Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900341

Identifier: 159900341

GI number: 159900341

Start: 4798090

End: 4800270

Strand: Reverse

Name: 159900341

Synonym: Haur_3824

Alternate gene names: NA

Gene position: 4800270-4798090 (Counterclockwise)

Preceding gene: 159900348

Following gene: 159900339

Centisome position: 75.64

GC content: 47.96

Gene sequence:

>2181_bases
GTGCAATACCCAAGGCTCCACCAAGTTCATCACAAGCTGGTGCCCCAATTGAAGGTTCATGGAACAAGCTTCATAATCAG
CATCCTGCAGCATAATCCCAAATCACAAGCTGGTGCCCCAATTGAAGGTTCATGGAACCCCAACCTTGCGAGCCATCTAC
GCAATCCAGCGCTGATTCGCCATGCTATTGTCGGCCCAGACCAGAATTTGTATATTGCCGGAGCCTTTAGCAATATCAAC
AATACCGCTGCTAATGGGTTAGCTCGTTGGGATGGTAGCCAATGGCATAGTTTGGCAACCTCGGGCGCTGATGTTGATCG
GGTGCAGAGCATGGCTTTTTTTAATAACAAGCTGACCGTAGGCGGCGCATTTCGCACATGGGCTGGCCAACCATTTGCCC
AGCTTGTGCAATGGGATGGGGCAGATTGGATGCAGCTTGGGAGCGGATTTCAAGGGTCTTTTAATAATAGCCCAACCCAG
ACCACGGCAGTTAATGCCCTGACCGTGCTTAACACTATGCTGATCATCGGCGGCAATTTTACTCAATTTCATGGTCAACC
AGCAAACGGTGTGGTTGGATGGAATGCAACCGATGCAATCCCATTTGGTTCTGCTAATGGTCAGATTAATATGACGGTTG
CAAGTACCGATACCTTAATGATCCATGGTGATTTTCGAACATTTAATAATCAAACAGTTCCATATGGTACGATCCCAAGC
TGGAAAGCTGGTATATGGAAAATTCTCGTGCTCCCAGCCATTCCCAGTGGATTTATCTATAAGGCCAATTTAATAAGTAT
TGATCAGACCATTTATCTCTTGGCGAATGAATCTTATTTCAATGAAACGTTTGTATTTCGCTGGCAAAATGAACGTTGGG
TTCAACTCGGAACAGGCCTGCCTGGTCAATTCACCAAACTCACCAACGCTAATGGCTCGCTCTATCTGGCGCAAGCTGAT
GGTGATGGAAATGCCAACGATAGCTATGGGGTGGTGCTTCGACTAGTGGATAATCAATGGCAAACAGTTAATCTGCCGCA
TAGTTACACAAGCATTAGCCAATTAGTAGCGATTGGCTCTGATGTATATATTATTGGGCTGCCAGCGGAAAATCAGCAAT
GCCCAAATCTTGTCTGTACCTTTACCGTTGAACGCTGGAATGGCACAACCCTTCAGCTGATTGGTGAAGCTTGGCAAGCA
CCAAGCATTGTGTCGCTGGTTGGCGACGTAGATCATGTTTGGGCAACCAGTCGGCCTACCTATCTTGATCGGCAGGCAGC
GCCGACAGTGTTGTTTTGGAATGGTCAATTGTGGCAAGGCTCTTCCAATACAGAATCGTTTACCACTACGATCGTTCCAA
CGCTGTTCAAAACAGCAGATAATAGCGTCTACTATACGACGCGCTTCGAAGGGAGTATTGACCGTCAGGTTTGGGGTAAT
GTCTGGCGCTTGGATCGCCTTACCCGCACATGGAACCCCAATATTGACATTGGTGGTTGGTTTGGTGGCTGGAACACAAG
TGGCAAGGATCTCTTGGGGTCTGCTGGTAGCGTCGTGATGTATAGTAGGCCAGTCGATGGAGTTCTCCGGTTGCGGAGCA
ACGTTTGGTCTGAAGAAACCAGCGAGTTCGAGGTGGCTGGCGCGTGTGATATCTGTGTGCCATTTGAAGTTAATGGTGAG
TTTTATCAGCTTGTGGTTAGAGCGCAACTTCAGCTTATCCATTGGAATGGCAGTAGCTGGGATACACTCAATAGTTGGGA
GAATAGCTATCCTGTCCAGCTGACATCCTACCCAGTTGTCGTATGGCGTGGCGATTTTTACTTGATCAATGGTCGCAAGC
TCCAACGCTATAACTTAACAACCCAAATGGTCGAAGATATTGCCCTGCTTGATGGTGATGGCTATAGTTTAGCTACCTTC
ACTGATCAATATTTGTATGTTGGGGGCGCTTTTTCCAGCGTCAATGGGATTGCCGCCCAGAACCTCGCCCGCTGGAATGG
CACGCAATGGCAGGCGCTGAGCCAAGCCCCAAATGGGCCAGTCTACGTCATTGCCACCTCGCCAAATTATCTGTATATTG
CAGGAAACTTCAGCCAAGTTGGTACAACCAACTCCCTCGGGGTAGGCGTATATCACTTAACCAGCTCGTATCAAGTTTTT
GCCCCGATAAGCAATAAATAA

Upstream 100 bases:

>100_bases
TTCAATCTTTTTTCAGGAGGGAAGCATATGTCTCGTGCGATTCGCAGCATGATCGGCTGTTTTGGCTTAATCATCATGTT
GAATATGATTACCCCAACTC

Downstream 100 bases:

>100_bases
ACTCGAAATGGCCTGTAATGATTGGAATTACAGGCCATTTTTTTGATTAGCGCTGTGCCAAAATTTCATACAACAGCACC
CCTGTGGCCACCGCCAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 726; Mature: 726

Protein sequence:

>726_residues
MQYPRLHQVHHKLVPQLKVHGTSFIISILQHNPKSQAGAPIEGSWNPNLASHLRNPALIRHAIVGPDQNLYIAGAFSNIN
NTAANGLARWDGSQWHSLATSGADVDRVQSMAFFNNKLTVGGAFRTWAGQPFAQLVQWDGADWMQLGSGFQGSFNNSPTQ
TTAVNALTVLNTMLIIGGNFTQFHGQPANGVVGWNATDAIPFGSANGQINMTVASTDTLMIHGDFRTFNNQTVPYGTIPS
WKAGIWKILVLPAIPSGFIYKANLISIDQTIYLLANESYFNETFVFRWQNERWVQLGTGLPGQFTKLTNANGSLYLAQAD
GDGNANDSYGVVLRLVDNQWQTVNLPHSYTSISQLVAIGSDVYIIGLPAENQQCPNLVCTFTVERWNGTTLQLIGEAWQA
PSIVSLVGDVDHVWATSRPTYLDRQAAPTVLFWNGQLWQGSSNTESFTTTIVPTLFKTADNSVYYTTRFEGSIDRQVWGN
VWRLDRLTRTWNPNIDIGGWFGGWNTSGKDLLGSAGSVVMYSRPVDGVLRLRSNVWSEETSEFEVAGACDICVPFEVNGE
FYQLVVRAQLQLIHWNGSSWDTLNSWENSYPVQLTSYPVVVWRGDFYLINGRKLQRYNLTTQMVEDIALLDGDGYSLATF
TDQYLYVGGAFSSVNGIAAQNLARWNGTQWQALSQAPNGPVYVIATSPNYLYIAGNFSQVGTTNSLGVGVYHLTSSYQVF
APISNK

Sequences:

>Translated_726_residues
MQYPRLHQVHHKLVPQLKVHGTSFIISILQHNPKSQAGAPIEGSWNPNLASHLRNPALIRHAIVGPDQNLYIAGAFSNIN
NTAANGLARWDGSQWHSLATSGADVDRVQSMAFFNNKLTVGGAFRTWAGQPFAQLVQWDGADWMQLGSGFQGSFNNSPTQ
TTAVNALTVLNTMLIIGGNFTQFHGQPANGVVGWNATDAIPFGSANGQINMTVASTDTLMIHGDFRTFNNQTVPYGTIPS
WKAGIWKILVLPAIPSGFIYKANLISIDQTIYLLANESYFNETFVFRWQNERWVQLGTGLPGQFTKLTNANGSLYLAQAD
GDGNANDSYGVVLRLVDNQWQTVNLPHSYTSISQLVAIGSDVYIIGLPAENQQCPNLVCTFTVERWNGTTLQLIGEAWQA
PSIVSLVGDVDHVWATSRPTYLDRQAAPTVLFWNGQLWQGSSNTESFTTTIVPTLFKTADNSVYYTTRFEGSIDRQVWGN
VWRLDRLTRTWNPNIDIGGWFGGWNTSGKDLLGSAGSVVMYSRPVDGVLRLRSNVWSEETSEFEVAGACDICVPFEVNGE
FYQLVVRAQLQLIHWNGSSWDTLNSWENSYPVQLTSYPVVVWRGDFYLINGRKLQRYNLTTQMVEDIALLDGDGYSLATF
TDQYLYVGGAFSSVNGIAAQNLARWNGTQWQALSQAPNGPVYVIATSPNYLYIAGNFSQVGTTNSLGVGVYHLTSSYQVF
APISNK
>Mature_726_residues
MQYPRLHQVHHKLVPQLKVHGTSFIISILQHNPKSQAGAPIEGSWNPNLASHLRNPALIRHAIVGPDQNLYIAGAFSNIN
NTAANGLARWDGSQWHSLATSGADVDRVQSMAFFNNKLTVGGAFRTWAGQPFAQLVQWDGADWMQLGSGFQGSFNNSPTQ
TTAVNALTVLNTMLIIGGNFTQFHGQPANGVVGWNATDAIPFGSANGQINMTVASTDTLMIHGDFRTFNNQTVPYGTIPS
WKAGIWKILVLPAIPSGFIYKANLISIDQTIYLLANESYFNETFVFRWQNERWVQLGTGLPGQFTKLTNANGSLYLAQAD
GDGNANDSYGVVLRLVDNQWQTVNLPHSYTSISQLVAIGSDVYIIGLPAENQQCPNLVCTFTVERWNGTTLQLIGEAWQA
PSIVSLVGDVDHVWATSRPTYLDRQAAPTVLFWNGQLWQGSSNTESFTTTIVPTLFKTADNSVYYTTRFEGSIDRQVWGN
VWRLDRLTRTWNPNIDIGGWFGGWNTSGKDLLGSAGSVVMYSRPVDGVLRLRSNVWSEETSEFEVAGACDICVPFEVNGE
FYQLVVRAQLQLIHWNGSSWDTLNSWENSYPVQLTSYPVVVWRGDFYLINGRKLQRYNLTTQMVEDIALLDGDGYSLATF
TDQYLYVGGAFSSVNGIAAQNLARWNGTQWQALSQAPNGPVYVIATSPNYLYIAGNFSQVGTTNSLGVGVYHLTSSYQVF
APISNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80129; Mature: 80129

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYPRLHQVHHKLVPQLKVHGTSFIISILQHNPKSQAGAPIEGSWNPNLASHLRNPALIR
CCCCHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHEE
HAIVGPDQNLYIAGAFSNINNTAANGLARWDGSQWHSLATSGADVDRVQSMAFFNNKLTV
EEEECCCCCEEEEEEECCCCCHHHCCEEECCCCHHHHHHCCCCCHHHHHHHHHCCCEEEE
GGAFRTWAGQPFAQLVQWDGADWMQLGSGFQGSFNNSPTQTTAVNALTVLNTMLIIGGNF
CCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCE
TQFHGQPANGVVGWNATDAIPFGSANGQINMTVASTDTLMIHGDFRTFNNQTVPYGTIPS
EEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEEECCEEEEEECEEECCCCCCCCCCCCC
WKAGIWKILVLPAIPSGFIYKANLISIDQTIYLLANESYFNETFVFRWQNERWVQLGTGL
CCCCEEEEEEECCCCCCEEEEEEEEEECEEEEEEECCCCCCCEEEEEECCCEEEEECCCC
PGQFTKLTNANGSLYLAQADGDGNANDSYGVVLRLVDNQWQTVNLPHSYTSISQLVAIGS
CCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHCCC
DVYIIGLPAENQQCPNLVCTFTVERWNGTTLQLIGEAWQAPSIVSLVGDVDHVWATSRPT
CEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEHHHCCCCCHHHHHCCCHHHCCCCCCC
YLDRQAAPTVLFWNGQLWQGSSNTESFTTTIVPTLFKTADNSVYYTTRFEGSIDRQVWGN
EECCCCCCEEEEECCEEECCCCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCCCHHHHCC
VWRLDRLTRTWNPNIDIGGWFGGWNTSGKDLLGSAGSVVMYSRPVDGVLRLRSNVWSEET
HHHHHHHHHCCCCCEEECCEECCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCC
SEFEVAGACDICVPFEVNGEFYQLVVRAQLQLIHWNGSSWDTLNSWENSYPVQLTSYPVV
CCEEEECEEEEEEEEEECCHHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCEEE
VWRGDFYLINGRKLQRYNLTTQMVEDIALLDGDGYSLATFTDQYLYVGGAFSSVNGIAAQ
EEECCEEEECCCEEEEECCHHHHHHHEEEECCCCEEEEEEECCEEEEECCHHCCCCHHHH
NLARWNGTQWQALSQAPNGPVYVIATSPNYLYIAGNFSQVGTTNSLGVGVYHLTSSYQVF
HHHHCCCCCCHHHHCCCCCCEEEEEECCCEEEEEECCHHCCCCCCCCEEEEEEECCEEEE
APISNK
EECCCC
>Mature Secondary Structure
MQYPRLHQVHHKLVPQLKVHGTSFIISILQHNPKSQAGAPIEGSWNPNLASHLRNPALIR
CCCCHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHEE
HAIVGPDQNLYIAGAFSNINNTAANGLARWDGSQWHSLATSGADVDRVQSMAFFNNKLTV
EEEECCCCCEEEEEEECCCCCHHHCCEEECCCCHHHHHHCCCCCHHHHHHHHHCCCEEEE
GGAFRTWAGQPFAQLVQWDGADWMQLGSGFQGSFNNSPTQTTAVNALTVLNTMLIIGGNF
CCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCE
TQFHGQPANGVVGWNATDAIPFGSANGQINMTVASTDTLMIHGDFRTFNNQTVPYGTIPS
EEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEEECCEEEEEECEEECCCCCCCCCCCCC
WKAGIWKILVLPAIPSGFIYKANLISIDQTIYLLANESYFNETFVFRWQNERWVQLGTGL
CCCCEEEEEEECCCCCCEEEEEEEEEECEEEEEEECCCCCCCEEEEEECCCEEEEECCCC
PGQFTKLTNANGSLYLAQADGDGNANDSYGVVLRLVDNQWQTVNLPHSYTSISQLVAIGS
CCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHCCC
DVYIIGLPAENQQCPNLVCTFTVERWNGTTLQLIGEAWQAPSIVSLVGDVDHVWATSRPT
CEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEHHHCCCCCHHHHHCCCHHHCCCCCCC
YLDRQAAPTVLFWNGQLWQGSSNTESFTTTIVPTLFKTADNSVYYTTRFEGSIDRQVWGN
EECCCCCCEEEEECCEEECCCCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCCCHHHHCC
VWRLDRLTRTWNPNIDIGGWFGGWNTSGKDLLGSAGSVVMYSRPVDGVLRLRSNVWSEET
HHHHHHHHHCCCCCEEECCEECCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCC
SEFEVAGACDICVPFEVNGEFYQLVVRAQLQLIHWNGSSWDTLNSWENSYPVQLTSYPVV
CCEEEECEEEEEEEEEECCHHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCEEE
VWRGDFYLINGRKLQRYNLTTQMVEDIALLDGDGYSLATFTDQYLYVGGAFSSVNGIAAQ
EEECCEEEECCCEEEEECCHHHHHHHEEEECCCCEEEEEEECCEEEEECCHHCCCCHHHH
NLARWNGTQWQALSQAPNGPVYVIATSPNYLYIAGNFSQVGTTNSLGVGVYHLTSSYQVF
HHHHCCCCCCHHHHCCCCCCEEEEEECCCEEEEEECCHHCCCCCCCCEEEEEEECCEEEE
APISNK
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA