Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900291

Identifier: 159900291

GI number: 159900291

Start: 4744437

End: 4744844

Strand: Direct

Name: 159900291

Synonym: Haur_3774

Alternate gene names: NA

Gene position: 4744437-4744844 (Clockwise)

Preceding gene: 159900285

Following gene: 159900292

Centisome position: 74.76

GC content: 47.3

Gene sequence:

>408_bases
ATGGATCAGCAACCGAAGGAGCAAAAGCGCGTGATTACACTAAGCGTTGGCATGATTATCAATCTTCTTCTGATTGGGTT
GGTCGCTGGAGTGGCGGGCGGCATGTTCGGAATTGGTGGCGGGGCGATTATGGTGCCAGCCATGGTTTTGTTGCTGGCGC
TTGATCAGAAATTTGCCACTGGCACATCGATTGGCGCACAGATCTTGCCAGTTGGCTTGCTCGGCGCTTTTGTTTACTAT
AAAGAGGGTAATTTGGATTGGCGAGCTTCGATCATTATTGCGCTTGGCTTGCTAGTTGGAACCTATTTTGGAGCCAAAAT
TGCTGCACCAATTTCTTCGGCGACCATGAAAAAGTTCTATGGCGCATTTCTGTTCATCATTGGTGCTCGCTATTTGTTTA
TGAAATAA

Upstream 100 bases:

>100_bases
TTGCGTCCATATAATAATTCCAAAGTATCAATCCTATTCGGTGCTAAGTTATTGGTCAGTTTGCGCTATTATAGCGTCAA
GCTGTCAATGGAGGAATGAC

Downstream 100 bases:

>100_bases
CTGCTGTTAGATAATTGGCAAGCATCCGCCATTAACCAACATAACGATTAGTTGATTGAGCCATCATTGCAAAACTATGC
TAAAACTGATCAACCATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFATGTSIGAQILPVGLLGAFVYY
KEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFYGAFLFIIGARYLFMK

Sequences:

>Translated_135_residues
MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFATGTSIGAQILPVGLLGAFVYY
KEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFYGAFLFIIGARYLFMK
>Mature_135_residues
MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFATGTSIGAQILPVGLLGAFVYY
KEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFYGAFLFIIGARYLFMK

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14260; Mature: 14260

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFAT
CCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC
GTSIGAQILPVGLLGAFVYYKEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFY
CCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GAFLFIIGARYLFMK
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFAT
CCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC
GTSIGAQILPVGLLGAFVYYKEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFY
CCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GAFLFIIGARYLFMK
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA