Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is gpmB [H]

Identifier: 159900295

GI number: 159900295

Start: 4747850

End: 4748473

Strand: Direct

Name: gpmB [H]

Synonym: Haur_3778

Alternate gene names: 159900295

Gene position: 4747850-4748473 (Clockwise)

Preceding gene: 159900294

Following gene: 159900296

Centisome position: 74.81

GC content: 50.96

Gene sequence:

>624_bases
ATGGCTAAAATCGCCCTTGTCAGTCATCCCGAATCGCTGCACCATATCGAACACAAAGTTGGTGGTTGGTACGATACAGG
CTTAACAGAACGTGGTCAGCGCCAAGCCAAGGCGATTGCAACCGCATTGGCCGAAGCGGGGATTCATGCTTGTTCGATCT
ATAGCTCAGATTTGCAGCGGACTGCCCAAACTGCTGAGATAATTGCCCAAACGTTGGCTAGTCCAGTTATACTTGATCAA
CGCCTGCGAGAGATGAGTTATGGGGCGGCAGAAGGCCGTGATCAAGCATGGTTTGATCAGCAGATTGTCTATCCACCTAA
CGGCGTTGGTAGGCTTGATCATCGGATTTATCCAAGCAGCGAGAATCGACGCGAGGTGGCAACGCGAGTGTATGCCGCCA
TGGAAATGATTACTGCTACTGCTGAACAACAGCTCGTGATTGTGACCCATGGCTTTGCGGCAACCTTTGTGATTGCCGCT
TGGCTCGGGATGCCGCTTGAGTCAGTTGGTTTAGTGGCCTTTCGGGTTACTTCGGGCAGCATTTCGTGGCTAACCCAAAC
TGCACCATTCCACAACCGTATGCTTGATCGATTAAATGATACGCAGCACCTAACCAACCTTTGA

Upstream 100 bases:

>100_bases
AAAGATATTCTGACCAAATCGCCGAACCACCCGCATGGCATTAAAGTGCGTTTGGTAACGGGTGAAGTTGGGCGGGTCAA
ACAAATTTTGGGTTCGCCGA

Downstream 100 bases:

>100_bases
GGAGTGGATGATGACTACTGCGCTCAAGGCGGCGTTCGGCCAATTTTTCGATTGCCAAGATGTAAACTTTCTCGATGAGC
TTTTGGCACAACCTGGCCGT

Product: phosphoglycerate mutase

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAKIALVSHPESLHHIEHKVGGWYDTGLTERGQRQAKAIATALAEAGIHACSIYSSDLQRTAQTAEIIAQTLASPVILDQ
RLREMSYGAAEGRDQAWFDQQIVYPPNGVGRLDHRIYPSSENRREVATRVYAAMEMITATAEQQLVIVTHGFAATFVIAA
WLGMPLESVGLVAFRVTSGSISWLTQTAPFHNRMLDRLNDTQHLTNL

Sequences:

>Translated_207_residues
MAKIALVSHPESLHHIEHKVGGWYDTGLTERGQRQAKAIATALAEAGIHACSIYSSDLQRTAQTAEIIAQTLASPVILDQ
RLREMSYGAAEGRDQAWFDQQIVYPPNGVGRLDHRIYPSSENRREVATRVYAAMEMITATAEQQLVIVTHGFAATFVIAA
WLGMPLESVGLVAFRVTSGSISWLTQTAPFHNRMLDRLNDTQHLTNL
>Mature_206_residues
AKIALVSHPESLHHIEHKVGGWYDTGLTERGQRQAKAIATALAEAGIHACSIYSSDLQRTAQTAEIIAQTLASPVILDQR
LREMSYGAAEGRDQAWFDQQIVYPPNGVGRLDHRIYPSSENRREVATRVYAAMEMITATAEQQLVIVTHGFAATFVIAAW
LGMPLESVGLVAFRVTSGSISWLTQTAPFHNRMLDRLNDTQHLTNL

Specific function: Unknown

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790856, Length=174, Percent_Identity=36.2068965517241, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 22880; Mature: 22749

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIALVSHPESLHHIEHKVGGWYDTGLTERGQRQAKAIATALAEAGIHACSIYSSDLQR
CCCEEEECCCHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TAQTAEIIAQTLASPVILDQRLREMSYGAAEGRDQAWFDQQIVYPPNGVGRLDHRIYPSS
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCC
ENRREVATRVYAAMEMITATAEQQLVIVTHGFAATFVIAAWLGMPLESVGLVAFRVTSGS
CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHCEEEEEEECCC
ISWLTQTAPFHNRMLDRLNDTQHLTNL
EEEHCCCCCHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure 
AKIALVSHPESLHHIEHKVGGWYDTGLTERGQRQAKAIATALAEAGIHACSIYSSDLQR
CCEEEECCCHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TAQTAEIIAQTLASPVILDQRLREMSYGAAEGRDQAWFDQQIVYPPNGVGRLDHRIYPSS
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCC
ENRREVATRVYAAMEMITATAEQQLVIVTHGFAATFVIAAWLGMPLESVGLVAFRVTSGS
CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHCEEEEEEECCC
ISWLTQTAPFHNRMLDRLNDTQHLTNL
EEEHCCCCCHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA