| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900376
Identifier: 159900376
GI number: 159900376
Start: 4849564
End: 4850613
Strand: Reverse
Name: 159900376
Synonym: Haur_3861
Alternate gene names: NA
Gene position: 4850613-4849564 (Counterclockwise)
Preceding gene: 159900377
Following gene: 159900375
Centisome position: 76.43
GC content: 45.62
Gene sequence:
>1050_bases ATGAATCGTTCAAGCTCACTATTCACATTATTAATCGTGGCAATCTTATTGATTCCAACATCATCACAAGCAACCACGAG TACCTCAACTCGCCGCTTTATCGATCAGCCTTGGCTGAATCTTTATTATACAAATTTGGTATGGGAAGATACGGGTAAAT GTCGGGCGATGTTCCGCGTGAAAACTACGGATTTATGCACCCATGGCCCTGATTCGCCTGAACCTCAAATGGCTAAAAGT TGGGCTGAAGAATTATTTTATCCTAACAATCAAATGCATTTGTCAATAGAGCAATCATCCCAACCTTGCCTTGACGATAG TACCAACGACTATCGAACTCAAGTTTTATATGTGCGGGCTAGCGATGCCCAAGATAATAGCTCGATCATCGCGCCCGTTT TACGCAAGCATTTATTGGGTGTAAACGAAATCTATAACCAAAGTGCCCAATTAACTGGTGGTCAGCGCCATATTCGTTGG CAACTTAACCAAGCCTGCCAAATTGACGTGCAGCATGTGGTTATTCCGCCAGCAGCCGATGATGATTTTGGCGCAACGAT CAATGCCGTGGTGGCCCAAGGCTTCAATCGTGATGATCGTAAATATGTGATGTTTGTTGAAGCCCGCTATTACTGTGGGA TTGCCACGGTGCAGCACGATACGCAACCAAGCAGTGCCAATTTAAATAACCATAGCGTAGCCTATGCCCGGATTGATGCT GGCTGTTGGAATGCTCGCGTAGTCGCTCACGAACATATGCATATGATTGGTGGAGTTCAGCCAAGTGCGCCGCATACCAC CAAGAGTTGGCATTGCACCGATGAATGGGACATTATGTGCTACTCCGATGCACCGTCGTATCCAGATTTAGAAATCGCCT GCCCTGAGCATAGCATTCGTGATATTTTCGATTGTGGCAATGATGATTATTTTCATACCAACCCAGCCGCCGATAATTAC CTTGCCAGCAATTGGAATAGCGCCAATAGCCTATTTTTGAGCCAACAAAGCCAATATTGGCGGATCTATCTGCCGATTGC CAGCAATTGA
Upstream 100 bases:
>100_bases GGTGGCGTTAGGCTTTTATGGTGATTTTTGCCGTAGTACCCGCCCAAAATGCCTCCATTGTGGCTCTATCTCAGGTAGAG TAAAACAAATGGAGGCGTTT
Downstream 100 bases:
>100_bases ACGGGCCGGACTACCCATGCCAGTCCTTGTTAGAACTAGTAGTAGTACAGTGCTGATAAGTGCCTTGTAGTGCAGGCGAG ATATGCCTTTAGGGCTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNRSSSLFTLLIVAILLIPTSSQATTSTSTRRFIDQPWLNLYYTNLVWEDTGKCRAMFRVKTTDLCTHGPDSPEPQMAKS WAEELFYPNNQMHLSIEQSSQPCLDDSTNDYRTQVLYVRASDAQDNSSIIAPVLRKHLLGVNEIYNQSAQLTGGQRHIRW QLNQACQIDVQHVVIPPAADDDFGATINAVVAQGFNRDDRKYVMFVEARYYCGIATVQHDTQPSSANLNNHSVAYARIDA GCWNARVVAHEHMHMIGGVQPSAPHTTKSWHCTDEWDIMCYSDAPSYPDLEIACPEHSIRDIFDCGNDDYFHTNPAADNY LASNWNSANSLFLSQQSQYWRIYLPIASN
Sequences:
>Translated_349_residues MNRSSSLFTLLIVAILLIPTSSQATTSTSTRRFIDQPWLNLYYTNLVWEDTGKCRAMFRVKTTDLCTHGPDSPEPQMAKS WAEELFYPNNQMHLSIEQSSQPCLDDSTNDYRTQVLYVRASDAQDNSSIIAPVLRKHLLGVNEIYNQSAQLTGGQRHIRW QLNQACQIDVQHVVIPPAADDDFGATINAVVAQGFNRDDRKYVMFVEARYYCGIATVQHDTQPSSANLNNHSVAYARIDA GCWNARVVAHEHMHMIGGVQPSAPHTTKSWHCTDEWDIMCYSDAPSYPDLEIACPEHSIRDIFDCGNDDYFHTNPAADNY LASNWNSANSLFLSQQSQYWRIYLPIASN >Mature_349_residues MNRSSSLFTLLIVAILLIPTSSQATTSTSTRRFIDQPWLNLYYTNLVWEDTGKCRAMFRVKTTDLCTHGPDSPEPQMAKS WAEELFYPNNQMHLSIEQSSQPCLDDSTNDYRTQVLYVRASDAQDNSSIIAPVLRKHLLGVNEIYNQSAQLTGGQRHIRW QLNQACQIDVQHVVIPPAADDDFGATINAVVAQGFNRDDRKYVMFVEARYYCGIATVQHDTQPSSANLNNHSVAYARIDA GCWNARVVAHEHMHMIGGVQPSAPHTTKSWHCTDEWDIMCYSDAPSYPDLEIACPEHSIRDIFDCGNDDYFHTNPAADNY LASNWNSANSLFLSQQSQYWRIYLPIASN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39492; Mature: 39492
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSSSLFTLLIVAILLIPTSSQATTSTSTRRFIDQPWLNLYYTNLVWEDTGKCRAMFRV CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEE KTTDLCTHGPDSPEPQMAKSWAEELFYPNNQMHLSIEQSSQPCLDDSTNDYRTQVLYVRA EEHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEE SDAQDNSSIIAPVLRKHLLGVNEIYNQSAQLTGGQRHIRWQLNQACQIDVQHVVIPPAAD CCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCC DDFGATINAVVAQGFNRDDRKYVMFVEARYYCGIATVQHDTQPSSANLNNHSVAYARIDA CCCCCHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEC GCWNARVVAHEHMHMIGGVQPSAPHTTKSWHCTDEWDIMCYSDAPSYPDLEIACPEHSIR CCCCEEEEHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCEEEECCCCHHH DIFDCGNDDYFHTNPAADNYLASNWNSANSLFLSQQSQYWRIYLPIASN HHHHCCCCCCEECCCCCCCHHHCCCCCCCEEEEECCCCEEEEEEEECCC >Mature Secondary Structure MNRSSSLFTLLIVAILLIPTSSQATTSTSTRRFIDQPWLNLYYTNLVWEDTGKCRAMFRV CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEE KTTDLCTHGPDSPEPQMAKSWAEELFYPNNQMHLSIEQSSQPCLDDSTNDYRTQVLYVRA EEHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEE SDAQDNSSIIAPVLRKHLLGVNEIYNQSAQLTGGQRHIRWQLNQACQIDVQHVVIPPAAD CCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCC DDFGATINAVVAQGFNRDDRKYVMFVEARYYCGIATVQHDTQPSSANLNNHSVAYARIDA CCCCCHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEC GCWNARVVAHEHMHMIGGVQPSAPHTTKSWHCTDEWDIMCYSDAPSYPDLEIACPEHSIR CCCCEEEEHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCEEEECCCCHHH DIFDCGNDDYFHTNPAADNYLASNWNSANSLFLSQQSQYWRIYLPIASN HHHHCCCCCCEECCCCCCCHHHCCCCCCCEEEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA