| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yfiQ [C]
Identifier: 159900267
GI number: 159900267
Start: 4712746
End: 4714839
Strand: Direct
Name: yfiQ [C]
Synonym: Haur_3750
Alternate gene names: 159900267
Gene position: 4712746-4714839 (Clockwise)
Preceding gene: 159900266
Following gene: 159900268
Centisome position: 74.26
GC content: 53.1
Gene sequence:
>2094_bases ATGCTGGAGGAGATTTTCGCTCCGCAATCGGTGGCCGTGGTGGGAGCATCTCCCGATCCATCACGTCTTGGTCACCGTGT CCTCAAAAATGTAATCGACAATGGCTATAAAGGGCGAATCTACCCGATTCATCCTACTGCCAGTGCAGTTTTAGGCCAAA CGGCCTACCCGTCGGTCGCTGCTGTTCCCGCTGATGTTGAATTGGCAGTTTTGGTTATTCCACCGCAGCATGTCTTAAAT GTGGTCGAAGAATGCGGCCAAAAAGGCGTGCGCGGTTTAGTTGTGATCACCGCAGGATTCAAGGAAGTTGGCGGTGAAGG GGTTAAGCTTGAACACCAATTGGTAGAGATTGTGCAACGTTACGGCATGCGCATGGTCGGACCCAATTGTCTTGGTGTGA TTGATACAGTCAGCGATTTGAATGCTTCGTTTGCAGCATTAATGCCCGCTGATGGTGAAATTGCCTTTATGTCGCAATCG GGCGCGGTCTGTACCGCCATCCTCGATTGGAGCAAAGAGGCCAATATTGGCTTTTCGCGCTTCGTCAGCCTTGGCAATAA ATCCGATGTTGATGAAGTAGCATTGTTGCAGGCTTGGGGCAACGATCCCCAGAATAAAGTTATTTTGGCCTATTTGGAAG GCATTTCCGATGGCCCCGGCTTTATTCAGGCCGCCCGCGAAGTGACCAAACGTACACCCGTTATCGCGATCAAAAGCGGT ACGACGGCAGCAGGCACGAGAGCAATTTCCTCGCACACCGGCTCGTTGGCTGGCAGCGAGAGCGCTTACGAATCGGCATT TGGCCAAAGCGGGATCATTCGTGCTCGCACAATGGAGCAATTGTTTGATTTTGCCTTGGTGTTTGCCTACCAACCCTTGC TGACTGGCTCGCGAATTGCGATTGTCACCAATGCTGGCGGACCTGGAATTATCGCCACCGATGCGATTGAGCGGGCTGGC TTGCAAATGGCCGAATTTACGCCCGCAACCATCAGCCAACTTCAAGCTACGTTGCCAGCCACCGCCAATGTCTATAATCC AATCGATGTCATCGGCGATGCCAAAGCTGATCGCTATCGAATTGGGATTGAGGCGGCCTTGACCGACCCGAATGTTGATG CGGTGTTAGTGCTGTTTACCCCGCAAGCTGGCAGCGAAGCCGAAGCCACGGTTGAAGCCATGGCCGAACTTTCAGCCAAC CAAAGCAAACCAATTGTTGCCAGTTTTATGGGCGCATATAGCATTAAGCCTGCGCTCAAACTGCTCAATCAGTATAAAAT CCCCAACTACGAATTCCCTGAACGAGCGGTATCAGCCTTGGAAGCTATGTGGCAACATCGCCGCTGGCGTGAACAACCAG CCATGACTTACGCTCGCTTCGATGTTGATAAAGCGCATGTCCGCGAGTTATTTGCTCAAGTACGCGAGGCAGGGCGGGTT GAGCTTGGCGAAATCGAGGCCCGTGAAGTGATGGCAGCCTATGGCATGCGTTTGCCCGACAGTCGGCTTTCGCGTTCGCC CGAAGAAGCCGCCGAAATTGCCAAGGAAATTGGTTTTCCGGTGGTGATGAAAATTAGCTCGCCCGATATTCTGCACAAAA GCGATATTGGCGGGGTACGTGTGGGGATTGCCGACCCGCAAGCTGCCAGCGATAGCTACGAACTAATCGCCTATCGTGCC CGCAAATTCAGCCCAAATGCTCGGATTTGGGGGGTTTTGGTGCAGGAAATGGCGCGTAAAGGCCGCGAAGTCTTGGTTGG GGTCAGCCGTGATCCGCAATTTGGGGCGCTAATCGGCGTGGGCATGGGCGGTATTTATGTCGAAGTGCTCAAAGATGTTG TATTTCGACTTGCGCCCTTGAGCCGCGAAGAAGTGCGCGAACAACTGCGGGCAATTCGTTCGTTTCCATTGTTGCAGGGC GTGCGTGGCGAGCAGACCGCCGATTTAGAAGCCGTTGAAGATATTGTGCTGCGGGTCAGCCAATTGGTCAGCGACTTCCC CGAAATCGTCGAAATGGATATTAATCCGCTGGTCGTCTACAACCGTGGCGAAGGCGTAATCGTGCTCGATGCCCGCATTA TTCTGCAAGGATAG
Upstream 100 bases:
>100_bases GGCCATTCGATTTGCCTACTTCCGTGACATTTAGCCCATTCAAGCGCCGCCAGATGTGATATGCTCTAGGGGTGATCGAA GTAACCCGGAGGCAATCGCT
Downstream 100 bases:
>100_bases ATTTGAAAGTCAAAAGGCAAAGGGCAGAAATCAGAATTAAAGATCAATTCTATTAAATTAAGTCAGAAGCAAAATCGAAA TTGAGAATTAATCACATTCT
Product: acetyl coenzyme A synthetase subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 697
Protein sequence:
>697_residues MLEEIFAPQSVAVVGASPDPSRLGHRVLKNVIDNGYKGRIYPIHPTASAVLGQTAYPSVAAVPADVELAVLVIPPQHVLN VVEECGQKGVRGLVVITAGFKEVGGEGVKLEHQLVEIVQRYGMRMVGPNCLGVIDTVSDLNASFAALMPADGEIAFMSQS GAVCTAILDWSKEANIGFSRFVSLGNKSDVDEVALLQAWGNDPQNKVILAYLEGISDGPGFIQAAREVTKRTPVIAIKSG TTAAGTRAISSHTGSLAGSESAYESAFGQSGIIRARTMEQLFDFALVFAYQPLLTGSRIAIVTNAGGPGIIATDAIERAG LQMAEFTPATISQLQATLPATANVYNPIDVIGDAKADRYRIGIEAALTDPNVDAVLVLFTPQAGSEAEATVEAMAELSAN QSKPIVASFMGAYSIKPALKLLNQYKIPNYEFPERAVSALEAMWQHRRWREQPAMTYARFDVDKAHVRELFAQVREAGRV ELGEIEAREVMAAYGMRLPDSRLSRSPEEAAEIAKEIGFPVVMKISSPDILHKSDIGGVRVGIADPQAASDSYELIAYRA RKFSPNARIWGVLVQEMARKGREVLVGVSRDPQFGALIGVGMGGIYVEVLKDVVFRLAPLSREEVREQLRAIRSFPLLQG VRGEQTADLEAVEDIVLRVSQLVSDFPEIVEMDINPLVVYNRGEGVIVLDARIILQG
Sequences:
>Translated_697_residues MLEEIFAPQSVAVVGASPDPSRLGHRVLKNVIDNGYKGRIYPIHPTASAVLGQTAYPSVAAVPADVELAVLVIPPQHVLN VVEECGQKGVRGLVVITAGFKEVGGEGVKLEHQLVEIVQRYGMRMVGPNCLGVIDTVSDLNASFAALMPADGEIAFMSQS GAVCTAILDWSKEANIGFSRFVSLGNKSDVDEVALLQAWGNDPQNKVILAYLEGISDGPGFIQAAREVTKRTPVIAIKSG TTAAGTRAISSHTGSLAGSESAYESAFGQSGIIRARTMEQLFDFALVFAYQPLLTGSRIAIVTNAGGPGIIATDAIERAG LQMAEFTPATISQLQATLPATANVYNPIDVIGDAKADRYRIGIEAALTDPNVDAVLVLFTPQAGSEAEATVEAMAELSAN QSKPIVASFMGAYSIKPALKLLNQYKIPNYEFPERAVSALEAMWQHRRWREQPAMTYARFDVDKAHVRELFAQVREAGRV ELGEIEAREVMAAYGMRLPDSRLSRSPEEAAEIAKEIGFPVVMKISSPDILHKSDIGGVRVGIADPQAASDSYELIAYRA RKFSPNARIWGVLVQEMARKGREVLVGVSRDPQFGALIGVGMGGIYVEVLKDVVFRLAPLSREEVREQLRAIRSFPLLQG VRGEQTADLEAVEDIVLRVSQLVSDFPEIVEMDINPLVVYNRGEGVIVLDARIILQG >Mature_697_residues MLEEIFAPQSVAVVGASPDPSRLGHRVLKNVIDNGYKGRIYPIHPTASAVLGQTAYPSVAAVPADVELAVLVIPPQHVLN VVEECGQKGVRGLVVITAGFKEVGGEGVKLEHQLVEIVQRYGMRMVGPNCLGVIDTVSDLNASFAALMPADGEIAFMSQS GAVCTAILDWSKEANIGFSRFVSLGNKSDVDEVALLQAWGNDPQNKVILAYLEGISDGPGFIQAAREVTKRTPVIAIKSG TTAAGTRAISSHTGSLAGSESAYESAFGQSGIIRARTMEQLFDFALVFAYQPLLTGSRIAIVTNAGGPGIIATDAIERAG LQMAEFTPATISQLQATLPATANVYNPIDVIGDAKADRYRIGIEAALTDPNVDAVLVLFTPQAGSEAEATVEAMAELSAN QSKPIVASFMGAYSIKPALKLLNQYKIPNYEFPERAVSALEAMWQHRRWREQPAMTYARFDVDKAHVRELFAQVREAGRV ELGEIEAREVMAAYGMRLPDSRLSRSPEEAAEIAKEIGFPVVMKISSPDILHKSDIGGVRVGIADPQAASDSYELIAYRA RKFSPNARIWGVLVQEMARKGREVLVGVSRDPQFGALIGVGMGGIYVEVLKDVVFRLAPLSREEVREQLRAIRSFPLLQG VRGEQTADLEAVEDIVLRVSQLVSDFPEIVEMDINPLVVYNRGEGVIVLDARIILQG
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=695, Percent_Identity=30.7913669064748, Blast_Score=351, Evalue=1e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 75116; Mature: 75116
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEEIFAPQSVAVVGASPDPSRLGHRVLKNVIDNGYKGRIYPIHPTASAVLGQTAYPSVA CCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCE AVPADVELAVLVIPPQHVLNVVEECGQKGVRGLVVITAGFKEVGGEGVKLEHQLVEIVQR ECCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHH YGMRMVGPNCLGVIDTVSDLNASFAALMPADGEIAFMSQSGAVCTAILDWSKEANIGFSR CCCEECCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCHHH FVSLGNKSDVDEVALLQAWGNDPQNKVILAYLEGISDGPGFIQAAREVTKRTPVIAIKSG HHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECC TTAAGTRAISSHTGSLAGSESAYESAFGQSGIIRARTMEQLFDFALVFAYQPLLTGSRIA CCCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE IVTNAGGPGIIATDAIERAGLQMAEFTPATISQLQATLPATANVYNPIDVIGDAKADRYR EEECCCCCCEEEHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEE IGIEAALTDPNVDAVLVLFTPQAGSEAEATVEAMAELSANQSKPIVASFMGAYSIKPALK EEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLNQYKIPNYEFPERAVSALEAMWQHRRWREQPAMTYARFDVDKAHVRELFAQVREAGRV HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCC ELGEIEAREVMAAYGMRLPDSRLSRSPEEAAEIAKEIGFPVVMKISSPDILHKSDIGGVR EECCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCEE VGIADPQAASDSYELIAYRARKFSPNARIWGVLVQEMARKGREVLVGVSRDPQFGALIGV EECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEC GMGGIYVEVLKDVVFRLAPLSREEVREQLRAIRSFPLLQGVRGEQTADLEAVEDIVLRVS CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHH QLVSDFPEIVEMDINPLVVYNRGEGVIVLDARIILQG HHHHHCHHHHHCCCCEEEEEECCCEEEEEEEEEEECC >Mature Secondary Structure MLEEIFAPQSVAVVGASPDPSRLGHRVLKNVIDNGYKGRIYPIHPTASAVLGQTAYPSVA CCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCE AVPADVELAVLVIPPQHVLNVVEECGQKGVRGLVVITAGFKEVGGEGVKLEHQLVEIVQR ECCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHH YGMRMVGPNCLGVIDTVSDLNASFAALMPADGEIAFMSQSGAVCTAILDWSKEANIGFSR CCCEECCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCHHH FVSLGNKSDVDEVALLQAWGNDPQNKVILAYLEGISDGPGFIQAAREVTKRTPVIAIKSG HHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECC TTAAGTRAISSHTGSLAGSESAYESAFGQSGIIRARTMEQLFDFALVFAYQPLLTGSRIA CCCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE IVTNAGGPGIIATDAIERAGLQMAEFTPATISQLQATLPATANVYNPIDVIGDAKADRYR EEECCCCCCEEEHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEE IGIEAALTDPNVDAVLVLFTPQAGSEAEATVEAMAELSANQSKPIVASFMGAYSIKPALK EEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLNQYKIPNYEFPERAVSALEAMWQHRRWREQPAMTYARFDVDKAHVRELFAQVREAGRV HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCC ELGEIEAREVMAAYGMRLPDSRLSRSPEEAAEIAKEIGFPVVMKISSPDILHKSDIGGVR EECCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCEE VGIADPQAASDSYELIAYRARKFSPNARIWGVLVQEMARKGREVLVGVSRDPQFGALIGV EECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEC GMGGIYVEVLKDVVFRLAPLSREEVREQLRAIRSFPLLQGVRGEQTADLEAVEDIVLRVS CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHH QLVSDFPEIVEMDINPLVVYNRGEGVIVLDARIILQG HHHHHCHHHHHCCCCEEEEEECCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]