| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159900458
Identifier: 159900458
GI number: 159900458
Start: 4942668
End: 4943201
Strand: Reverse
Name: 159900458
Synonym: Haur_3943
Alternate gene names: NA
Gene position: 4943201-4942668 (Counterclockwise)
Preceding gene: 159900459
Following gene: 159900457
Centisome position: 77.89
GC content: 47.75
Gene sequence:
>534_bases ATGCTCAAGCTACAAAAAAAGCGTAAACAAGCAGGCCAAGCCTTGGTTGAATTTGCGCTCACGATAACAGTGTTATTCAC GTTTCTTTCAGGCATTATTGATGGTGCTCTGGCCTTTTTTGCCTACCAAGGGCTGAAGGGCGCTGCCTATGAAGCGGTTT CATATGGCTCGTTGTTCCCACTGCGCAGCGATGGAACGATCAATACTCAAGAAATCCGCGACCGATTGCGCTATGAGAGT GGTGCGCCAAACAATAATTCCGGTTTACGCTACGTTAATTTATTTGATCTTGATAATAGTGGAGGCCCCGATCCTGAGGG TGTCCTAAACCAGCGGATTCAAATTAGCTTTGTTGATGGGGCTGTAGCTGGAACAAGCCCACTCAATTGTGCGAACCCAG CAACTCTAGCACGGCAGTTTTGCGATATTCGGGTGAGTGTACGCTACACCTACCGATCATTTTTTTTCGCGGCTTCAATC TTTGGAGCTGACACGATCGACCTAACCGCAACCCAACAACAAACCATACCCTAG
Upstream 100 bases:
>100_bases GTTGAAATTGATGCAACCTCACGCCGCACGATTGTCCGCTATGATTTTTCGAGTATTGATCCGCTGTCTGTTTGCCGTTA ATCAATGAGGGTATCTGACC
Downstream 100 bases:
>100_bases TTAATACTTATCACGATCCGTGGTATTGATTTTTACTTTTACGGAGGATTGGCTATGAACTTAAGTCGCATGACGCGACG TGTAGCCCAACCAGTCGCAG
Product: TadE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFPLRSDGTINTQEIRDRLRYES GAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDGAVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASI FGADTIDLTATQQQTIP
Sequences:
>Translated_177_residues MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFPLRSDGTINTQEIRDRLRYES GAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDGAVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASI FGADTIDLTATQQQTIP >Mature_177_residues MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFPLRSDGTINTQEIRDRLRYES GAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDGAVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASI FGADTIDLTATQQQTIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19321; Mature: 19321
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCE LRSDGTINTQEIRDRLRYESGAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDG ECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCEEEEEECC AVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASIFGADTIDLTATQQQTIP CCCCCCCCCCCCHHHHHHHHHCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCC >Mature Secondary Structure MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCE LRSDGTINTQEIRDRLRYESGAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDG ECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCEEEEEECC AVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASIFGADTIDLTATQQQTIP CCCCCCCCCCCCHHHHHHHHHCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA