| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900298
Identifier: 159900298
GI number: 159900298
Start: 4750100
End: 4750951
Strand: Direct
Name: 159900298
Synonym: Haur_3781
Alternate gene names: NA
Gene position: 4750100-4750951 (Clockwise)
Preceding gene: 159900296
Following gene: 159900299
Centisome position: 74.84
GC content: 53.52
Gene sequence:
>852_bases ATGGATATTGATGCGCTGTGGGAATATGCTGACCCTGCTGTGAGCGAGAGCCGTTTTGTGCAGGCCTTGAACGAAACCAG CGGTGACGATCAGCTTGAACTTCTCAGCCAAATTGCCCGCACATTTTCGCTGCGTGGGCGGTTTGCCGAAGCGCATGAAC GGCTCGATCAACTCGAAGCCCAATTGCCTGTAGCAGGTGAGCGACCCAAAGTGCGTTATTACTTAGAGCGAGGCCGCACC CACAATTCGGCTGGCGAGCTCGAAATGGCGCGTTATTTCTTTAGCCAAGCTTGGAAACTGGCTAGCCAAGCGGGTTTTGT GGGCTTAGCAGTTGATGCAGCGCATATGTTGGCAATTAGTTATGGTAGCGATCAACAAGCGCTGAGCTGGAACCAACAGG GCTTGGAGCTAGCCCGCAGCTCTGATGACCCCAAAGCCCAAGCATTAATTCCTGCGATGCTCAATAATGCCGCTTGGGAT CTGCATGAACGCGGTGAGTTTGCTGAGGCTCTAGCATTATTCAAAGAGGCTGAACAGGCATGGCTGCAACGTGAACGCCC GCGCCAAATTCAAATTGCCCGGTGGTCGGTGGCCCGCTGTTTACGGTCATTGGGCGACTATCAATCGGCGCTAGCATTGC AACAAGCGCTGGCCGACGAACTGCAAGCCGCAGGCATCACCGATGGCTATGTTTTCGAGGAAATTGGCGAGAATCTAGCC GCTTTAGGCGAGCATGAGGCGGCTAAGCCCTACTTTGAGCAAGCCTATCACGCTTTAGCCCAAGATCAATGGTTTGTACA AAACGAGGCCGCGCGATTACTCAACCTCAACATTCGAGCAGGCAAAGCCTAA
Upstream 100 bases:
>100_bases GAGATCGGGTGAATATTTCTCAAGCCGCTTGACAGTGATTCATTTGACTCTTTAAAATAGCAAAGCTGTGCTATTTGAAT TGGAATGGAGCAATTGAAGT
Downstream 100 bases:
>100_bases ATTATGGCGAATCAATGCCTGCCAACTAGCTAAAATTGCTGATTAGAAGGCATTGATTTGCGTTCGACACTCCCCTTAAA CTGCGCTATAATCCAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MDIDALWEYADPAVSESRFVQALNETSGDDQLELLSQIARTFSLRGRFAEAHERLDQLEAQLPVAGERPKVRYYLERGRT HNSAGELEMARYFFSQAWKLASQAGFVGLAVDAAHMLAISYGSDQQALSWNQQGLELARSSDDPKAQALIPAMLNNAAWD LHERGEFAEALALFKEAEQAWLQRERPRQIQIARWSVARCLRSLGDYQSALALQQALADELQAAGITDGYVFEEIGENLA ALGEHEAAKPYFEQAYHALAQDQWFVQNEAARLLNLNIRAGKA
Sequences:
>Translated_283_residues MDIDALWEYADPAVSESRFVQALNETSGDDQLELLSQIARTFSLRGRFAEAHERLDQLEAQLPVAGERPKVRYYLERGRT HNSAGELEMARYFFSQAWKLASQAGFVGLAVDAAHMLAISYGSDQQALSWNQQGLELARSSDDPKAQALIPAMLNNAAWD LHERGEFAEALALFKEAEQAWLQRERPRQIQIARWSVARCLRSLGDYQSALALQQALADELQAAGITDGYVFEEIGENLA ALGEHEAAKPYFEQAYHALAQDQWFVQNEAARLLNLNIRAGKA >Mature_283_residues MDIDALWEYADPAVSESRFVQALNETSGDDQLELLSQIARTFSLRGRFAEAHERLDQLEAQLPVAGERPKVRYYLERGRT HNSAGELEMARYFFSQAWKLASQAGFVGLAVDAAHMLAISYGSDQQALSWNQQGLELARSSDDPKAQALIPAMLNNAAWD LHERGEFAEALALFKEAEQAWLQRERPRQIQIARWSVARCLRSLGDYQSALALQQALADELQAAGITDGYVFEEIGENLA ALGEHEAAKPYFEQAYHALAQDQWFVQNEAARLLNLNIRAGKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31683; Mature: 31683
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIDALWEYADPAVSESRFVQALNETSGDDQLELLSQIARTFSLRGRFAEAHERLDQLEA CCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QLPVAGERPKVRYYLERGRTHNSAGELEMARYFFSQAWKLASQAGFVGLAVDAAHMLAIS CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEE YGSDQQALSWNQQGLELARSSDDPKAQALIPAMLNNAAWDLHERGEFAEALALFKEAEQA CCCCHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH WLQRERPRQIQIARWSVARCLRSLGDYQSALALQQALADELQAAGITDGYVFEEIGENLA HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ALGEHEAAKPYFEQAYHALAQDQWFVQNEAARLLNLNIRAGKA HHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEECCCCC >Mature Secondary Structure MDIDALWEYADPAVSESRFVQALNETSGDDQLELLSQIARTFSLRGRFAEAHERLDQLEA CCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QLPVAGERPKVRYYLERGRTHNSAGELEMARYFFSQAWKLASQAGFVGLAVDAAHMLAIS CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEE YGSDQQALSWNQQGLELARSSDDPKAQALIPAMLNNAAWDLHERGEFAEALALFKEAEQA CCCCHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH WLQRERPRQIQIARWSVARCLRSLGDYQSALALQQALADELQAAGITDGYVFEEIGENLA HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ALGEHEAAKPYFEQAYHALAQDQWFVQNEAARLLNLNIRAGKA HHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA