Click here to switch to the map view.

The map label for this gene is yueF [H]

Identifier: 159900573

GI number: 159900573

Start: 5184765

End: 5185979

Strand: Direct

Name: yueF [H]

Synonym: Haur_4060

Alternate gene names: 159900573

Gene position: 5184765-5185979 (Clockwise)

Preceding gene: 159900572

Following gene: 159900574

Centisome position: 81.69

GC content: 46.58

Gene sequence:

>1215_bases
GTGGAGCCAAAAACACCAGAACCAATCATCAAAACAATCCCATCTTGGCGCGATTTAGCCCGTTGGACAATCACCGCATT
TGCGATTTGGCTGGTGGCGTGGTTGCTTTGGCGCACGGGAAATCAGCTCTTGCCGTTTGTAGTTGGTTTGGTGTTTGCCT
ATTTGCTCTTGCCCTTGGTCAACAAGTTAGAGCGCTGGATTCCGCGCTGGGCCGCGATTTTGGTGGTCTATATAGTTGGC
TTGGGAATTGTAACAGGCTCGATTCTCTATATTGTGCCGCCTGCAATCGACCAAGTGAATGGGTTTGGTAAATCATTGCC
TGAATTTTATAAAAACACCCTCGAACCCAAAATCAATGAAGGTCTAAAGTGGTATCGGAGCGAAGTGCCCGACGAGATTC
AAGAAGATATTGATAAGCAAGTGAGTAAAGGCATCACTACACTCAAAGAAAATGCTACTAATTATGTTGAAACAGGCGTG
AATGGAATTTTGAATGGCTTGGGGGTGATTTTTCAAACAATTATCTTCCTCGCAGGCTTTTTGATTATTCCATTTTGGCT
GTTTTATGTGCTGCTTGATGAACGCAAAGGCAAGGCAGCCCTGATTCGCATGATTCCCAAAGCGGTGCGAACCGATGTAT
TGACCGTGCTATCGATTTTTGATCGGGTGTTTTCGGCTTATATTCGGGGCCAATTAACGCTTGGCTTGATTATCGCAATT
ATGTCGTACATTGGCTTGTGGATTGTTGATTTGGTGATGCCTGGCGAAATTCCCTATAAATTGCTGTTGGCCTTGGTTGC
AGGCTTCACCGAATTAATTCCGGTGATTGGGCCGATTATTGGGGCAATTCCGGCGGTAATTGTTGGCTTAACCACCTCGT
TGCCAATGGGCTTAGTCGTCGCTGGCTTGTATATTGTGATTCAGCAAATTGAAAATAATTTCCTTGTGCCACGGATTATC
GGGGCAATTGTGGAAATTCATGAAGCAGTTTTGATGCTGCTGTTGGTGATTGCTGGTACAGTTTCGGGCTTGCTTGGGGT
AATTATTTTCGCCCCGATGGCGGCAGTGGCCCGCGATAGCTACCAATATATCACTGGTCGCTTGCGCCAACCCAACGATC
CACGCTATTTGCGAGCTGGCGAGTTGCCGTGGGAACATAAAGAAGAACCTGAAACGCCGATGCCGCCGATGTTGGCTTTG
CAAAATAAAGCCTGA

Upstream 100 bases:

>100_bases
TGGCTGGAATTTCTTCCAAATTTTTCGTACTATTACTGAGCGCGATGGCATAAGCCGCAGCGATCGTTGGGATAGCTATT
ATACGCAGTAGGGAGGCTTT

Downstream 100 bases:

>100_bases
TGGATGCTGCCCCTTGGTTTGTTCAAACGCCAAGGGGCAGTTGCTTAAGCTGATCGCCGAAGGTCACTGCATAACACCAC
TCATCGTAGTATAATAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MEPKTPEPIIKTIPSWRDLARWTITAFAIWLVAWLLWRTGNQLLPFVVGLVFAYLLLPLVNKLERWIPRWAAILVVYIVG
LGIVTGSILYIVPPAIDQVNGFGKSLPEFYKNTLEPKINEGLKWYRSEVPDEIQEDIDKQVSKGITTLKENATNYVETGV
NGILNGLGVIFQTIIFLAGFLIIPFWLFYVLLDERKGKAALIRMIPKAVRTDVLTVLSIFDRVFSAYIRGQLTLGLIIAI
MSYIGLWIVDLVMPGEIPYKLLLALVAGFTELIPVIGPIIGAIPAVIVGLTTSLPMGLVVAGLYIVIQQIENNFLVPRII
GAIVEIHEAVLMLLLVIAGTVSGLLGVIIFAPMAAVARDSYQYITGRLRQPNDPRYLRAGELPWEHKEEPETPMPPMLAL
QNKA

Sequences:

>Translated_404_residues
MEPKTPEPIIKTIPSWRDLARWTITAFAIWLVAWLLWRTGNQLLPFVVGLVFAYLLLPLVNKLERWIPRWAAILVVYIVG
LGIVTGSILYIVPPAIDQVNGFGKSLPEFYKNTLEPKINEGLKWYRSEVPDEIQEDIDKQVSKGITTLKENATNYVETGV
NGILNGLGVIFQTIIFLAGFLIIPFWLFYVLLDERKGKAALIRMIPKAVRTDVLTVLSIFDRVFSAYIRGQLTLGLIIAI
MSYIGLWIVDLVMPGEIPYKLLLALVAGFTELIPVIGPIIGAIPAVIVGLTTSLPMGLVVAGLYIVIQQIENNFLVPRII
GAIVEIHEAVLMLLLVIAGTVSGLLGVIIFAPMAAVARDSYQYITGRLRQPNDPRYLRAGELPWEHKEEPETPMPPMLAL
QNKA
>Mature_404_residues
MEPKTPEPIIKTIPSWRDLARWTITAFAIWLVAWLLWRTGNQLLPFVVGLVFAYLLLPLVNKLERWIPRWAAILVVYIVG
LGIVTGSILYIVPPAIDQVNGFGKSLPEFYKNTLEPKINEGLKWYRSEVPDEIQEDIDKQVSKGITTLKENATNYVETGV
NGILNGLGVIFQTIIFLAGFLIIPFWLFYVLLDERKGKAALIRMIPKAVRTDVLTVLSIFDRVFSAYIRGQLTLGLIIAI
MSYIGLWIVDLVMPGEIPYKLLLALVAGFTELIPVIGPIIGAIPAVIVGLTTSLPMGLVVAGLYIVIQQIENNFLVPRII
GAIVEIHEAVLMLLLVIAGTVSGLLGVIIFAPMAAVARDSYQYITGRLRQPNDPRYLRAGELPWEHKEEPETPMPPMLAL
QNKA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=337, Percent_Identity=24.9258160237389, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 44954; Mature: 44954

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPKTPEPIIKTIPSWRDLARWTITAFAIWLVAWLLWRTGNQLLPFVVGLVFAYLLLPLV
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
NKLERWIPRWAAILVVYIVGLGIVTGSILYIVPPAIDQVNGFGKSLPEFYKNTLEPKINE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHHHHHHHHCCCCHHHH
GLKWYRSEVPDEIQEDIDKQVSKGITTLKENATNYVETGVNGILNGLGVIFQTIIFLAGF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIIPFWLFYVLLDERKGKAALIRMIPKAVRTDVLTVLSIFDRVFSAYIRGQLTLGLIIAI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSYIGLWIVDLVMPGEIPYKLLLALVAGFTELIPVIGPIIGAIPAVIVGLTTSLPMGLVV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLYIVIQQIENNFLVPRIIGAIVEIHEAVLMLLLVIAGTVSGLLGVIIFAPMAAVARDS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQYITGRLRQPNDPRYLRAGELPWEHKEEPETPMPPMLALQNKA
HHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure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HHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]