| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is fabH [H]
Identifier: 159900316
GI number: 159900316
Start: 4769857
End: 4770876
Strand: Reverse
Name: fabH [H]
Synonym: Haur_3799
Alternate gene names: 159900316
Gene position: 4770876-4769857 (Counterclockwise)
Preceding gene: 159900317
Following gene: 159900315
Centisome position: 75.17
GC content: 52.16
Gene sequence:
>1020_bases ATGACCTACGAATTTCCGCCAATTGGCATTGCTGCAATCGCGACCTATCTGCCAGCAGCCGTCGAGACTGCTAGTCAAAT CGCCTTAGCCGCCAATATCCCCGAAGCCGTGGTGATCGAAAAGCTGGGTATTCGCCAAAAACACTTGGCCGAAGCCCACG ATACACCATCGGCCATGGCGGCTGAGGCTGCTCGTAAAGCCTTGGCAATCGCCGAACTCGACCCGCTGGATGTTGATCTG ATTATTTATCATGGCAGTGAATACAAAGATTATGTGGTTTGGTCGGCGGCGGCCAAAATTCAACATCTGATCGGGGCTAA ACGGGCGTATGCCTATGAAATTTATGCCTTGTGTGCTGGCTCACCAGTTGCCATCAAAACCGCCCGCGATCAAATGCGAG CCGACCCAATGTTGCGTAATGTTCTGTTGGTTTCAGCAGCCCGCGAAAATGAGCTAGTGCGCTATGACAACCAACAAGCG CGATTTATGTTCAACTTTGGCGCGGGTGCTTCGGCCATGCTGCTACGCCGCGATTATGCAACCAACCAAGTGCTCGAATC GGCGGTGCTGGTTGATGGCTCGTTTAGCGAAAATGTCGTGATGCGCGGTGGTGGCGCTCGCTTCCCAACCAGCCAAGCCA CGGTCGATGCAGGCTACCATCAACTTGATGTGTTGCAGCTTGAAGATATGCGTGATCGCTTGGGCTTGGTTTCGCAACCT AATTTTGTGCAAGTGATCGATCAAGCAGTTACCCGTTCGGGCTATCGGCGTTCGGATATTGATTTTTTGGCGATTACCCA TATGAAGCCTTCATTTCACAATGGCTTATTGCACGATTTGGGCTTACGCCCCGATCAAGCGATCTACCTTGATGATTATG GGCATATTCAATCGGTTGATCAACAATTGGCGCTTGATTTGGCCCAACAACGTGGCTTGCTCAAAGCTGGCGATTTGGTG GTGTTGGCAGGTGCTGGCACTGGCTATACTTGGGCCGCAAGCGCCGTGCGTTGGGGGTAA
Upstream 100 bases:
>100_bases TCCCGGCTGGTTTGATGGGAGCAATTCGCAAGTTGCGCGGCAAAACCAGCCGTAGCTCAGTCGAACGCCTACGCCAAGCC ATGAAACCAAAGGCTGAATC
Downstream 100 bases:
>100_bases ACCAAGGCAAAAGTCAAAGGGCAAAAGTCAAAAAGGGGCAGGTATCAGAATCTAGGGGATAGGTTTAACGCAGAGATTCC TAAGGATGAATTATGAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTYEFPPIGIAAIATYLPAAVETASQIALAANIPEAVVIEKLGIRQKHLAEAHDTPSAMAAEAARKALAIAELDPLDVDL IIYHGSEYKDYVVWSAAAKIQHLIGAKRAYAYEIYALCAGSPVAIKTARDQMRADPMLRNVLLVSAARENELVRYDNQQA RFMFNFGAGASAMLLRRDYATNQVLESAVLVDGSFSENVVMRGGGARFPTSQATVDAGYHQLDVLQLEDMRDRLGLVSQP NFVQVIDQAVTRSGYRRSDIDFLAITHMKPSFHNGLLHDLGLRPDQAIYLDDYGHIQSVDQQLALDLAQQRGLLKAGDLV VLAGAGTGYTWAASAVRWG
Sequences:
>Translated_339_residues MTYEFPPIGIAAIATYLPAAVETASQIALAANIPEAVVIEKLGIRQKHLAEAHDTPSAMAAEAARKALAIAELDPLDVDL IIYHGSEYKDYVVWSAAAKIQHLIGAKRAYAYEIYALCAGSPVAIKTARDQMRADPMLRNVLLVSAARENELVRYDNQQA RFMFNFGAGASAMLLRRDYATNQVLESAVLVDGSFSENVVMRGGGARFPTSQATVDAGYHQLDVLQLEDMRDRLGLVSQP NFVQVIDQAVTRSGYRRSDIDFLAITHMKPSFHNGLLHDLGLRPDQAIYLDDYGHIQSVDQQLALDLAQQRGLLKAGDLV VLAGAGTGYTWAASAVRWG >Mature_338_residues TYEFPPIGIAAIATYLPAAVETASQIALAANIPEAVVIEKLGIRQKHLAEAHDTPSAMAAEAARKALAIAELDPLDVDLI IYHGSEYKDYVVWSAAAKIQHLIGAKRAYAYEIYALCAGSPVAIKTARDQMRADPMLRNVLLVSAARENELVRYDNQQAR FMFNFGAGASAMLLRRDYATNQVLESAVLVDGSFSENVVMRGGGARFPTSQATVDAGYHQLDVLQLEDMRDRLGLVSQPN FVQVIDQAVTRSGYRRSDIDFLAITHMKPSFHNGLLHDLGLRPDQAIYLDDYGHIQSVDQQLALDLAQQRGLLKAGDLVV LAGAGTGYTWAASAVRWG
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=330, Percent_Identity=23.6363636363636, Blast_Score=98, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 36973; Mature: 36841
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYEFPPIGIAAIATYLPAAVETASQIALAANIPEAVVIEKLGIRQKHLAEAHDTPSAMA CCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHCCCHHHHH AEAARKALAIAELDPLDVDLIIYHGSEYKDYVVWSAAAKIQHLIGAKRAYAYEIYALCAG HHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHCCHHHHHEEEEEEECC SPVAIKTARDQMRADPMLRNVLLVSAARENELVRYDNQQARFMFNFGAGASAMLLRRDYA CCEEEECHHHHHHCCHHHHHHHHEECCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHH TNQVLESAVLVDGSFSENVVMRGGGARFPTSQATVDAGYHQLDVLQLEDMRDRLGLVSQP HHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCEECCCCCEEEEEEHHHHHHHCCCCCCC NFVQVIDQAVTRSGYRRSDIDFLAITHMKPSFHNGLLHDLGLRPDQAIYLDDYGHIQSVD HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHCCHHHHCCCCCCCEEEECCCCHHHHHH QQLALDLAQQRGLLKAGDLVVLAGAGTGYTWAASAVRWG HHHHHHHHHHCCCEEECCEEEEEECCCCCCHHCCCCCCC >Mature Secondary Structure TYEFPPIGIAAIATYLPAAVETASQIALAANIPEAVVIEKLGIRQKHLAEAHDTPSAMA CCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHCCCHHHHH AEAARKALAIAELDPLDVDLIIYHGSEYKDYVVWSAAAKIQHLIGAKRAYAYEIYALCAG HHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHCCHHHHHEEEEEEECC SPVAIKTARDQMRADPMLRNVLLVSAARENELVRYDNQQARFMFNFGAGASAMLLRRDYA CCEEEECHHHHHHCCHHHHHHHHEECCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHH TNQVLESAVLVDGSFSENVVMRGGGARFPTSQATVDAGYHQLDVLQLEDMRDRLGLVSQP HHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCEECCCCCEEEEEEHHHHHHHCCCCCCC NFVQVIDQAVTRSGYRRSDIDFLAITHMKPSFHNGLLHDLGLRPDQAIYLDDYGHIQSVD HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHCCHHHHCCCCCCCEEEECCCCHHHHHH QQLALDLAQQRGLLKAGDLVVLAGAGTGYTWAASAVRWG HHHHHHHHHHCCCEEECCEEEEEECCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA