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The map label for this gene is capM [H]

Identifier: 159900517

GI number: 159900517

Start: 5110163

End: 5111359

Strand: Reverse

Name: capM [H]

Synonym: Haur_4004

Alternate gene names: 159900517

Gene position: 5111359-5110163 (Counterclockwise)

Preceding gene: 159900518

Following gene: 159900515

Centisome position: 80.54

GC content: 53.63

Gene sequence:

>1197_bases
ATGAATCAACCTTTAGTGCTGCATATTGCAACTGCCGATATGGGCTTGCGCTTTTTACTGCTCGAACAGATGCAGGCAAT
TCATCATGCAGGCTATCAGGTACGCGGAGTTGCCAGCGATGGCCCCTATCGCGCCGAGGTTGAGGCCGCTGGAATTCCGG
TCGATGTGATCAAGATGCCTCGCGCAATTACTCCAAACCGCGATTTGTTAGCGCTAACCCAGCTTGTGCGTTTGTTTCGT
GAACTCAAACCAACGATTGTCCATACCCATAATCCTAAACCTGGTTTGCTTGGCCAGCTAGCAGCACGCATTGCTGGCGT
GCCAATTATTATCAACACCATTCATGGCTTTTATTTTCATGAGCATTCGAGCGCCAATCAGCGGCGCTTCTACATTGCCA
TGGAGAAAATAGCCGCCCGTTGTTCGCATGCAATTCTTTCGCAAAACCGCGAAGATCTCAACGCAGCGCTTGCGCTCAAG
ATTGCGCGGCCAGAGCAAATTAGCTTTTTGGGCAATGGCATCAATTTACAAGTGTTTGATCGGCGGGCCGTGAGCCAAGC
CGACATTCAAGCTGCCCGCCAAGAACTGGGTATTCCTGCTGATGCCCAAGTGATCGGAGCAGTTGGGCGTTTGGTTGCCG
AAAAGGGCTATCACGAGTTGTTTCAGGCGTGCCAACAACTGATGGCAACTCGCCCCAATTTACATTTGCTGGTGGTTGGC
CCCGAAGAACCAAATAAAGCCGATGGCCTGACCGCCGCAACCGCCGCCAAATATGGCATTGCTGAGCGCACCCATTTTGC
AGGCCTGCGCCGTGATATGCCGGTGCTGTATCGGTTGATGGATGTTTTGGCCCATCCTTCCTATCGCGAGGGCTTTCCGC
GTGCGCCAATGGAAGCGACCGCAATGGGTGTGCCAGTGGTTGCCAGCGATATTCGCGGTTGCCGCGAAACCGTGGTGCAT
AGCCTTAACGGCATGTTGGTGCCAGTGCGCGATGTAGCGGCCTTAGCACATAGCCTTGGCCGCATGATCGACGATCGGGT
GTTACGTGAGGCCTTTGCGCGGCTAACTCGGCGGGTTGCTCAGCGCGAGTTTGATCAACAACGGGTTTTTGATCGAGTGC
TGTTGACCTATGCCAAGCAATTACAAGCCCATGGAATGGCCGTGCCCGAACCAATTCAGAGCCAAGCCTCAACCTAA

Upstream 100 bases:

>100_bases
AAGCCCATCGCGATGGCAAAGAAACCGCAGATACCGTATTATGGTTACTACTGAACATCGAACTTTGGCAACGGATCTAT
CTTGATCGCGAGGAACGGCT

Downstream 100 bases:

>100_bases
TCGTGGCCTTGAATATATTTGGGCAGCATTTGCTCCCAATATGGCCAATCGTGAGCCCAACCATCCCAAACCCGCAGCGC
ATTGCCTACGCCATGATTCC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MNQPLVLHIATADMGLRFLLLEQMQAIHHAGYQVRGVASDGPYRAEVEAAGIPVDVIKMPRAITPNRDLLALTQLVRLFR
ELKPTIVHTHNPKPGLLGQLAARIAGVPIIINTIHGFYFHEHSSANQRRFYIAMEKIAARCSHAILSQNREDLNAALALK
IARPEQISFLGNGINLQVFDRRAVSQADIQAARQELGIPADAQVIGAVGRLVAEKGYHELFQACQQLMATRPNLHLLVVG
PEEPNKADGLTAATAAKYGIAERTHFAGLRRDMPVLYRLMDVLAHPSYREGFPRAPMEATAMGVPVVASDIRGCRETVVH
SLNGMLVPVRDVAALAHSLGRMIDDRVLREAFARLTRRVAQREFDQQRVFDRVLLTYAKQLQAHGMAVPEPIQSQAST

Sequences:

>Translated_398_residues
MNQPLVLHIATADMGLRFLLLEQMQAIHHAGYQVRGVASDGPYRAEVEAAGIPVDVIKMPRAITPNRDLLALTQLVRLFR
ELKPTIVHTHNPKPGLLGQLAARIAGVPIIINTIHGFYFHEHSSANQRRFYIAMEKIAARCSHAILSQNREDLNAALALK
IARPEQISFLGNGINLQVFDRRAVSQADIQAARQELGIPADAQVIGAVGRLVAEKGYHELFQACQQLMATRPNLHLLVVG
PEEPNKADGLTAATAAKYGIAERTHFAGLRRDMPVLYRLMDVLAHPSYREGFPRAPMEATAMGVPVVASDIRGCRETVVH
SLNGMLVPVRDVAALAHSLGRMIDDRVLREAFARLTRRVAQREFDQQRVFDRVLLTYAKQLQAHGMAVPEPIQSQAST
>Mature_398_residues
MNQPLVLHIATADMGLRFLLLEQMQAIHHAGYQVRGVASDGPYRAEVEAAGIPVDVIKMPRAITPNRDLLALTQLVRLFR
ELKPTIVHTHNPKPGLLGQLAARIAGVPIIINTIHGFYFHEHSSANQRRFYIAMEKIAARCSHAILSQNREDLNAALALK
IARPEQISFLGNGINLQVFDRRAVSQADIQAARQELGIPADAQVIGAVGRLVAEKGYHELFQACQQLMATRPNLHLLVVG
PEEPNKADGLTAATAAKYGIAERTHFAGLRRDMPVLYRLMDVLAHPSYREGFPRAPMEATAMGVPVVASDIRGCRETVVH
SLNGMLVPVRDVAALAHSLGRMIDDRVLREAFARLTRRVAQREFDQQRVFDRVLLTYAKQLQAHGMAVPEPIQSQAST

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43961; Mature: 43961

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPLVLHIATADMGLRFLLLEQMQAIHHAGYQVRGVASDGPYRAEVEAAGIPVDVIKMP
CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCHHHHHCC
RAITPNRDLLALTQLVRLFRELKPTIVHTHNPKPGLLGQLAARIAGVPIIINTIHGFYFH
CCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCEEEEHHHHHHEE
EHSSANQRRFYIAMEKIAARCSHAILSQNREDLNAALALKIARPEQISFLGNGINLQVFD
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCHHHHCCCCCEEEEEC
RRAVSQADIQAARQELGIPADAQVIGAVGRLVAEKGYHELFQACQQLMATRPNLHLLVVG
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEC
PEEPNKADGLTAATAAKYGIAERTHFAGLRRDMPVLYRLMDVLAHPSYREGFPRAPMEAT
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCCCHHH
AMGVPVVASDIRGCRETVVHSLNGMLVPVRDVAALAHSLGRMIDDRVLREAFARLTRRVA
HCCCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QREFDQQRVFDRVLLTYAKQLQAHGMAVPEPIQSQAST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC
>Mature Secondary Structure
MNQPLVLHIATADMGLRFLLLEQMQAIHHAGYQVRGVASDGPYRAEVEAAGIPVDVIKMP
CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCHHHHHCC
RAITPNRDLLALTQLVRLFRELKPTIVHTHNPKPGLLGQLAARIAGVPIIINTIHGFYFH
CCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCEEEEHHHHHHEE
EHSSANQRRFYIAMEKIAARCSHAILSQNREDLNAALALKIARPEQISFLGNGINLQVFD
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCHHHHCCCCCEEEEEC
RRAVSQADIQAARQELGIPADAQVIGAVGRLVAEKGYHELFQACQQLMATRPNLHLLVVG
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEC
PEEPNKADGLTAATAAKYGIAERTHFAGLRRDMPVLYRLMDVLAHPSYREGFPRAPMEAT
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCCCHHH
AMGVPVVASDIRGCRETVVHSLNGMLVPVRDVAALAHSLGRMIDDRVLREAFARLTRRVA
HCCCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QREFDQQRVFDRVLLTYAKQLQAHGMAVPEPIQSQAST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]