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The map label for this gene is rsmI [H]

Identifier: 159900434

GI number: 159900434

Start: 4912332

End: 4913225

Strand: Reverse

Name: rsmI [H]

Synonym: Haur_3919

Alternate gene names: 159900434

Gene position: 4913225-4912332 (Counterclockwise)

Preceding gene: 159900435

Following gene: 159900433

Centisome position: 77.42

GC content: 52.24

Gene sequence:

>894_bases
ATGGCTGTACTGTATGTGGTTGCCACGCCAATTGGTAACCTTGAAGATATTAGCCCACGTGGCTTGCGAATTTTGCAAGA
GGTTGGCTTGATTGCCGCTGAAGACACTCGCCACACCCGCAAATTATTGCAACGCTATCAGATTGAAACGCGGTTGATCG
CCTACCATGAGCATAACAAACTAGCCCGTTTGAATACGATTTTGCTGGCTTTGGCCAACGGCGATGATGTGGCGTTGGTT
AGTGATGCTGGCACGCCAGCGATCTCTGACCCTGGCTACGAGTTGGTTGGCGCAGTAATCGAGGCTGGATTTGTGGTTGT
GCCAATTCCTGGGCCAAGCGCGGTAATTACAGGCTTGAGTGCTTCGGGTCTGCCAACCGATCGCTTTTATTACTTGGGCT
TTCCGCCGCGCCGTTCCAAAGAGCGTTGTGCGTTGTTCAGCGAGGTTGTCGATATTCCGGCAACCTTGGTACTGTATGAA
GCTCCGCATCGGATTTGCGAAAGTTTGGCCGATGCTCTTAGCGTTTTAGGTGATCGCCCTGCTGCCGTAGCGCGTGAATT
AACCAAACTTCACGAGCAATTCGTCCGTGGCACGCTCAGCGAATTGCTGGCCCATTTCAATGCGACTGAGCCACGCGGCG
AGTTCGTGCTGATGATCGGCGGAGCCACGCGGCCTGCCAAACGCAAACCAAGCAGCACTTCAACCAATGAACTTGGAGTT
GCGGTTACAACCGATGAAGCTCCAGTCGCAGTCGATTGGGATTTGATTCGGAGTGAGTTGCAACGCTTGCGGGCTGAAGG
TTGGACGGGAACTAAAGCTGCCAAACATCTGGCCAAACACTATGAGCTTGATCGCCATCAAGTATATAGTGAATGGAGCA
ACTTGCCAGAATAA

Upstream 100 bases:

>100_bases
GTTGCATCACCCCGACATCGGCGGTAGCATCGAACGCATGCAATTGTGGAATAGCCTGTTGGATCAGATTGAGCAAGGAA
ACTAGCGACGAAGGAAGGTT

Downstream 100 bases:

>100_bases
GCCCAATCGCTTTGAAACTTGTTCATAATGCTCTTAGGCAATATTTTGGGATGATAATAATCCACGGAATATATTTTAGG
GGGTGCAGGGGGATGAAAAC

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MAVLYVVATPIGNLEDISPRGLRILQEVGLIAAEDTRHTRKLLQRYQIETRLIAYHEHNKLARLNTILLALANGDDVALV
SDAGTPAISDPGYELVGAVIEAGFVVVPIPGPSAVITGLSASGLPTDRFYYLGFPPRRSKERCALFSEVVDIPATLVLYE
APHRICESLADALSVLGDRPAAVARELTKLHEQFVRGTLSELLAHFNATEPRGEFVLMIGGATRPAKRKPSSTSTNELGV
AVTTDEAPVAVDWDLIRSELQRLRAEGWTGTKAAKHLAKHYELDRHQVYSEWSNLPE

Sequences:

>Translated_297_residues
MAVLYVVATPIGNLEDISPRGLRILQEVGLIAAEDTRHTRKLLQRYQIETRLIAYHEHNKLARLNTILLALANGDDVALV
SDAGTPAISDPGYELVGAVIEAGFVVVPIPGPSAVITGLSASGLPTDRFYYLGFPPRRSKERCALFSEVVDIPATLVLYE
APHRICESLADALSVLGDRPAAVARELTKLHEQFVRGTLSELLAHFNATEPRGEFVLMIGGATRPAKRKPSSTSTNELGV
AVTTDEAPVAVDWDLIRSELQRLRAEGWTGTKAAKHLAKHYELDRHQVYSEWSNLPE
>Mature_296_residues
AVLYVVATPIGNLEDISPRGLRILQEVGLIAAEDTRHTRKLLQRYQIETRLIAYHEHNKLARLNTILLALANGDDVALVS
DAGTPAISDPGYELVGAVIEAGFVVVPIPGPSAVITGLSASGLPTDRFYYLGFPPRRSKERCALFSEVVDIPATLVLYEA
PHRICESLADALSVLGDRPAAVARELTKLHEQFVRGTLSELLAHFNATEPRGEFVLMIGGATRPAKRKPSSTSTNELGVA
VTTDEAPVAVDWDLIRSELQRLRAEGWTGTKAAKHLAKHYELDRHQVYSEWSNLPE

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=221, Percent_Identity=52.4886877828054, Blast_Score=211, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32487; Mature: 32356

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLYVVATPIGNLEDISPRGLRILQEVGLIAAEDTRHTRKLLQRYQIETRLIAYHEHNK
CEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHEEEEECCCH
LARLNTILLALANGDDVALVSDAGTPAISDPGYELVGAVIEAGFVVVPIPGPSAVITGLS
HHHEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCHHEECCC
ASGLPTDRFYYLGFPPRRSKERCALFSEVVDIPATLVLYEAPHRICESLADALSVLGDRP
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHCCCH
AAVARELTKLHEQFVRGTLSELLAHFNATEPRGEFVLMIGGATRPAKRKPSSTSTNELGV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEE
AVTTDEAPVAVDWDLIRSELQRLRAEGWTGTKAAKHLAKHYELDRHQVYSEWSNLPE
EEECCCCCEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVLYVVATPIGNLEDISPRGLRILQEVGLIAAEDTRHTRKLLQRYQIETRLIAYHEHNK
EEEEEEECCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHEEEEECCCH
LARLNTILLALANGDDVALVSDAGTPAISDPGYELVGAVIEAGFVVVPIPGPSAVITGLS
HHHEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCHHEECCC
ASGLPTDRFYYLGFPPRRSKERCALFSEVVDIPATLVLYEAPHRICESLADALSVLGDRP
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHCCCH
AAVARELTKLHEQFVRGTLSELLAHFNATEPRGEFVLMIGGATRPAKRKPSSTSTNELGV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEE
AVTTDEAPVAVDWDLIRSELQRLRAEGWTGTKAAKHLAKHYELDRHQVYSEWSNLPE
EEECCCCCEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]