| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900673
Identifier: 159900673
GI number: 159900673
Start: 5306860
End: 5308410
Strand: Direct
Name: 159900673
Synonym: Haur_4160
Alternate gene names: NA
Gene position: 5306860-5308410 (Clockwise)
Preceding gene: 159900672
Following gene: 159900674
Centisome position: 83.62
GC content: 53.13
Gene sequence:
>1551_bases GTGGCAGAGTTAATTCCACTGACAATTAACGGTATCGATAGCCAAGCAACTGTGCATGTCACTGCCAGCGCTTGGAATGA GTGGGCCGTGGTCAACATGGCTTGCCCAGCCCAAACCAATGTGCGCAATGCGCAGCTTTCGATTGGTGCTGATAATTTGG GTGTGCCCCAAGTCAGCCCATTTGATCCAACTTGGCGTTGGTCGTGGTTGCCACGTGGCCAGGCGGGCACAGTTTATGGC CGGTTGCAGATTGAATGGGCTGATGGCGAAATTCAGCAGCAGCAGTTTCAATTTGAGCTTCAGCCACATTTGCTTGATCG TGAATTGTGGCGAGCATTGCTGAACGATCTCAGCTCGTTGGCTCGTTCGCTCGCCTTGCGAATTGCCAGCCCCAGCTTTG CCCAAGCGGTGTTAGTGCCGTTGCTCCCCGATGATCCTAGCCCATTTTTAGAAGCGCTGAGCTTGATTAACCAAAGTAGC CAGCAAGCGAGCCAGATTGTACGCAGCTTGCAGCGTCAGGCCAAATCGACACTTGAACGCCAACCGCGAACAACTGACTT GGGCACGGCTCAGCAATTTAAGCTCGATCAATTGGCTCAGCCCAGCGAGCGTTATCACGTGCTCGAACCGTATGGCCTCG TGCCAGAGCAGGTGCAGGCTGAGCATGCCCAAGCTTCATTCGATCTGCCAGAGCATCGCTGGTTGATTGGCTTGATTCAG CAAATTGAGCGGCGTTTACGCAATTTACGTCGCCTTGCTCGTGAACAACGCCAGCTTGATTTAACCAGTATTCAAGCAAC AATTGAGCAACGACTGACGGCTTTGCGCCAATTACGCCAAGCAGCGCCCTTGGCGGGTTTAAAAGCTCGCCAGCAGCCAG TCCAAAGCCAACTGATCAACCGTGATGCGCGTTACCGACCGATTCGCCAGTTGGCGCGAAGTTTGCATGAACAGCCGTTG CTCACCTTGGAAGTTGGCAGTTTGGCCTTGCCCTTGGCCGATGTGCCAACCCTCTATGAGCAATGGTGTGCGCTAGCTGT CGCCCAGGTTTTAGCCGAATTAGGCCAGGTTGAAGCCCAACATCTGCTGATCGATAACCCTCAGCGTGAACGTTGGGTGC TTGAATTAAATTCCGCCACACCGTTGTTGAGCGTGCGGATTGGCTCACAGCTTTGGCATTTGCGCTACCAAGCGCGATTT AGCGCCCAGCCCGATTCTGATGGTTTTTATAGCCTTGATCGATATTTGCGCATCCCCGATTTGGTGTTACAAACTGCCAC GGCCAATGCCAAGCAGGTGTTGGTGCTTGATGCCAAATATCGCCGAGCGCCTGACCAGCGGGTTCCGCAAAGTGCGCTTG ATGATGTCTATGCCTATCGTGGCAGCTTGGGCTACAATGGTCAGCCATGTGTGCTAGCCGCCGCAATTCTGTACCCACAA GCAAACACACTTGAGGAATTTGGCTCGATTGCGGCAATTGGCCTCATTCCCAATCAGCTTAATCAGCTAAAAACCTGGTT GGAGCGTTGGCTCAACCAGCTTGATCAATAA
Upstream 100 bases:
>100_bases TAAACGCGAATCAACTAGCCATTCTACGCGAAATTGTCGGGCGGGTGGCCCAAACCCTTGATCCTCAAGATTTGGCGGGC TTAGCAGGAGCAATCGGGCG
Downstream 100 bases:
>100_bases AAGGAACCGAATTCATGCCAGTCTATGAATATGTTTGTTCGGAATGCCAAGGGCGTTTTGCCCGCTTGGTACGAGGTTTT AGCGACCCCAGCGATTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MAELIPLTINGIDSQATVHVTASAWNEWAVVNMACPAQTNVRNAQLSIGADNLGVPQVSPFDPTWRWSWLPRGQAGTVYG RLQIEWADGEIQQQQFQFELQPHLLDRELWRALLNDLSSLARSLALRIASPSFAQAVLVPLLPDDPSPFLEALSLINQSS QQASQIVRSLQRQAKSTLERQPRTTDLGTAQQFKLDQLAQPSERYHVLEPYGLVPEQVQAEHAQASFDLPEHRWLIGLIQ QIERRLRNLRRLAREQRQLDLTSIQATIEQRLTALRQLRQAAPLAGLKARQQPVQSQLINRDARYRPIRQLARSLHEQPL LTLEVGSLALPLADVPTLYEQWCALAVAQVLAELGQVEAQHLLIDNPQRERWVLELNSATPLLSVRIGSQLWHLRYQARF SAQPDSDGFYSLDRYLRIPDLVLQTATANAKQVLVLDAKYRRAPDQRVPQSALDDVYAYRGSLGYNGQPCVLAAAILYPQ ANTLEEFGSIAAIGLIPNQLNQLKTWLERWLNQLDQ
Sequences:
>Translated_516_residues MAELIPLTINGIDSQATVHVTASAWNEWAVVNMACPAQTNVRNAQLSIGADNLGVPQVSPFDPTWRWSWLPRGQAGTVYG RLQIEWADGEIQQQQFQFELQPHLLDRELWRALLNDLSSLARSLALRIASPSFAQAVLVPLLPDDPSPFLEALSLINQSS QQASQIVRSLQRQAKSTLERQPRTTDLGTAQQFKLDQLAQPSERYHVLEPYGLVPEQVQAEHAQASFDLPEHRWLIGLIQ QIERRLRNLRRLAREQRQLDLTSIQATIEQRLTALRQLRQAAPLAGLKARQQPVQSQLINRDARYRPIRQLARSLHEQPL LTLEVGSLALPLADVPTLYEQWCALAVAQVLAELGQVEAQHLLIDNPQRERWVLELNSATPLLSVRIGSQLWHLRYQARF SAQPDSDGFYSLDRYLRIPDLVLQTATANAKQVLVLDAKYRRAPDQRVPQSALDDVYAYRGSLGYNGQPCVLAAAILYPQ ANTLEEFGSIAAIGLIPNQLNQLKTWLERWLNQLDQ >Mature_515_residues AELIPLTINGIDSQATVHVTASAWNEWAVVNMACPAQTNVRNAQLSIGADNLGVPQVSPFDPTWRWSWLPRGQAGTVYGR LQIEWADGEIQQQQFQFELQPHLLDRELWRALLNDLSSLARSLALRIASPSFAQAVLVPLLPDDPSPFLEALSLINQSSQ QASQIVRSLQRQAKSTLERQPRTTDLGTAQQFKLDQLAQPSERYHVLEPYGLVPEQVQAEHAQASFDLPEHRWLIGLIQQ IERRLRNLRRLAREQRQLDLTSIQATIEQRLTALRQLRQAAPLAGLKARQQPVQSQLINRDARYRPIRQLARSLHEQPLL TLEVGSLALPLADVPTLYEQWCALAVAQVLAELGQVEAQHLLIDNPQRERWVLELNSATPLLSVRIGSQLWHLRYQARFS AQPDSDGFYSLDRYLRIPDLVLQTATANAKQVLVLDAKYRRAPDQRVPQSALDDVYAYRGSLGYNGQPCVLAAAILYPQA NTLEEFGSIAAIGLIPNQLNQLKTWLERWLNQLDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58303; Mature: 58172
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELIPLTINGIDSQATVHVTASAWNEWAVVNMACPAQTNVRNAQLSIGADNLGVPQVSP CCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCC FDPTWRWSWLPRGQAGTVYGRLQIEWADGEIQQQQFQFELQPHLLDRELWRALLNDLSSL CCCCCEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ARSLALRIASPSFAQAVLVPLLPDDPSPFLEALSLINQSSQQASQIVRSLQRQAKSTLER HHHHHHHHCCCCHHHHEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QPRTTDLGTAQQFKLDQLAQPSERYHVLEPYGLVPEQVQAEHAQASFDLPEHRWLIGLIQ CCCCCCCCCHHHHCHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH QIERRLRNLRRLAREQRQLDLTSIQATIEQRLTALRQLRQAAPLAGLKARQQPVQSQLIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC RDARYRPIRQLARSLHEQPLLTLEVGSLALPLADVPTLYEQWCALAVAQVLAELGQVEAQ CCCCCHHHHHHHHHHHHCCEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLLIDNPQRERWVLELNSATPLLSVRIGSQLWHLRYQARFSAQPDSDGFYSLDRYLRIPD HHCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCHH LVLQTATANAKQVLVLDAKYRRAPDQRVPQSALDDVYAYRGSLGYNGQPCVLAAAILYPQ HHHHHCCCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC ANTLEEFGSIAAIGLIPNQLNQLKTWLERWLNQLDQ CCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AELIPLTINGIDSQATVHVTASAWNEWAVVNMACPAQTNVRNAQLSIGADNLGVPQVSP CCEEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCC FDPTWRWSWLPRGQAGTVYGRLQIEWADGEIQQQQFQFELQPHLLDRELWRALLNDLSSL CCCCCEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ARSLALRIASPSFAQAVLVPLLPDDPSPFLEALSLINQSSQQASQIVRSLQRQAKSTLER HHHHHHHHCCCCHHHHEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QPRTTDLGTAQQFKLDQLAQPSERYHVLEPYGLVPEQVQAEHAQASFDLPEHRWLIGLIQ CCCCCCCCCHHHHCHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH QIERRLRNLRRLAREQRQLDLTSIQATIEQRLTALRQLRQAAPLAGLKARQQPVQSQLIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC RDARYRPIRQLARSLHEQPLLTLEVGSLALPLADVPTLYEQWCALAVAQVLAELGQVEAQ CCCCCHHHHHHHHHHHHCCEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLLIDNPQRERWVLELNSATPLLSVRIGSQLWHLRYQARFSAQPDSDGFYSLDRYLRIPD HHCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCHH LVLQTATANAKQVLVLDAKYRRAPDQRVPQSALDDVYAYRGSLGYNGQPCVLAAAILYPQ HHHHHCCCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC ANTLEEFGSIAAIGLIPNQLNQLKTWLERWLNQLDQ CCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA