| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900608
Identifier: 159900608
GI number: 159900608
Start: 5226737
End: 5228713
Strand: Direct
Name: 159900608
Synonym: Haur_4095
Alternate gene names: NA
Gene position: 5226737-5228713 (Clockwise)
Preceding gene: 159900607
Following gene: 159900609
Centisome position: 82.36
GC content: 52.0
Gene sequence:
>1977_bases ATGCCTAAACATCCCACTCGCAGCCTCAGTTTTGGCCTTTTGATCATCGCGCTGGGCTTACGCTTCTTCCGCCTGAGCAG CCAAAGTTTATGGCTCGATGAAGGCGGTACCTGGAGCGAGGCTACTGGCCGTTCGTGGCTCAGTTTATTCGGCGATCTGT TTAGCCCACGCCAAAGCTACCCACTGTATCATTTGCTGATGAAGGCTTGGACGAGCGTGTTTGGCGATAGCGAGCTGGCC TTGCGTGCGCCTTCGGCGCTTGCTGGGACGCTGGCGGTGGTGTTGCTGTATCATTTGGCATGGCGTTTGAGCACACCCAC AGTGGCTTGGGTTGCGGCTGGCTTGTTGGCGATCAATCCGTTTGGTTTGTGGCAAAGCCAAGATGCCAAAGTCTATAGCA TGTTGATGGCGGCGGTGCTTTGGTCGAATCGAGTATTGCTCGATCTGCTTGATCAAACAAAACCGAAGCAGGTTTGGCTG TGGTTTGCCAGTGTGGTGCTCTGCCTAAGTTTGCATCGTTTGGCCTTGTTGCAAGTGCTCGGTCAAGTGTTGGTATTGGC GTTGCATTTCAGGCAAGCAGCCTGGCGCAAATGGCTTTGGCTTGGGTTTGGCTTGCTCAGTCTTGGTTTTGTGGCAGGAA TTATGTTTGGCTTGCGCCAAGACCCGAATGCACCGCCGATTGGCCGCACGATTGGGGCATTTCAAGCAGCTTGGCTTTTG CTTGGCCGCCTCAGTTTCGACCGTTCGAGCAGCGATTTAACTTGGCGTTTGTTGCCTGTGGGTTTAGCACTCGCCAGCGG TTTATGGCTGACATGGAGCCATCCACGGCGAAACATTATTTTAAGCTTGTGGCTCTTGCCCACGCTGCTCTTTTTGGCGG TATTGGCAGCAGGCTCGCCGCTCTACGAGCCACGCTATCTCAGTTTTAGCTTGCCGCTATTTTGCTTGATTTTGGCCTTA GGCTTGGCTGGTATTGCTCAACAACGCTGGCTAAGTGCTGGCAGTATCGTGGCGATTACAGGGTTAAGCGCTTGGTTGGT GTTTCAGCAGCCTTATGGCATTTGGAGCGGCAACGCGGTCAAGGAAGATTATCGTGGGGCCGTCCAAAGTTTGGCTGAGC ATGTTGCCCCTGATGATGTGATCATCGTGCAACCTCCCTATATTGCAACCTTGTATCAATATTATGCCAGTCGTGTTACA CCCGATGCGTTGCCTATTGCGCGTGGGTTTGGGCGCATCGGCGCAATTGGCTATGATCAAGGCGAGTTTGATAATGATTA TGCTGCGTTATTGGCAGGCCAACGCCGTGGCTGGCTGTTGATTGCACCCGAAAATGCCAAAGCGATCGATCCGCCTAACC CGCAATATCCCCAAGATGATATGGGCAAAGTTGGGATTAATTTTCTGACTGCTGATTTAAATGATAAATGGCGTTGCACC GATTTACCCTATTGGGAATTTAATGCATTGCGGATTTTGTGTCAGAGCTTTCCACGGCCAATGCAAGTCGAAAATTTGGC GCTGGTAGGCACATGGCCCATTCCCAAATCGGCGACTGCAACCTGGGATAATAGCTTACAACTTGAGGGCTACCAATTTC AAGCTTGGGCTGATGGCTATCAGGCAGGTGGCACATTGCCTGTGCAACTGGCTTGGCGCACCAACAACGTTTTAGTCAAA GATTATCGTTTATTTATTCATTTAGTGCCAGCGTTGGGTGCACCAGTTGCTGCCCAAGTTGATACGATGCCGCTCAATGG TGGTTTGCCAACCAGTCGCTGGCAGGCCAATCAAGCGATTCATGATCAAGTTTCTGTGCCCTTGCCCAAAAATCTTGCCA AAGGCCGCTATTTGGTCGTGCTCGGCTGGTATGATCCAACAATTACCGAGGTTGCGGCTCAGCGCTTGCCCGTGACAGCC AGCACCGCCCAGCATAGGGCCAACTACATCGAATTGGGCACGGTTGAGATCGAGTAA
Upstream 100 bases:
>100_bases AGTCGCTTGTTCATCGCCCTCAATTAAGCACTGAGCTAGCTGGCTTGGTGCTTTTTGCTGTTCAGGCCATTCATTTTTGT TAACGATTATCGAGCATCAT
Downstream 100 bases:
>100_bases TGATTTCAATTGTTTCGCCACCCTTCCGTCCCGCCACCGGCGGGAAACGCAGGGGGTTTTCATCCCCCTGCACCCCCTAA AGTTCAATTTGTGGATTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Oligosaccharyl Transferase STT3 Subunit
Number of amino acids: Translated: 658; Mature: 657
Protein sequence:
>658_residues MPKHPTRSLSFGLLIIALGLRFFRLSSQSLWLDEGGTWSEATGRSWLSLFGDLFSPRQSYPLYHLLMKAWTSVFGDSELA LRAPSALAGTLAVVLLYHLAWRLSTPTVAWVAAGLLAINPFGLWQSQDAKVYSMLMAAVLWSNRVLLDLLDQTKPKQVWL WFASVVLCLSLHRLALLQVLGQVLVLALHFRQAAWRKWLWLGFGLLSLGFVAGIMFGLRQDPNAPPIGRTIGAFQAAWLL LGRLSFDRSSSDLTWRLLPVGLALASGLWLTWSHPRRNIILSLWLLPTLLFLAVLAAGSPLYEPRYLSFSLPLFCLILAL GLAGIAQQRWLSAGSIVAITGLSAWLVFQQPYGIWSGNAVKEDYRGAVQSLAEHVAPDDVIIVQPPYIATLYQYYASRVT PDALPIARGFGRIGAIGYDQGEFDNDYAALLAGQRRGWLLIAPENAKAIDPPNPQYPQDDMGKVGINFLTADLNDKWRCT DLPYWEFNALRILCQSFPRPMQVENLALVGTWPIPKSATATWDNSLQLEGYQFQAWADGYQAGGTLPVQLAWRTNNVLVK DYRLFIHLVPALGAPVAAQVDTMPLNGGLPTSRWQANQAIHDQVSVPLPKNLAKGRYLVVLGWYDPTITEVAAQRLPVTA STAQHRANYIELGTVEIE
Sequences:
>Translated_658_residues MPKHPTRSLSFGLLIIALGLRFFRLSSQSLWLDEGGTWSEATGRSWLSLFGDLFSPRQSYPLYHLLMKAWTSVFGDSELA LRAPSALAGTLAVVLLYHLAWRLSTPTVAWVAAGLLAINPFGLWQSQDAKVYSMLMAAVLWSNRVLLDLLDQTKPKQVWL WFASVVLCLSLHRLALLQVLGQVLVLALHFRQAAWRKWLWLGFGLLSLGFVAGIMFGLRQDPNAPPIGRTIGAFQAAWLL LGRLSFDRSSSDLTWRLLPVGLALASGLWLTWSHPRRNIILSLWLLPTLLFLAVLAAGSPLYEPRYLSFSLPLFCLILAL GLAGIAQQRWLSAGSIVAITGLSAWLVFQQPYGIWSGNAVKEDYRGAVQSLAEHVAPDDVIIVQPPYIATLYQYYASRVT PDALPIARGFGRIGAIGYDQGEFDNDYAALLAGQRRGWLLIAPENAKAIDPPNPQYPQDDMGKVGINFLTADLNDKWRCT DLPYWEFNALRILCQSFPRPMQVENLALVGTWPIPKSATATWDNSLQLEGYQFQAWADGYQAGGTLPVQLAWRTNNVLVK DYRLFIHLVPALGAPVAAQVDTMPLNGGLPTSRWQANQAIHDQVSVPLPKNLAKGRYLVVLGWYDPTITEVAAQRLPVTA STAQHRANYIELGTVEIE >Mature_657_residues PKHPTRSLSFGLLIIALGLRFFRLSSQSLWLDEGGTWSEATGRSWLSLFGDLFSPRQSYPLYHLLMKAWTSVFGDSELAL RAPSALAGTLAVVLLYHLAWRLSTPTVAWVAAGLLAINPFGLWQSQDAKVYSMLMAAVLWSNRVLLDLLDQTKPKQVWLW FASVVLCLSLHRLALLQVLGQVLVLALHFRQAAWRKWLWLGFGLLSLGFVAGIMFGLRQDPNAPPIGRTIGAFQAAWLLL GRLSFDRSSSDLTWRLLPVGLALASGLWLTWSHPRRNIILSLWLLPTLLFLAVLAAGSPLYEPRYLSFSLPLFCLILALG LAGIAQQRWLSAGSIVAITGLSAWLVFQQPYGIWSGNAVKEDYRGAVQSLAEHVAPDDVIIVQPPYIATLYQYYASRVTP DALPIARGFGRIGAIGYDQGEFDNDYAALLAGQRRGWLLIAPENAKAIDPPNPQYPQDDMGKVGINFLTADLNDKWRCTD LPYWEFNALRILCQSFPRPMQVENLALVGTWPIPKSATATWDNSLQLEGYQFQAWADGYQAGGTLPVQLAWRTNNVLVKD YRLFIHLVPALGAPVAAQVDTMPLNGGLPTSRWQANQAIHDQVSVPLPKNLAKGRYLVVLGWYDPTITEVAAQRLPVTAS TAQHRANYIELGTVEIE
Specific function: Unknown
COG id: COG5305
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73000; Mature: 72869
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKHPTRSLSFGLLIIALGLRFFRLSSQSLWLDEGGTWSEATGRSWLSLFGDLFSPRQSY CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC PLYHLLMKAWTSVFGDSELALRAPSALAGTLAVVLLYHLAWRLSTPTVAWVAAGLLAINP CHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC FGLWQSQDAKVYSMLMAAVLWSNRVLLDLLDQTKPKQVWLWFASVVLCLSLHRLALLQVL CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GQVLVLALHFRQAAWRKWLWLGFGLLSLGFVAGIMFGLRQDPNAPPIGRTIGAFQAAWLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LGRLSFDRSSSDLTWRLLPVGLALASGLWLTWSHPRRNIILSLWLLPTLLFLAVLAAGSP HHHHCCCCCCCCCEEEHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC LYEPRYLSFSLPLFCLILALGLAGIAQQRWLSAGSIVAITGLSAWLVFQQPYGIWSGNAV CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCCCH KEDYRGAVQSLAEHVAPDDVIIVQPPYIATLYQYYASRVTPDALPIARGFGRIGAIGYDQ HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC GEFDNDYAALLAGQRRGWLLIAPENAKAIDPPNPQYPQDDMGKVGINFLTADLNDKWRCT CCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEC DLPYWEFNALRILCQSFPRPMQVENLALVGTWPIPKSATATWDNSLQLEGYQFQAWADGY CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCC QAGGTLPVQLAWRTNNVLVKDYRLFIHLVPALGAPVAAQVDTMPLNGGLPTSRWQANQAI CCCCCEEEEEEEECCCEEHHHHHHHHHHHHHCCCCCEEEEECEECCCCCCCCHHHHCHHH HDQVSVPLPKNLAKGRYLVVLGWYDPTITEVAAQRLPVTASTAQHRANYIELGTVEIE HHCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCEEEEEEEEEC >Mature Secondary Structure PKHPTRSLSFGLLIIALGLRFFRLSSQSLWLDEGGTWSEATGRSWLSLFGDLFSPRQSY CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC PLYHLLMKAWTSVFGDSELALRAPSALAGTLAVVLLYHLAWRLSTPTVAWVAAGLLAINP CHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC FGLWQSQDAKVYSMLMAAVLWSNRVLLDLLDQTKPKQVWLWFASVVLCLSLHRLALLQVL CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GQVLVLALHFRQAAWRKWLWLGFGLLSLGFVAGIMFGLRQDPNAPPIGRTIGAFQAAWLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LGRLSFDRSSSDLTWRLLPVGLALASGLWLTWSHPRRNIILSLWLLPTLLFLAVLAAGSP HHHHCCCCCCCCCEEEHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC LYEPRYLSFSLPLFCLILALGLAGIAQQRWLSAGSIVAITGLSAWLVFQQPYGIWSGNAV CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCCCH KEDYRGAVQSLAEHVAPDDVIIVQPPYIATLYQYYASRVTPDALPIARGFGRIGAIGYDQ HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC GEFDNDYAALLAGQRRGWLLIAPENAKAIDPPNPQYPQDDMGKVGINFLTADLNDKWRCT CCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEC DLPYWEFNALRILCQSFPRPMQVENLALVGTWPIPKSATATWDNSLQLEGYQFQAWADGY CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCC QAGGTLPVQLAWRTNNVLVKDYRLFIHLVPALGAPVAAQVDTMPLNGGLPTSRWQANQAI CCCCCEEEEEEEECCCEEHHHHHHHHHHHHHCCCCCEEEEECEECCCCCCCCHHHHCHHH HDQVSVPLPKNLAKGRYLVVLGWYDPTITEVAAQRLPVTASTAQHRANYIELGTVEIE HHCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA