| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900291
Identifier: 159900291
GI number: 159900291
Start: 4744437
End: 4744844
Strand: Direct
Name: 159900291
Synonym: Haur_3774
Alternate gene names: NA
Gene position: 4744437-4744844 (Clockwise)
Preceding gene: 159900285
Following gene: 159900292
Centisome position: 74.76
GC content: 47.3
Gene sequence:
>408_bases ATGGATCAGCAACCGAAGGAGCAAAAGCGCGTGATTACACTAAGCGTTGGCATGATTATCAATCTTCTTCTGATTGGGTT GGTCGCTGGAGTGGCGGGCGGCATGTTCGGAATTGGTGGCGGGGCGATTATGGTGCCAGCCATGGTTTTGTTGCTGGCGC TTGATCAGAAATTTGCCACTGGCACATCGATTGGCGCACAGATCTTGCCAGTTGGCTTGCTCGGCGCTTTTGTTTACTAT AAAGAGGGTAATTTGGATTGGCGAGCTTCGATCATTATTGCGCTTGGCTTGCTAGTTGGAACCTATTTTGGAGCCAAAAT TGCTGCACCAATTTCTTCGGCGACCATGAAAAAGTTCTATGGCGCATTTCTGTTCATCATTGGTGCTCGCTATTTGTTTA TGAAATAA
Upstream 100 bases:
>100_bases TTGCGTCCATATAATAATTCCAAAGTATCAATCCTATTCGGTGCTAAGTTATTGGTCAGTTTGCGCTATTATAGCGTCAA GCTGTCAATGGAGGAATGAC
Downstream 100 bases:
>100_bases CTGCTGTTAGATAATTGGCAAGCATCCGCCATTAACCAACATAACGATTAGTTGATTGAGCCATCATTGCAAAACTATGC TAAAACTGATCAACCATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFATGTSIGAQILPVGLLGAFVYY KEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFYGAFLFIIGARYLFMK
Sequences:
>Translated_135_residues MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFATGTSIGAQILPVGLLGAFVYY KEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFYGAFLFIIGARYLFMK >Mature_135_residues MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFATGTSIGAQILPVGLLGAFVYY KEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFYGAFLFIIGARYLFMK
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14260; Mature: 14260
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFAT CCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC GTSIGAQILPVGLLGAFVYYKEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFY CCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GAFLFIIGARYLFMK HHHHHHHHHHHHHCC >Mature Secondary Structure MDQQPKEQKRVITLSVGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLLALDQKFAT CCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC GTSIGAQILPVGLLGAFVYYKEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFY CCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GAFLFIIGARYLFMK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA