGGCCC
AAATCAGTGGTCAAGAGCATTCACTGGCAGCTTTGCGCGGCTTATTGGGGCTGATTCATGGCTTTGTGCTGCTCGAACTC
AATCAACAACTCCAGCGTGGCGGCGATTTAAGCAGCGCCTTCGATTTGGCAGTGCGCAGCTATCTGGCTGGCCTAACCAC
CTTGGCAGCAGCTTAA

Upstream 100 bases:

>100_bases
TGGTTGGCGCATATTGGGCTTGATCGCATGCTTGGCTATGGGCTAAAATACCCAACTCAGTTCAAAGATACCCATTTGGG
GCGAGTTTAGAGGAGCAGCA

Downstream 100 bases:

>100_bases
AGCATCGTTAGCAAGACCATGAGCAAGGCAATCAAACAAAATAATACGATGAATGTTTGAGTACTACCATAGAACGCCTC
TAAATTATAGGGCTTGCTAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MAYPAQTDYPTIIRTAQRLIERDGVEQLALASLANELGIKAPSLYRYVANKNALLKGVVTVTIQQLFAAYDQVLATSPND
AQSQLVAISHGHRQFAHAQPKNYALALTAASPEQRADPALLVEMVLPIQAIMAQISGQEHSLAALRGLLGLIHGFVLLEL
NQQLQRGGDLSSAFDLAVRSYLAGLTTLAAA

Sequences:

>Translated_191_residues
MAYPAQTDYPTIIRTAQRLIERDGVEQLALASLANELGIKAPSLYRYVANKNALLKGVVTVTIQQLFAAYDQVLATSPND
AQSQLVAISHGHRQFAHAQPKNYALALTAASPEQRADPALLVEMVLPIQAIMAQISGQEHSLAALRGLLGLIHGFVLLEL
NQQLQRGGDLSSAFDLAVRSYLAGLTTLAAA
>Mature_190_residues
AYPAQTDYPTIIRTAQRLIERDGVEQLALASLANELGIKAPSLYRYVANKNALLKGVVTVTIQQLFAAYDQVLATSPNDA
QSQLVAISHGHRQFAHAQPKNYALALTAASPEQRADPALLVEMVLPIQAIMAQISGQEHSLAALRGLLGLIHGFVLLELN
QQLQRGGDLSSAFDLAVRSYLAGLTTLAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20483; Mature: 20352

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYPAQTDYPTIIRTAQRLIERDGVEQLALASLANELGIKAPSLYRYVANKNALLKGVVT
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHH
VTIQQLFAAYDQVLATSPNDAQSQLVAISHGHRQFAHAQPKNYALALTAASPEQRADPAL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCCHHHCCHHH
LVEMVLPIQAIMAQISGQEHSLAALRGLLGLIHGFVLLELNQQLQRGGDLSSAFDLAVRS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YLAGLTTLAAA
HHHHHHHHHCC
>Mature Secondary Structure 
AYPAQTDYPTIIRTAQRLIERDGVEQLALASLANELGIKAPSLYRYVANKNALLKGVVT
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHH
VTIQQLFAAYDQVLATSPNDAQSQLVAISHGHRQFAHAQPKNYALALTAASPEQRADPAL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCCHHHCCHHH
LVEMVLPIQAIMAQISGQEHSLAALRGLLGLIHGFVLLELNQQLQRGGDLSSAFDLAVRS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YLAGLTTLAAA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA