Click here to switch to the map view.

The map label for this gene is 159900621

Identifier: 159900621

GI number: 159900621

Start: 5246181

End: 5246612

Strand: Reverse

Name: 159900621

Synonym: Haur_4108

Alternate gene names: NA

Gene position: 5246612-5246181 (Counterclockwise)

Preceding gene: 159900622

Following gene: 159900620

Centisome position: 82.67

GC content: 46.53

Gene sequence:

>432_bases
ATGCGGCTCTGGCGTAAAACAGTGGTACGGGCAACGCTCTTGTTCAGTGATTCTGGAGTGATGGTTGAAGCCTACGATGA
GTATATGTTTAGTGAAACTTCGCCGCCCTTAGTTGTCGGCAAATATCGCGAAATTCCTGCGCCGCGTGGTGCTGCGGTCT
TTGCGATTCAATTTACCCATGTGATCACCGAAATCTTTCAGACACTCCAAACATTTAAACTTCAATATTACTTGCCGCAA
CAACCTAATTCGTTTTTGGAAGATTATTTGAGCGGCCCAGGAGCTGATGCTGATTTATCGCTGCGGGCAGTCGCAACCGG
AGCCGATTCGCTTAATCGTGATCAAAAACGGGTAATTTGTACCTTATTATCGAAAAGTGACCCCCAAGCCTGGGAACGTT
CACGCGAATTTCGGCAACTGTTAGAAAAATAG

Upstream 100 bases:

>100_bases
AAAAAAGGCGTAGAATAGAGGACAATCGAAGGAGCAGGCGCTATCGTGGCGATAGCGTCCAACATTGTTGTACTCGACAC
ACGATTGTTCGGAGGATTGT

Downstream 100 bases:

>100_bases
GTGCTGGATGCCATTTGACTGTGGCAGCCAACGCCCTAGCCAAATTGACAATGACCCAAGATTTCACCATAATGGTGCAA
GATTCACTCATTGGACAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRLWRKTVVRATLLFSDSGVMVEAYDEYMFSETSPPLVVGKYREIPAPRGAAVFAIQFTHVITEIFQTLQTFKLQYYLPQ
QPNSFLEDYLSGPGADADLSLRAVATGADSLNRDQKRVICTLLSKSDPQAWERSREFRQLLEK

Sequences:

>Translated_143_residues
MRLWRKTVVRATLLFSDSGVMVEAYDEYMFSETSPPLVVGKYREIPAPRGAAVFAIQFTHVITEIFQTLQTFKLQYYLPQ
QPNSFLEDYLSGPGADADLSLRAVATGADSLNRDQKRVICTLLSKSDPQAWERSREFRQLLEK
>Mature_143_residues
MRLWRKTVVRATLLFSDSGVMVEAYDEYMFSETSPPLVVGKYREIPAPRGAAVFAIQFTHVITEIFQTLQTFKLQYYLPQ
QPNSFLEDYLSGPGADADLSLRAVATGADSLNRDQKRVICTLLSKSDPQAWERSREFRQLLEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16340; Mature: 16340

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWRKTVVRATLLFSDSGVMVEAYDEYMFSETSPPLVVGKYREIPAPRGAAVFAIQFTH
CCHHHHHHHHHHHEECCCCCEEEEHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEHHHHH
VITEIFQTLQTFKLQYYLPQQPNSFLEDYLSGPGADADLSLRAVATGADSLNRDQKRVIC
HHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHCCCHHHHHHH
TLLSKSDPQAWERSREFRQLLEK
HHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLWRKTVVRATLLFSDSGVMVEAYDEYMFSETSPPLVVGKYREIPAPRGAAVFAIQFTH
CCHHHHHHHHHHHEECCCCCEEEEHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEHHHHH
VITEIFQTLQTFKLQYYLPQQPNSFLEDYLSGPGADADLSLRAVATGADSLNRDQKRVIC
HHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHCCCHHHHHHH
TLLSKSDPQAWERSREFRQLLEK
HHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA