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The map label for this gene is 159900595

Identifier: 159900595

GI number: 159900595

Start: 5214544

End: 5216022

Strand: Reverse

Name: 159900595

Synonym: Haur_4082

Alternate gene names: NA

Gene position: 5216022-5214544 (Counterclockwise)

Preceding gene: 159900596

Following gene: 159900594

Centisome position: 82.19

GC content: 46.86

Gene sequence:

>1479_bases
ATGAGCACTGAGGCATTTCAGGCTGGGGTTGCGGCGCTGAAAAGTGGCAATAAAGCCTTGGCCCGCGAACATCTGATGAA
GGTTGTTGAGCAAGACGAAACCAACGAACAAGCCTGGCTCTATCTGGCGGGGGCATTGGAAGATCCGGCTGAGATGCGAA
TTAGTTTAGAAAATGCGCTGCACATTAATCCGCAAAGTAAGCGAGCGCAACAGGGCTTAGAATGGCTGCGCAAGCAACAT
CCAGCGATTTTTGTTGAGCCAACACCAGCCTTGCCAGCAGCCACAGCACCTGCTTATACTGGGGCAACTGTGGCTTTGGC
TGATTTGCCATTAGCTGACAACCCACTACCAGACCAACCGATCACGCCAACGCCTTTTCCGGCGACCCAGCCGCTGGGTC
AAGCCTCGTTACCAGCGACCCAGCCGCTTGGGAACGGACCGTTGCCTGCAACCCAGCCATTGGCTCCCCCAGCCGTAGGC
GAAGTGCCCGATGTGTTGCCCTGCCCGCGCTGTGGTGCACCAACCCGCTATGTCGAGCAGCGTTGTCGCAAATGTGGGAT
GAACTTGACGATCAAAACCGAGCGCCAAACCCAATCTAAAATACCAATCCTGATTCCTGGCTTATTAAGCCTTCTACCAG
CATTATTATGGATATTTCTTGCTGGAAACATTTTTGTAAGAGCATTTGAGGAATATAGCGATTTTCAAGCCCAAGTTAGG
GTGATTGCACCAATGAATAAAATTGTATCCGAGGAAGAAAAAAAGATTCAAGATGAAAAAATTGCTGAGTTAGAAGAAGT
ATTGTTCGATTTTATTACGCCACCACTTAATATAGCTGTTAGCCTGTTATTAATTGGTATTTTTGGCATAATTATGGCAA
TCGCTTTAATGCGTCGTAAAAAATATGGTTTTTGGGGCACGTTAATATACAATGGTATCTTCTTATTTATATTTATTGCC
CTTATAGTGACCCTGAAGAGATTAGAGCTTTTGGATGAAGAATCCTCGCAACAAACCTTGCTCGATATATTACCATGGGC
CATGGAAAATCCAATCTTAGCAACCTATCTCATTTTTCTATTGGCTTGGGCCTATATTAATATTAATTTGCTCTTTATTG
CAGTAGGTTTGTATACGTTGATTGTGCTTATGCTTGGTTTTGCGTGGCGCACGATCTCGCAGAAGGCTGTGCGTTTTGTG
CCCCAATTCGAGGAGTTGGCCGAAGCCGATGGCCATTTCAATCGTGGAGTTGTCTATCAAAAGCGTGGGATGTGGTATCT
TTCTATGCTAGAGTGGGAACGAGCAGTTAAGCTTAACCCACGCGATTCGACCTATCGCCATGCCCTAGGCTTGATTTATG
AGCAGCTGAAGCGGCCTGCTGATGCCTTGCAGCAATTTGAGCAAGCCCTCACTGAAGATCCCAATAATCTGCGGATTAGC
CAAGATCGTGATCGTTTGGTGCAAACATTGCAAGCCTAG

Upstream 100 bases:

>100_bases
TGGTTGAGATTTATAATTGGCCATTAATTGCCTGCCAGACCCAAGCCGTCTATCAACGGGTTTGCGACGAGCGTGCAACT
AGTATGTGGGGATGAATTGT

Downstream 100 bases:

>100_bases
TCTGAGCCATGGCTTTCAATAAGCGAGGCATGCATGCCTGGAAATAGTTTTGGTCGGTTGTTCCGAATTTCAACATGGGG
CGAATCCCATGGAGTTGGCT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MSTEAFQAGVAALKSGNKALAREHLMKVVEQDETNEQAWLYLAGALEDPAEMRISLENALHINPQSKRAQQGLEWLRKQH
PAIFVEPTPALPAATAPAYTGATVALADLPLADNPLPDQPITPTPFPATQPLGQASLPATQPLGNGPLPATQPLAPPAVG
EVPDVLPCPRCGAPTRYVEQRCRKCGMNLTIKTERQTQSKIPILIPGLLSLLPALLWIFLAGNIFVRAFEEYSDFQAQVR
VIAPMNKIVSEEEKKIQDEKIAELEEVLFDFITPPLNIAVSLLLIGIFGIIMAIALMRRKKYGFWGTLIYNGIFLFIFIA
LIVTLKRLELLDEESSQQTLLDILPWAMENPILATYLIFLLAWAYININLLFIAVGLYTLIVLMLGFAWRTISQKAVRFV
PQFEELAEADGHFNRGVVYQKRGMWYLSMLEWERAVKLNPRDSTYRHALGLIYEQLKRPADALQQFEQALTEDPNNLRIS
QDRDRLVQTLQA

Sequences:

>Translated_492_residues
MSTEAFQAGVAALKSGNKALAREHLMKVVEQDETNEQAWLYLAGALEDPAEMRISLENALHINPQSKRAQQGLEWLRKQH
PAIFVEPTPALPAATAPAYTGATVALADLPLADNPLPDQPITPTPFPATQPLGQASLPATQPLGNGPLPATQPLAPPAVG
EVPDVLPCPRCGAPTRYVEQRCRKCGMNLTIKTERQTQSKIPILIPGLLSLLPALLWIFLAGNIFVRAFEEYSDFQAQVR
VIAPMNKIVSEEEKKIQDEKIAELEEVLFDFITPPLNIAVSLLLIGIFGIIMAIALMRRKKYGFWGTLIYNGIFLFIFIA
LIVTLKRLELLDEESSQQTLLDILPWAMENPILATYLIFLLAWAYININLLFIAVGLYTLIVLMLGFAWRTISQKAVRFV
PQFEELAEADGHFNRGVVYQKRGMWYLSMLEWERAVKLNPRDSTYRHALGLIYEQLKRPADALQQFEQALTEDPNNLRIS
QDRDRLVQTLQA
>Mature_491_residues
STEAFQAGVAALKSGNKALAREHLMKVVEQDETNEQAWLYLAGALEDPAEMRISLENALHINPQSKRAQQGLEWLRKQHP
AIFVEPTPALPAATAPAYTGATVALADLPLADNPLPDQPITPTPFPATQPLGQASLPATQPLGNGPLPATQPLAPPAVGE
VPDVLPCPRCGAPTRYVEQRCRKCGMNLTIKTERQTQSKIPILIPGLLSLLPALLWIFLAGNIFVRAFEEYSDFQAQVRV
IAPMNKIVSEEEKKIQDEKIAELEEVLFDFITPPLNIAVSLLLIGIFGIIMAIALMRRKKYGFWGTLIYNGIFLFIFIAL
IVTLKRLELLDEESSQQTLLDILPWAMENPILATYLIFLLAWAYININLLFIAVGLYTLIVLMLGFAWRTISQKAVRFVP
QFEELAEADGHFNRGVVYQKRGMWYLSMLEWERAVKLNPRDSTYRHALGLIYEQLKRPADALQQFEQALTEDPNNLRISQ
DRDRLVQTLQA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55112; Mature: 54981

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEAFQAGVAALKSGNKALAREHLMKVVEQDETNEQAWLYLAGALEDPAEMRISLENAL
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHEEHHHCE
HINPQSKRAQQGLEWLRKQHPAIFVEPTPALPAATAPAYTGATVALADLPLADNPLPDQP
ECCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
ITPTPFPATQPLGQASLPATQPLGNGPLPATQPLAPPAVGEVPDVLPCPRCGAPTRYVEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
RCRKCGMNLTIKTERQTQSKIPILIPGLLSLLPALLWIFLAGNIFVRAFEEYSDFQAQVR
HHHHCCCCEEEEECHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIAPMNKIVSEEEKKIQDEKIAELEEVLFDFITPPLNIAVSLLLIGIFGIIMAIALMRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KYGFWGTLIYNGIFLFIFIALIVTLKRLELLDEESSQQTLLDILPWAMENPILATYLIFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
LAWAYININLLFIAVGLYTLIVLMLGFAWRTISQKAVRFVPQFEELAEADGHFNRGVVYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
KRGMWYLSMLEWERAVKLNPRDSTYRHALGLIYEQLKRPADALQQFEQALTEDPNNLRIS
ECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEC
QDRDRLVQTLQA
CHHHHHHHHHCC
>Mature Secondary Structure 
STEAFQAGVAALKSGNKALAREHLMKVVEQDETNEQAWLYLAGALEDPAEMRISLENAL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHEEHHHCE
HINPQSKRAQQGLEWLRKQHPAIFVEPTPALPAATAPAYTGATVALADLPLADNPLPDQP
ECCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
ITPTPFPATQPLGQASLPATQPLGNGPLPATQPLAPPAVGEVPDVLPCPRCGAPTRYVEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
RCRKCGMNLTIKTERQTQSKIPILIPGLLSLLPALLWIFLAGNIFVRAFEEYSDFQAQVR
HHHHCCCCEEEEECHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIAPMNKIVSEEEKKIQDEKIAELEEVLFDFITPPLNIAVSLLLIGIFGIIMAIALMRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KYGFWGTLIYNGIFLFIFIALIVTLKRLELLDEESSQQTLLDILPWAMENPILATYLIFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
LAWAYININLLFIAVGLYTLIVLMLGFAWRTISQKAVRFVPQFEELAEADGHFNRGVVYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
KRGMWYLSMLEWERAVKLNPRDSTYRHALGLIYEQLKRPADALQQFEQALTEDPNNLRIS
ECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEC
QDRDRLVQTLQA
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA