Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900660

Identifier: 159900660

GI number: 159900660

Start: 5295499

End: 5295762

Strand: Reverse

Name: 159900660

Synonym: Haur_4147

Alternate gene names: NA

Gene position: 5295762-5295499 (Counterclockwise)

Preceding gene: 159900661

Following gene: 159900658

Centisome position: 83.44

GC content: 49.62

Gene sequence:

>264_bases
GTGATGATGTATCACGTGCCACCAAGCTCGCCGTATGTGCCATGCCCTCGCTGCCAGAATCCACTACCCACCAAAGTAAC
CATGAGTTGGTGGGGTGGGATTGTTGGCCCAAAAATGGTCAACTTAGTCAAATGCCCGCAGTGCAAGCTACAATACAACG
GCAAAACCGGAGCTAGCGTCAGCAAATTTATTGTGATCTATGTTGGGGCTTGGGTGCTATTGTTTTTGATTGTGGTCGCG
GTGTTGTTTTTTGCCCAAGGCTAG

Upstream 100 bases:

>100_bases
GTATGCTCTTTACCGATTTAAGCAATCCAACTTCGAATAAAATCTATCAAGCGGTTGGCTTTCGGCCAGTATGCGATGTT
GATCAATATCGTTTTGAGGA

Downstream 100 bases:

>100_bases
ATTGGGGATGATCCCTCACCCCCTCGCCCGCCCAGCAGACGAGGGGAACCATTCTGAAATTGCACCTCTCGTTCGCCGCA
GTGGGCGAGGGGGCGAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASVSKFIVIYVGAWVLLFLIVVA
VLFFAQG

Sequences:

>Translated_87_residues
MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASVSKFIVIYVGAWVLLFLIVVA
VLFFAQG
>Mature_87_residues
MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASVSKFIVIYVGAWVLLFLIVVA
VLFFAQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9634; Mature: 9634

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASV
CEEEECCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCHH
SKFIVIYVGAWVLLFLIVVAVLFFAQG
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASV
CEEEECCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCHH
SKFIVIYVGAWVLLFLIVVAVLFFAQG
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA