| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900326
Identifier: 159900326
GI number: 159900326
Start: 4781061
End: 4782161
Strand: Direct
Name: 159900326
Synonym: Haur_3809
Alternate gene names: NA
Gene position: 4781061-4782161 (Clockwise)
Preceding gene: 159900312
Following gene: 159900327
Centisome position: 75.33
GC content: 54.22
Gene sequence:
>1101_bases ATGCTCCGACGAGCAGCCATCCATCGCTGGTTATTGGTTTTAGTCGCGCTATTTGTGGCCATGCCAGTTGCGGCGCAAGC CCCGACCGAAGGCGCAAAAGCTGGCGCGTGGATTGTCACTCAGGCTCAGGCCGATGGCAGTTTTCCTGGCTTTGGGTTGG GCGAAACCGCCGATGCCGTCTATGCCTTGAAGGCAACTGGCTTGAAAGTTGATCTCAACGTTCAAAGCTTTATCGAAAAA AATGCTAGTGCAATCGCCGCTAAGCCTGGGGTTGCCGCCAAGTTTGTGTTGGCCGAATTGTTGCTGGGCTACAATCCTCG CGCCGTTGCCGGAACCGATTTGGTCGCGGCTGTAACTGGCAGCTACAAAGCCGATAGTGGTATGTATGGTGGCGATGTCA CGACCCATGCCTTGGCTTTGTTGGCCTTGAATGCTGCTGGCGCACCAGTCGAAAACAAAGCGATCAACACCTTGAACTCG GTCCAAATCGCCGATGGATCATGGTCGTTCAGCGGCGATACAACTGCTGGCGCTGGCGATACCAATACCACCGCTTTGGT AGTACAAGCCTTGGTTGCGATTGGTCAAGGTAAGAGCGAAGCTGTTACCAAGGCGCTGAGCTACTTGCAAAGCCAACAAA ATAGTGATGGTGGTTTTCCCTATTCGAAGGCTTCGAGCTATGGCAGCGCCACCGATGCCAACTCAACCGGCTTGGTAATT CAAGCGATTGTGGCAACTGGCGGTAATCCAACCGCTGCACCTTGGGCGACGGCGACTGGCAATCCATTGAGTGCCTTGTT GAGCTTGCAAAATGCCAGCGGTGCGTTCCGCTACGATGCAGCAACGCCCGATGATAATGCGTTTGCGACATATCAAGCTA CGCCTGCTTTGTTCTATGTGACCTATCCTTTGACCGCCTTGGTGACAGCACCCCAACCAACTGCTGTGCCAAGCACACCT GTGGCAACCGCTACCCCCAAACCAAACACCCCAATTACCTTGCCCGACACTGGCGCACCTGCATTGCCATTATGGCCAGT GGTGATTGTGTTTGGCTTGGCTTGTATTGTGGCTGGTTTACGTTTGCGCCGCGTCGCTTAA
Upstream 100 bases:
>100_bases TTGATTTCTGGGTTGGCTTGCGTTGGCACAAGCACAACCAACGCGTTGTTATCTGTTCCTTAGCCAACTGGCTAAGGTTT TTTTGATTTAGGAGGCACGC
Downstream 100 bases:
>100_bases TCTATATATTCCCTCACCCCCTCACCCCATCTCCCGCCCAGCAGGCGAGGGGGGAGCCGCGAAAAGCCCCTCGCCCGCCG CAGTGGGAGAGGGGTTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MLRRAAIHRWLLVLVALFVAMPVAAQAPTEGAKAGAWIVTQAQADGSFPGFGLGETADAVYALKATGLKVDLNVQSFIEK NASAIAAKPGVAAKFVLAELLLGYNPRAVAGTDLVAAVTGSYKADSGMYGGDVTTHALALLALNAAGAPVENKAINTLNS VQIADGSWSFSGDTTAGAGDTNTTALVVQALVAIGQGKSEAVTKALSYLQSQQNSDGGFPYSKASSYGSATDANSTGLVI QAIVATGGNPTAAPWATATGNPLSALLSLQNASGAFRYDAATPDDNAFATYQATPALFYVTYPLTALVTAPQPTAVPSTP VATATPKPNTPITLPDTGAPALPLWPVVIVFGLACIVAGLRLRRVA
Sequences:
>Translated_366_residues MLRRAAIHRWLLVLVALFVAMPVAAQAPTEGAKAGAWIVTQAQADGSFPGFGLGETADAVYALKATGLKVDLNVQSFIEK NASAIAAKPGVAAKFVLAELLLGYNPRAVAGTDLVAAVTGSYKADSGMYGGDVTTHALALLALNAAGAPVENKAINTLNS VQIADGSWSFSGDTTAGAGDTNTTALVVQALVAIGQGKSEAVTKALSYLQSQQNSDGGFPYSKASSYGSATDANSTGLVI QAIVATGGNPTAAPWATATGNPLSALLSLQNASGAFRYDAATPDDNAFATYQATPALFYVTYPLTALVTAPQPTAVPSTP VATATPKPNTPITLPDTGAPALPLWPVVIVFGLACIVAGLRLRRVA >Mature_366_residues MLRRAAIHRWLLVLVALFVAMPVAAQAPTEGAKAGAWIVTQAQADGSFPGFGLGETADAVYALKATGLKVDLNVQSFIEK NASAIAAKPGVAAKFVLAELLLGYNPRAVAGTDLVAAVTGSYKADSGMYGGDVTTHALALLALNAAGAPVENKAINTLNS VQIADGSWSFSGDTTAGAGDTNTTALVVQALVAIGQGKSEAVTKALSYLQSQQNSDGGFPYSKASSYGSATDANSTGLVI QAIVATGGNPTAAPWATATGNPLSALLSLQNASGAFRYDAATPDDNAFATYQATPALFYVTYPLTALVTAPQPTAVPSTP VATATPKPNTPITLPDTGAPALPLWPVVIVFGLACIVAGLRLRRVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37102; Mature: 37102
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRAAIHRWLLVLVALFVAMPVAAQAPTEGAKAGAWIVTQAQADGSFPGFGLGETADAV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHE YALKATGLKVDLNVQSFIEKNASAIAAKPGVAAKFVLAELLLGYNPRAVAGTDLVAAVTG EEEEECCEEEECCHHHHHHCCCHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECC SYKADSGMYGGDVTTHALALLALNAAGAPVENKAINTLNSVQIADGSWSFSGDTTAGAGD CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCEECCCCCCCCCCC TNTTALVVQALVAIGQGKSEAVTKALSYLQSQQNSDGGFPYSKASSYGSATDANSTGLVI CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE QAIVATGGNPTAAPWATATGNPLSALLSLQNASGAFRYDAATPDDNAFATYQATPALFYV EEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCEEEEE TYPLTALVTAPQPTAVPSTPVATATPKPNTPITLPDTGAPALPLWPVVIVFGLACIVAGL EECCEEEEECCCCCCCCCCCCEECCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH RLRRVA HHHCCC >Mature Secondary Structure MLRRAAIHRWLLVLVALFVAMPVAAQAPTEGAKAGAWIVTQAQADGSFPGFGLGETADAV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHE YALKATGLKVDLNVQSFIEKNASAIAAKPGVAAKFVLAELLLGYNPRAVAGTDLVAAVTG EEEEECCEEEECCHHHHHHCCCHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECC SYKADSGMYGGDVTTHALALLALNAAGAPVENKAINTLNSVQIADGSWSFSGDTTAGAGD CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCEECCCCCCCCCCC TNTTALVVQALVAIGQGKSEAVTKALSYLQSQQNSDGGFPYSKASSYGSATDANSTGLVI CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE QAIVATGGNPTAAPWATATGNPLSALLSLQNASGAFRYDAATPDDNAFATYQATPALFYV EEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCEEEEE TYPLTALVTAPQPTAVPSTPVATATPKPNTPITLPDTGAPALPLWPVVIVFGLACIVAGL EECCEEEEECCCCCCCCCCCCEECCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH RLRRVA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA