The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900607

Identifier: 159900607

GI number: 159900607

Start: 5226296

End: 5226637

Strand: Direct

Name: 159900607

Synonym: Haur_4094

Alternate gene names: NA

Gene position: 5226296-5226637 (Clockwise)

Preceding gene: 159900604

Following gene: 159900608

Centisome position: 82.35

GC content: 48.83

Gene sequence:

>342_bases
ATGGCTGAACTGATCCAAGAAACCAATGGTAAGGTCTTGATCGTGCGTTTGCCTGCTCGCATGGACGCTGCGGCTGTTCG
TGAGCTCGAAGAACCATTTGCTCAATCGATTGCTGATCACAATGGGCCTGTATTGGTCGATGTAAGCAAAGTCGATTTTG
CGGCAAGCTTGGCCTTGCGCATGCTCATGATGAATTTGAAAGATCAGCAAAATCGCGGGCAAAATTTGATGCTGTTTGGC
TTGCAAACCCAAATTGCTGAGGTTTTCCGCAAAACCCGTTTCGATACGCTGTTTACAATTGCCGACGACGAAGCCAGCGG
CATTGAGCAACTGAGCGCCTAA

Upstream 100 bases:

>100_bases
CGCTATTTAATCGCATCCCTCTGTGCTTGGCTAGCGCTTCAGTGTATAATACCGCTTGTTTCCTGCTGTCTTTTGAACGA
CAACTATAGGGAGATTTCGT

Downstream 100 bases:

>100_bases
GTCGCTTGTTCATCGCCCTCAATTAAGCACTGAGCTAGCTGGCTTGGTGCTTTTTGCTGTTCAGGCCATTCATTTTTGTT
AACGATTATCGAGCATCATA

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Anti-Anti-Sigma Factor

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAELIQETNGKVLIVRLPARMDAAAVRELEEPFAQSIADHNGPVLVDVSKVDFAASLALRMLMMNLKDQQNRGQNLMLFG
LQTQIAEVFRKTRFDTLFTIADDEASGIEQLSA

Sequences:

>Translated_113_residues
MAELIQETNGKVLIVRLPARMDAAAVRELEEPFAQSIADHNGPVLVDVSKVDFAASLALRMLMMNLKDQQNRGQNLMLFG
LQTQIAEVFRKTRFDTLFTIADDEASGIEQLSA
>Mature_112_residues
AELIQETNGKVLIVRLPARMDAAAVRELEEPFAQSIADHNGPVLVDVSKVDFAASLALRMLMMNLKDQQNRGQNLMLFGL
QTQIAEVFRKTRFDTLFTIADDEASGIEQLSA

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12550; Mature: 12418

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELIQETNGKVLIVRLPARMDAAAVRELEEPFAQSIADHNGPVLVDVSKVDFAASLALR
CCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
MLMMNLKDQQNRGQNLMLFGLQTQIAEVFRKTRFDTLFTIADDEASGIEQLSA
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCC
>Mature Secondary Structure 
AELIQETNGKVLIVRLPARMDAAAVRELEEPFAQSIADHNGPVLVDVSKVDFAASLALR
CCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
MLMMNLKDQQNRGQNLMLFGLQTQIAEVFRKTRFDTLFTIADDEASGIEQLSA
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA