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The map label for this gene is wcaL [C]

Identifier: 159900596

GI number: 159900596

Start: 5216028

End: 5217227

Strand: Reverse

Name: wcaL [C]

Synonym: Haur_4083

Alternate gene names: 159900596

Gene position: 5217227-5216028 (Counterclockwise)

Preceding gene: 159900597

Following gene: 159900595

Centisome position: 82.21

GC content: 50.83

Gene sequence:

>1200_bases
ATGCGCGTCTTGATGTTGGCTTGGGAATATCCACCGCATATTGTTGGCGGGATGGGCAAGCATATTGCTGAGTTGGTTCC
AGTGCTTGATGCGGCTGGAATCGAAGTGCATGTGCTTACGCCATGGTTGCGTGGCGGCCCCCAACATGAGCGTTTTGGCA
TGCACAGCCATATTTGGCGGGTTCAGCCACCAGCCATGCCCGATTATGGCTTTGTTTCGTTTACCCAAGAAACCAACCGC
TATCTTGAGCGCTTCGCCCACGATTTGGGCAAAACCCATGGCCCATTTGATCTGATTCATGGCCATGATTGGCTGACCAG
CTATTGTAGCGTCGCTTTGAAATATGCTTGGCATACTCCCTTGATTACAACGATTCATGCAACTGAACGCGGGCGTGGAC
GTGGCTCGCTGGGCGGCGATCATGCCAAAACGATTAATGGCTTGGAATGGTGGTTGGCCCACGAAAGTTGGCGGGTAATT
GTGTGCAGCGATTTTATGGCCGACCAGTTGCATCAATTTTTTGGCACGCCCTTTGATAAACTCGATGTGATTGCCAACGG
CGTGAATGTGCCAACGATTGAATGGCCGAGCCAAGAGCGCCAGCAATTTCGCCAAAAATATGCCGCTGATAACGAAAAAG
TAGTGTTTAGCATTGCCCGCATGGTCTACGAAAAAGGCATTCAAGTGTTGGTTGAGGCAATTCCACATGTCTTGGCGCAA
CGCCGCGATATCAAATTTGTGATTGCGGGCATGGGGCCGTTAGCCGAACAATTGCGCAACCGCAGCCGTGAGCTTGGCAT
CGATGCACATGTTTATTGGACGGGCTTCGTGACCGATCAAGATCGCAATTATCTCTACAATGTTGCTGATGTGGCAGTAT
TTCCCAGCATCTACGAGCCATTTGGGATTGTAGCCTTGGAAGCGATGGCGGCACATTGCCCGGTCATTGTTTCGGATACT
GGTGGTTTGCGTGAGGTGGTGCAAATTCACGAAACAGGCTTAACGGTTTACCCTGATAACCCTGAATCGTTGGCTTGGGG
CATTTTGCATACGCTGTCCCACCCCGAATGGACCCAGCAACGAGTTGAAAATGCCTTCAAAACGGTGGTTGAGATTTATA
ATTGGCCATTAATTGCCTGCCAGACCCAAGCCGTCTATCAACGGGTTTGCGACGAGCGTGCAACTAGTATGTGGGGATGA

Upstream 100 bases:

>100_bases
TAGGCCTAGCGAAATTGCTAGGTTTATCGCCATTTAAACTTGGTATAATGGCCCAACAACGTTGTTTGAGACCTAACTCA
ATCATAGGAGTAGAGCATCC

Downstream 100 bases:

>100_bases
ATTGTATGAGCACTGAGGCATTTCAGGCTGGGGTTGCGGCGCTGAAAAGTGGCAATAAAGCCTTGGCCCGCGAACATCTG
ATGAAGGTTGTTGAGCAAGA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRVLMLAWEYPPHIVGGMGKHIAELVPVLDAAGIEVHVLTPWLRGGPQHERFGMHSHIWRVQPPAMPDYGFVSFTQETNR
YLERFAHDLGKTHGPFDLIHGHDWLTSYCSVALKYAWHTPLITTIHATERGRGRGSLGGDHAKTINGLEWWLAHESWRVI
VCSDFMADQLHQFFGTPFDKLDVIANGVNVPTIEWPSQERQQFRQKYAADNEKVVFSIARMVYEKGIQVLVEAIPHVLAQ
RRDIKFVIAGMGPLAEQLRNRSRELGIDAHVYWTGFVTDQDRNYLYNVADVAVFPSIYEPFGIVALEAMAAHCPVIVSDT
GGLREVVQIHETGLTVYPDNPESLAWGILHTLSHPEWTQQRVENAFKTVVEIYNWPLIACQTQAVYQRVCDERATSMWG

Sequences:

>Translated_399_residues
MRVLMLAWEYPPHIVGGMGKHIAELVPVLDAAGIEVHVLTPWLRGGPQHERFGMHSHIWRVQPPAMPDYGFVSFTQETNR
YLERFAHDLGKTHGPFDLIHGHDWLTSYCSVALKYAWHTPLITTIHATERGRGRGSLGGDHAKTINGLEWWLAHESWRVI
VCSDFMADQLHQFFGTPFDKLDVIANGVNVPTIEWPSQERQQFRQKYAADNEKVVFSIARMVYEKGIQVLVEAIPHVLAQ
RRDIKFVIAGMGPLAEQLRNRSRELGIDAHVYWTGFVTDQDRNYLYNVADVAVFPSIYEPFGIVALEAMAAHCPVIVSDT
GGLREVVQIHETGLTVYPDNPESLAWGILHTLSHPEWTQQRVENAFKTVVEIYNWPLIACQTQAVYQRVCDERATSMWG
>Mature_399_residues
MRVLMLAWEYPPHIVGGMGKHIAELVPVLDAAGIEVHVLTPWLRGGPQHERFGMHSHIWRVQPPAMPDYGFVSFTQETNR
YLERFAHDLGKTHGPFDLIHGHDWLTSYCSVALKYAWHTPLITTIHATERGRGRGSLGGDHAKTINGLEWWLAHESWRVI
VCSDFMADQLHQFFGTPFDKLDVIANGVNVPTIEWPSQERQQFRQKYAADNEKVVFSIARMVYEKGIQVLVEAIPHVLAQ
RRDIKFVIAGMGPLAEQLRNRSRELGIDAHVYWTGFVTDQDRNYLYNVADVAVFPSIYEPFGIVALEAMAAHCPVIVSDT
GGLREVVQIHETGLTVYPDNPESLAWGILHTLSHPEWTQQRVENAFKTVVEIYNWPLIACQTQAVYQRVCDERATSMWG

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=222, Percent_Identity=24.3243243243243, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 45382; Mature: 45382

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLMLAWEYPPHIVGGMGKHIAELVPVLDAAGIEVHVLTPWLRGGPQHERFGMHSHIWR
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCHHCCCHHCCEE
VQPPAMPDYGFVSFTQETNRYLERFAHDLGKTHGPFDLIHGHDWLTSYCSVALKYAWHTP
ECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHCCC
LITTIHATERGRGRGSLGGDHAKTINGLEWWLAHESWRVIVCSDFMADQLHQFFGTPFDK
EEEEEECCCCCCCCCCCCCCHHHHCCCHHEEEECCCCEEEEECHHHHHHHHHHHCCCHHH
LDVIANGVNVPTIEWPSQERQQFRQKYAADNEKVVFSIARMVYEKGIQVLVEAIPHVLAQ
HHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRDIKFVIAGMGPLAEQLRNRSRELGIDAHVYWTGFVTDQDRNYLYNVADVAVFPSIYEP
CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHHHCC
FGIVALEAMAAHCPVIVSDTGGLREVVQIHETGLTVYPDNPESLAWGILHTLSHPEWTQQ
HHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCHHHHH
RVENAFKTVVEIYNWPLIACQTQAVYQRVCDERATSMWG
HHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVLMLAWEYPPHIVGGMGKHIAELVPVLDAAGIEVHVLTPWLRGGPQHERFGMHSHIWR
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCHHCCCHHCCEE
VQPPAMPDYGFVSFTQETNRYLERFAHDLGKTHGPFDLIHGHDWLTSYCSVALKYAWHTP
ECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHCCC
LITTIHATERGRGRGSLGGDHAKTINGLEWWLAHESWRVIVCSDFMADQLHQFFGTPFDK
EEEEEECCCCCCCCCCCCCCHHHHCCCHHEEEECCCCEEEEECHHHHHHHHHHHCCCHHH
LDVIANGVNVPTIEWPSQERQQFRQKYAADNEKVVFSIARMVYEKGIQVLVEAIPHVLAQ
HHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRDIKFVIAGMGPLAEQLRNRSRELGIDAHVYWTGFVTDQDRNYLYNVADVAVFPSIYEP
CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHHHCC
FGIVALEAMAAHCPVIVSDTGGLREVVQIHETGLTVYPDNPESLAWGILHTLSHPEWTQQ
HHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCHHHHH
RVENAFKTVVEIYNWPLIACQTQAVYQRVCDERATSMWG
HHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]