| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900361
Identifier: 159900361
GI number: 159900361
Start: 4827115
End: 4827555
Strand: Direct
Name: 159900361
Synonym: Haur_3844
Alternate gene names: NA
Gene position: 4827115-4827555 (Clockwise)
Preceding gene: 159900360
Following gene: 159900362
Centisome position: 76.06
GC content: 50.57
Gene sequence:
>441_bases ATGAAGGCCAATAGTATGTCAACCAGCGATTCAGATTCACAAGAGATTAAATTGCGCCGCGCCAAGCGCCCCAAGGGCAT TGTGCTGATGGTACTAGCCTTTTATGGAGCCGCCGCGTTGGTGGTGATTTCCGCCTTGGCAACGGGCGGAACTGATGTCA TGCCTAGCGATGTGGCCAGTGTCGTCACGATTTACCTGATTGCATTGGCGTTTGGCTTATGGCGCTTGTGGCGGTGGGCG TGGTTTGCCACCGTGATTATGTTTATTCTGAGCACCTTTTATGTGTTCAGCAATGCCCTGCTGCTGAGCAACTCGATCAT CAGCGTCGAGGTACTATCGCCGTTACTGTTGATTGTGCTGGCTTTGGGCTATTTGCTCTCCAAAGATATTCGCACAATCT ATTTGCGCAATGGTTGGGAGATTGTAAAGGATGAGGGATGA
Upstream 100 bases:
>100_bases CCAATTCGCCGTTGGGATGGCGTAGGCGAAAATCGGGTCTTTACCGACGACCTCGCCCCAGTTGAATCGGTGATCGACCG AATTATTTTGGGGCAGGTTG
Downstream 100 bases:
>100_bases GGGATGAAAGATGTGAGAATTAGCGGATTATTCGTGCAATTCGTGTAATTCGTGGCAAAAAACTAAACCTTCATGTCCTT CGTGCCCTTCGTGGATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVASVVTIYLIALAFGLWRLWRWA WFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVLALGYLLSKDIRTIYLRNGWEIVKDEG
Sequences:
>Translated_146_residues MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVASVVTIYLIALAFGLWRLWRWA WFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVLALGYLLSKDIRTIYLRNGWEIVKDEG >Mature_146_residues MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVASVVTIYLIALAFGLWRLWRWA WFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVLALGYLLSKDIRTIYLRNGWEIVKDEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16134; Mature: 16134
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVAS CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VVTIYLIALAFGLWRLWRWAWFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALGYLLSKDIRTIYLRNGWEIVKDEG HHHHHHHHHHHHEEEECCEEEECCCC >Mature Secondary Structure MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVAS CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VVTIYLIALAFGLWRLWRWAWFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALGYLLSKDIRTIYLRNGWEIVKDEG HHHHHHHHHHHHEEEECCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA