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The map label for this gene is 159900515

Identifier: 159900515

GI number: 159900515

Start: 5108510

End: 5109322

Strand: Reverse

Name: 159900515

Synonym: Haur_4002

Alternate gene names: NA

Gene position: 5109322-5108510 (Counterclockwise)

Preceding gene: 159900517

Following gene: 159900507

Centisome position: 80.51

GC content: 48.09

Gene sequence:

>813_bases
ATGGATTTTACTGCTGCACTGCCCGCCAACCCGCTCGAAAAACCTGGCTATCGCCTAGATTTTCAGGATGAATTTGCTAC
CGAGCAGCTTGATCAAGCCAAGTGGCTGCCCTATTATCTGCCGCAATGGAGTTCGCGTGAGCGTTCAACTCCTCGTTATC
ACCTTGCCAACCAGCGCCTAATCCTCGAAATTCAGGCTGATCAAGCGCCATGGTGTCCCGAATTCGATGCTCAAACTCGC
TGCTCATCGTTACAAACTGGGGTTTTTAGTGGAGCATTGGGCAGCCCAGATGGGCAACATCGCTTTAACCAAGCTTGTGT
AGTGCGCGAATTGCAAGATTCGATTCGCACCTATACCCCGCAGTATGGCTATTTTGAAATGCGAGCCAAAGCCACAATTG
GCCCAAATAATGTCGTCGCTTTGTGGATGATTGGCTTTGAAGATCAGCCCGAATATTCCGGCGAGCTGGCAATTATGGAG
ATTAAAGGCTGGAATATTGGCGCTACTGGCTTGAAATTAGGTTATGGTGTGCACCCTTGGGGCGATTCGCAGCTAACTGA
TGAGTTTTTTGAGGATGAAGTGGCGATCAAGGTAAGCGATTATCATATTTACGCTGCCGAATGGACACCCAGCCAAATCG
ATATTTATCTTGATAATCGTAAATTGCGCACAATTCAGCAATCGCCCAACTATCCGATGCAATTTATGCTGGGAATGTAT
GATTTGCCGCTGCGCCAACCAACCACCGCCCAGTATCCGCAGCAATTCGAAATTGATTATGTGCGTGGCTATCAGCCTTT
ACATGGCTATTAG

Upstream 100 bases:

>100_bases
TCACTGCGAGTATAGCATGAACCATTGCTGGCGGCTTAACAAAATCGCCAACGCAGGCTACAATAGCACAAATATGCTAT
AGGCTAAGGATGGCTTGACC

Downstream 100 bases:

>100_bases
CTGAGCAAGACTGCGCCGAAAGCGCAGTCTTGAACCATAAGCTAGGCCTGTGGTTTGTCGGCCTCATCCTTGCGTAGCCG
ATGTTTATCAATGATACCTG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: O-Glycosyl Hydrolase; Glycoside Hydrolase Family Protein; Endo-Beta-Galactosidase GlcNAc-Alpha-1 4-Gal-Releasing

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MDFTAALPANPLEKPGYRLDFQDEFATEQLDQAKWLPYYLPQWSSRERSTPRYHLANQRLILEIQADQAPWCPEFDAQTR
CSSLQTGVFSGALGSPDGQHRFNQACVVRELQDSIRTYTPQYGYFEMRAKATIGPNNVVALWMIGFEDQPEYSGELAIME
IKGWNIGATGLKLGYGVHPWGDSQLTDEFFEDEVAIKVSDYHIYAAEWTPSQIDIYLDNRKLRTIQQSPNYPMQFMLGMY
DLPLRQPTTAQYPQQFEIDYVRGYQPLHGY

Sequences:

>Translated_270_residues
MDFTAALPANPLEKPGYRLDFQDEFATEQLDQAKWLPYYLPQWSSRERSTPRYHLANQRLILEIQADQAPWCPEFDAQTR
CSSLQTGVFSGALGSPDGQHRFNQACVVRELQDSIRTYTPQYGYFEMRAKATIGPNNVVALWMIGFEDQPEYSGELAIME
IKGWNIGATGLKLGYGVHPWGDSQLTDEFFEDEVAIKVSDYHIYAAEWTPSQIDIYLDNRKLRTIQQSPNYPMQFMLGMY
DLPLRQPTTAQYPQQFEIDYVRGYQPLHGY
>Mature_270_residues
MDFTAALPANPLEKPGYRLDFQDEFATEQLDQAKWLPYYLPQWSSRERSTPRYHLANQRLILEIQADQAPWCPEFDAQTR
CSSLQTGVFSGALGSPDGQHRFNQACVVRELQDSIRTYTPQYGYFEMRAKATIGPNNVVALWMIGFEDQPEYSGELAIME
IKGWNIGATGLKLGYGVHPWGDSQLTDEFFEDEVAIKVSDYHIYAAEWTPSQIDIYLDNRKLRTIQQSPNYPMQFMLGMY
DLPLRQPTTAQYPQQFEIDYVRGYQPLHGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31179; Mature: 31179

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTAALPANPLEKPGYRLDFQDEFATEQLDQAKWLPYYLPQWSSRERSTPRYHLANQRL
CCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEECCCEE
ILEIQADQAPWCPEFDAQTRCSSLQTGVFSGALGSPDGQHRFNQACVVRELQDSIRTYTP
EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
QYGYFEMRAKATIGPNNVVALWMIGFEDQPEYSGELAIMEIKGWNIGATGLKLGYGVHPW
CCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCC
GDSQLTDEFFEDEVAIKVSDYHIYAAEWTPSQIDIYLDNRKLRTIQQSPNYPMQFMLGMY
CCCHHHHHHCCCEEEEEEEEEEEEEEECCCCEEEEEECCCEEEEECCCCCCCHHHHHHHH
DLPLRQPTTAQYPQQFEIDYVRGYQPLHGY
CCCCCCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MDFTAALPANPLEKPGYRLDFQDEFATEQLDQAKWLPYYLPQWSSRERSTPRYHLANQRL
CCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEECCCEE
ILEIQADQAPWCPEFDAQTRCSSLQTGVFSGALGSPDGQHRFNQACVVRELQDSIRTYTP
EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
QYGYFEMRAKATIGPNNVVALWMIGFEDQPEYSGELAIMEIKGWNIGATGLKLGYGVHPW
CCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCC
GDSQLTDEFFEDEVAIKVSDYHIYAAEWTPSQIDIYLDNRKLRTIQQSPNYPMQFMLGMY
CCCHHHHHHCCCEEEEEEEEEEEEEEECCCCEEEEEECCCEEEEECCCCCCCHHHHHHHH
DLPLRQPTTAQYPQQFEIDYVRGYQPLHGY
CCCCCCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA