| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900368
Identifier: 159900368
GI number: 159900368
Start: 4835679
End: 4836680
Strand: Reverse
Name: 159900368
Synonym: Haur_3851
Alternate gene names: NA
Gene position: 4836680-4835679 (Counterclockwise)
Preceding gene: 159900369
Following gene: 159900367
Centisome position: 76.21
GC content: 49.4
Gene sequence:
>1002_bases ATGACCGCCGAAATCGTTCAAGCTCAATTTGAGCAGCTTGAGCAAATCGCCAGCCGTTTCAACCGCCAAGCCGAACAAAG TGAATCGATCACCCAAAGTATTCGTCAAGTGCACGATGCTTTAGTTGGCGGCCAATGGCAAGGCGATGCCGCCAAAGCCT TTGCCAATGAAATGCAAAGCAATGTTTTTCCGGCCTTTAGGCGCCTAACCGCTGCCCTCCGCGAGAGTCAAGCAGTTACC TTACAAATCAAAAACCTGATGCGCCAGGCCGAAGAAGAAGCCGCCCGCTTGTTTCAAGGGCCGCTGACCGAAGGCGATGC CGCAGCAAAACCTGCTGGAGGACAGCCTAATAGCAATACTACCCAATTTACAGCCGAAGAAACACCAACGCCAACCCCAC CTGCCGACCCTAACAACTACGATCGCTTTGATCAAACCTTGCAATACATGCATCAAGAGATGATCACCAATGCCCAAAGC GAAACTGTAGGCATGATCAAATCGTTGCTCGACTCATTTAGAAATCCCCAATGGTACGACTATCTTGGTGGCGGCAATCC CGGTGATAAATTAATTGCGGCCTTAGCAATGTGGGCAGCCAAAGTCCATAGCGGCGGCGATTGGGATCACAAGCCAAAAT TAAACGATCTGCTTGATCTTGATGGCGATCCCTCTACCAATGCTGATAACGATTTCTACTTTCCGATTCGTGGCGACCAA ACCAACGAATACTACTACGATATTTGGTCAAATATTCACTATGGCTATGTTGGGGCAGCCGCTGGCTTTGATACCAGCAC CCTGCAAGATGGAGCCAACCTTGGCGATGCCTTCACCGGCACGAACGACCCAGGCGATGTGCTAACTGTGCAGATTGGGA TTGATCTCTGGAACAAATATGGTAGTTCGATGACTCCTGAACAATTGCATGCCGAAATTTTGGCACATCGCGACGAGTTG GTTAATCTCGATAAAACGACATCAGGCAAAAATCAACGCTAG
Upstream 100 bases:
>100_bases GCATGCTATACTCTTCCTCGACGAGAATACCCCACATCGCAGCCTTATTCGAGCCACCACTGTATTCCTCGCAACAGAAT TATTTAGGAGGAATGAGCAT
Downstream 100 bases:
>100_bases TTGATCCGGCTGGAGTTAGCACATGGCAGGGTTTAGTGATCTCTTGATGATCAGCGGTATATTGGTCTTTTTTCTATTGA GTAGCTTGAGCTTGGGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTAEIVQAQFEQLEQIASRFNRQAEQSESITQSIRQVHDALVGGQWQGDAAKAFANEMQSNVFPAFRRLTAALRESQAVT LQIKNLMRQAEEEAARLFQGPLTEGDAAAKPAGGQPNSNTTQFTAEETPTPTPPADPNNYDRFDQTLQYMHQEMITNAQS ETVGMIKSLLDSFRNPQWYDYLGGGNPGDKLIAALAMWAAKVHSGGDWDHKPKLNDLLDLDGDPSTNADNDFYFPIRGDQ TNEYYYDIWSNIHYGYVGAAAGFDTSTLQDGANLGDAFTGTNDPGDVLTVQIGIDLWNKYGSSMTPEQLHAEILAHRDEL VNLDKTTSGKNQR
Sequences:
>Translated_333_residues MTAEIVQAQFEQLEQIASRFNRQAEQSESITQSIRQVHDALVGGQWQGDAAKAFANEMQSNVFPAFRRLTAALRESQAVT LQIKNLMRQAEEEAARLFQGPLTEGDAAAKPAGGQPNSNTTQFTAEETPTPTPPADPNNYDRFDQTLQYMHQEMITNAQS ETVGMIKSLLDSFRNPQWYDYLGGGNPGDKLIAALAMWAAKVHSGGDWDHKPKLNDLLDLDGDPSTNADNDFYFPIRGDQ TNEYYYDIWSNIHYGYVGAAAGFDTSTLQDGANLGDAFTGTNDPGDVLTVQIGIDLWNKYGSSMTPEQLHAEILAHRDEL VNLDKTTSGKNQR >Mature_332_residues TAEIVQAQFEQLEQIASRFNRQAEQSESITQSIRQVHDALVGGQWQGDAAKAFANEMQSNVFPAFRRLTAALRESQAVTL QIKNLMRQAEEEAARLFQGPLTEGDAAAKPAGGQPNSNTTQFTAEETPTPTPPADPNNYDRFDQTLQYMHQEMITNAQSE TVGMIKSLLDSFRNPQWYDYLGGGNPGDKLIAALAMWAAKVHSGGDWDHKPKLNDLLDLDGDPSTNADNDFYFPIRGDQT NEYYYDIWSNIHYGYVGAAAGFDTSTLQDGANLGDAFTGTNDPGDVLTVQIGIDLWNKYGSSMTPEQLHAEILAHRDELV NLDKTTSGKNQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36830; Mature: 36699
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEIVQAQFEQLEQIASRFNRQAEQSESITQSIRQVHDALVGGQWQGDAAKAFANEMQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH NVFPAFRRLTAALRESQAVTLQIKNLMRQAEEEAARLFQGPLTEGDAAAKPAGGQPNSNT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC TQFTAEETPTPTPPADPNNYDRFDQTLQYMHQEMITNAQSETVGMIKSLLDSFRNPQWYD CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEE YLGGGNPGDKLIAALAMWAAKVHSGGDWDHKPKLNDLLDLDGDPSTNADNDFYFPIRGDQ CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCC TNEYYYDIWSNIHYGYVGAAAGFDTSTLQDGANLGDAFTGTNDPGDVLTVQIGIDLWNKY CCCHHHHHHCCCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHH GSSMTPEQLHAEILAHRDELVNLDKTTSGKNQR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TAEIVQAQFEQLEQIASRFNRQAEQSESITQSIRQVHDALVGGQWQGDAAKAFANEMQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH NVFPAFRRLTAALRESQAVTLQIKNLMRQAEEEAARLFQGPLTEGDAAAKPAGGQPNSNT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC TQFTAEETPTPTPPADPNNYDRFDQTLQYMHQEMITNAQSETVGMIKSLLDSFRNPQWYD CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEE YLGGGNPGDKLIAALAMWAAKVHSGGDWDHKPKLNDLLDLDGDPSTNADNDFYFPIRGDQ CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCC TNEYYYDIWSNIHYGYVGAAAGFDTSTLQDGANLGDAFTGTNDPGDVLTVQIGIDLWNKY CCCHHHHHHCCCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHH GSSMTPEQLHAEILAHRDELVNLDKTTSGKNQR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA