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The map label for this gene is argS [H]

Identifier: 159900648

GI number: 159900648

Start: 5280847

End: 5282622

Strand: Reverse

Name: argS [H]

Synonym: Haur_4135

Alternate gene names: 159900648

Gene position: 5282622-5280847 (Counterclockwise)

Preceding gene: 159900649

Following gene: 159900647

Centisome position: 83.24

GC content: 50.11

Gene sequence:

>1776_bases
ATGTATACCTTTGCTCGCTTCGAGCAAGCCATTCGCGAGGCCTTGCTTGCCACCAATTTAATTAGCGCCGCCGATATTGA
TTTAGGCGCACCCAAAGCTGCTGGCGTACAGGCCGATTTAGCCTTGCCTTGTTTTCGTGCTGCCAAAAGCCGTGGCAGCA
CCCCTGCTCAAGTTGCCCAAGAATTAGTTGCCGCGCTGCAATTTGCCCCCGATAGTTTGGTTGCCAGTGCGACTATTTCT
GGCCCCTATGTTAATTTCAATCTCAACCCTCAAACCTTTGCTAAAGCCGTTTTGGCCGATATTCAGGCTGGCGGCGCAAC
CTATGGCAGTAGCACCAAGGGCAACAATCGCAAAGTAATTGTCGAATATTCATCGCCCAATATTGCCAAGCGTATGCACG
TTGGTCATATTCGCTCAACGATCATCGGCCAAGCGATTGCCAATCTCTACCAACGCTTGGGCTACGAAGTGATTCGCGAT
AATCACTTAGGCGATTATGGCAAACAATTCGGGGTCAATATTGCCGCCACCTTGCGTTTTGGCAAGCCCGAAGGCGAAGG
TGAGGCCGTGCTCGCAGCGATTGAAGAACAATACAAACGCTATAATTTGTTGATGAAGGGCGCAGTTGCCGAAGATACCG
AGTATGACCCTGATTCAGATGCTGGCTTGGATGATGAAGCCCGCGCTTGGTCGTTGAAATTAGAACAGGGCGATCCCCAA
GCAGTTGAAATTTGGCAATGGATGGTTGATTTGACCAAAACTGCCAATCAGCCCAATTATGATCGTTTGGGCGTGCATTT
CGATCTGCAACATGGCGAAAGTTTTTACAAAGATATGTTGGCCGAAATCATCAGCGATGCTGGCGAGAGTGAGCTGGCAG
AACGTGATGGCAATGCTATTATTGTCAAAGATTTACCCGACCATCGCGGCAAAAAATTACCAACCTTTTTGATTCAGCGC
TCGGATGGCGGCACGCTCTACATGACCCGCGATATTGCCACCATCAAATATCGTGAGCAAACTTACAATCCCGATGCGAT
GATTTACATTGTGGGTCAGCCACAAGAATTGCACTTCCGCCAAACCTTTGCCATCAGCAAGGCCTTGGGCTACACCGATG
CCGAGTTGATTCATATTTCGTTTGGTACGGTGTTTGATGCCAAGGGCCAGCCACTTTCAACCCGCAAGGGCAATATGATC
TATCTCGAAACCTTGCTGGATGAAGCCCGTAATCGCGCCAAAGCCTTGATTGAACAAAAAATGGCTGAAGGCAAAACTCA
ACTTACCGCCGAATTGATCGATCAAGTTGCCGAGCAAGTTGGGGTTGGCGCGGTGATGTACAACGATTTGTACCAAGATA
CCAAGCGCAATATCACCGTCGATTGGGATCGCATGTTGGCATTCGAGGGCAATAGCTCGCCCTATTTGCAATATATGCAT
GCTCGTTGCTGCTCGATTCTGCGCGATTTTGGCAAATTACCCGCTAGCTACGATGGCAGTTTGTTGAGCCATTCAGCTGA
AACTGGCTTGTTGAAAGAGCTTGCCCGTTTGCCACAAATTATTGAAGAAGCAGCGGCACGGTATGCGCCGTTCGTGGTCG
CCGATTGGCTGTATGCCACGGCGCGGGCCTTCTCGGCTTTCTACGATGCCTGTTCAGTGCTCAAAGCCGAAACGCCAGAG
TTACGGGTTGCACGTGGTCATGTAGTTGCCGCCACCGCCCAAGCGCTCCGCAATGGTTTAGCGTTGCTCTCAATTGCTGC
TCCTGAACGCATGTAA

Upstream 100 bases:

>100_bases
CCCCTCGCCTCGCGTGCGGGAGAGGGGGCTAGGGGGTGAGGGAAGGCGATTCATTGCCAACCGAATCAACCATTACAATT
AACCAATTGGAGTTTTAATA

Downstream 100 bases:

>100_bases
AAACGTGGCTGTAGGCTTTGGGCTATCGGCTTATTGGTGTACCTACCAATCGTCGATAGCCCAAAGCCTACAGCTAATCA
TCATATATTCGATGGATCAT

Product: arginyl-tRNA synthetase

Products: NA

Alternate protein names: Arginine--tRNA ligase; ArgRS [H]

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MYTFARFEQAIREALLATNLISAADIDLGAPKAAGVQADLALPCFRAAKSRGSTPAQVAQELVAALQFAPDSLVASATIS
GPYVNFNLNPQTFAKAVLADIQAGGATYGSSTKGNNRKVIVEYSSPNIAKRMHVGHIRSTIIGQAIANLYQRLGYEVIRD
NHLGDYGKQFGVNIAATLRFGKPEGEGEAVLAAIEEQYKRYNLLMKGAVAEDTEYDPDSDAGLDDEARAWSLKLEQGDPQ
AVEIWQWMVDLTKTANQPNYDRLGVHFDLQHGESFYKDMLAEIISDAGESELAERDGNAIIVKDLPDHRGKKLPTFLIQR
SDGGTLYMTRDIATIKYREQTYNPDAMIYIVGQPQELHFRQTFAISKALGYTDAELIHISFGTVFDAKGQPLSTRKGNMI
YLETLLDEARNRAKALIEQKMAEGKTQLTAELIDQVAEQVGVGAVMYNDLYQDTKRNITVDWDRMLAFEGNSSPYLQYMH
ARCCSILRDFGKLPASYDGSLLSHSAETGLLKELARLPQIIEEAAARYAPFVVADWLYATARAFSAFYDACSVLKAETPE
LRVARGHVVAATAQALRNGLALLSIAAPERM

Sequences:

>Translated_591_residues
MYTFARFEQAIREALLATNLISAADIDLGAPKAAGVQADLALPCFRAAKSRGSTPAQVAQELVAALQFAPDSLVASATIS
GPYVNFNLNPQTFAKAVLADIQAGGATYGSSTKGNNRKVIVEYSSPNIAKRMHVGHIRSTIIGQAIANLYQRLGYEVIRD
NHLGDYGKQFGVNIAATLRFGKPEGEGEAVLAAIEEQYKRYNLLMKGAVAEDTEYDPDSDAGLDDEARAWSLKLEQGDPQ
AVEIWQWMVDLTKTANQPNYDRLGVHFDLQHGESFYKDMLAEIISDAGESELAERDGNAIIVKDLPDHRGKKLPTFLIQR
SDGGTLYMTRDIATIKYREQTYNPDAMIYIVGQPQELHFRQTFAISKALGYTDAELIHISFGTVFDAKGQPLSTRKGNMI
YLETLLDEARNRAKALIEQKMAEGKTQLTAELIDQVAEQVGVGAVMYNDLYQDTKRNITVDWDRMLAFEGNSSPYLQYMH
ARCCSILRDFGKLPASYDGSLLSHSAETGLLKELARLPQIIEEAAARYAPFVVADWLYATARAFSAFYDACSVLKAETPE
LRVARGHVVAATAQALRNGLALLSIAAPERM
>Mature_591_residues
MYTFARFEQAIREALLATNLISAADIDLGAPKAAGVQADLALPCFRAAKSRGSTPAQVAQELVAALQFAPDSLVASATIS
GPYVNFNLNPQTFAKAVLADIQAGGATYGSSTKGNNRKVIVEYSSPNIAKRMHVGHIRSTIIGQAIANLYQRLGYEVIRD
NHLGDYGKQFGVNIAATLRFGKPEGEGEAVLAAIEEQYKRYNLLMKGAVAEDTEYDPDSDAGLDDEARAWSLKLEQGDPQ
AVEIWQWMVDLTKTANQPNYDRLGVHFDLQHGESFYKDMLAEIISDAGESELAERDGNAIIVKDLPDHRGKKLPTFLIQR
SDGGTLYMTRDIATIKYREQTYNPDAMIYIVGQPQELHFRQTFAISKALGYTDAELIHISFGTVFDAKGQPLSTRKGNMI
YLETLLDEARNRAKALIEQKMAEGKTQLTAELIDQVAEQVGVGAVMYNDLYQDTKRNITVDWDRMLAFEGNSSPYLQYMH
ARCCSILRDFGKLPASYDGSLLSHSAETGLLKELARLPQIIEEAAARYAPFVVADWLYATARAFSAFYDACSVLKAETPE
LRVARGHVVAATAQALRNGLALLSIAAPERM

Specific function: Unknown

COG id: COG0018

COG function: function code J; Arginyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI197100773, Length=527, Percent_Identity=32.6375711574953, Blast_Score=256, Evalue=5e-68,
Organism=Homo sapiens, GI15149476, Length=568, Percent_Identity=29.2253521126761, Blast_Score=229, Evalue=4e-60,
Organism=Escherichia coli, GI1788184, Length=608, Percent_Identity=34.8684210526316, Blast_Score=314, Evalue=1e-86,
Organism=Caenorhabditis elegans, GI71985061, Length=611, Percent_Identity=28.9689034369885, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI71985068, Length=572, Percent_Identity=29.8951048951049, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI17532153, Length=503, Percent_Identity=24.8508946322068, Blast_Score=123, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6320548, Length=567, Percent_Identity=34.9206349206349, Blast_Score=314, Evalue=3e-86,
Organism=Saccharomyces cerevisiae, GI6321883, Length=568, Percent_Identity=31.1619718309859, Blast_Score=284, Evalue=3e-77,
Organism=Drosophila melanogaster, GI18859963, Length=608, Percent_Identity=29.1118421052632, Blast_Score=226, Evalue=4e-59,
Organism=Drosophila melanogaster, GI28571570, Length=531, Percent_Identity=31.638418079096, Blast_Score=205, Evalue=6e-53,

Paralogues:

None

Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001412
- InterPro:   IPR001278
- InterPro:   IPR015945
- InterPro:   IPR005148
- InterPro:   IPR008909
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]

EC number: =6.1.1.19 [H]

Molecular weight: Translated: 65029; Mature: 65029

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTFARFEQAIREALLATNLISAADIDLGAPKAAGVQADLALPCFRAAKSRGSTPAQVAQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
ELVAALQFAPDSLVASATISGPYVNFNLNPQTFAKAVLADIQAGGATYGSSTKGNNRKVI
HHHHHHHCCCCHHEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
VEYSSPNIAKRMHVGHIRSTIIGQAIANLYQRLGYEVIRDNHLGDYGKQFGVNIAATLRF
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHCCEEEEEEEE
GKPEGEGEAVLAAIEEQYKRYNLLMKGAVAEDTEYDPDSDAGLDDEARAWSLKLEQGDPQ
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCH
AVEIWQWMVDLTKTANQPNYDRLGVHFDLQHGESFYKDMLAEIISDAGESELAERDGNAI
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHCCCCEE
IVKDLPDHRGKKLPTFLIQRSDGGTLYMTRDIATIKYREQTYNPDAMIYIVGQPQELHFR
EEECCCCCCCCCCCEEEEEECCCCEEEEEECEEEEEEECCCCCCCEEEEEECCCCHHHHH
QTFAISKALGYTDAELIHISFGTVFDAKGQPLSTRKGNMIYLETLLDEARNRAKALIEQK
HHHHHHHHCCCCCCEEEEEEECEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
MAEGKTQLTAELIDQVAEQVGVGAVMYNDLYQDTKRNITVDWDRMLAFEGNSSPYLQYMH
HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHEEEECCCCCHHHHHHH
ARCCSILRDFGKLPASYDGSLLSHSAETGLLKELARLPQIIEEAAARYAPFVVADWLYAT
HHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ARAFSAFYDACSVLKAETPELRVARGHVVAATAQALRNGLALLSIAAPERM
HHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure
MYTFARFEQAIREALLATNLISAADIDLGAPKAAGVQADLALPCFRAAKSRGSTPAQVAQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
ELVAALQFAPDSLVASATISGPYVNFNLNPQTFAKAVLADIQAGGATYGSSTKGNNRKVI
HHHHHHHCCCCHHEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
VEYSSPNIAKRMHVGHIRSTIIGQAIANLYQRLGYEVIRDNHLGDYGKQFGVNIAATLRF
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHCCEEEEEEEE
GKPEGEGEAVLAAIEEQYKRYNLLMKGAVAEDTEYDPDSDAGLDDEARAWSLKLEQGDPQ
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCH
AVEIWQWMVDLTKTANQPNYDRLGVHFDLQHGESFYKDMLAEIISDAGESELAERDGNAI
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHCCCCEE
IVKDLPDHRGKKLPTFLIQRSDGGTLYMTRDIATIKYREQTYNPDAMIYIVGQPQELHFR
EEECCCCCCCCCCCEEEEEECCCCEEEEEECEEEEEEECCCCCCCEEEEEECCCCHHHHH
QTFAISKALGYTDAELIHISFGTVFDAKGQPLSTRKGNMIYLETLLDEARNRAKALIEQK
HHHHHHHHCCCCCCEEEEEEECEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
MAEGKTQLTAELIDQVAEQVGVGAVMYNDLYQDTKRNITVDWDRMLAFEGNSSPYLQYMH
HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHEEEECCCCCHHHHHHH
ARCCSILRDFGKLPASYDGSLLSHSAETGLLKELARLPQIIEEAAARYAPFVVADWLYAT
HHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ARAFSAFYDACSVLKAETPELRVARGHVVAATAQALRNGLALLSIAAPERM
HHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA