| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900266
Identifier: 159900266
GI number: 159900266
Start: 4712002
End: 4712679
Strand: Direct
Name: 159900266
Synonym: Haur_3749
Alternate gene names: NA
Gene position: 4712002-4712679 (Clockwise)
Preceding gene: 159900265
Following gene: 159900267
Centisome position: 74.24
GC content: 49.41
Gene sequence:
>678_bases ATGCTACGCAACAACGAACTATGGATCGCGATTGCCATCGCGGTAACCTCAACGATCATCGCGCGGTTGCCAGTACTGCA TTGGCTGGTTTATCCGTTTGAGCTGTTCAATACCTTTGTGCATGAGCTTGGCCATGGCTTCGCTTCATTGCTGACTGGCG GCAAACTTGATCGGCTTGAAGTGTATTCAAATGGCGAGGGCGTGGCCTGGACTGCTGGCGGCATTCGCTGGATTGTGGCC AGTGCTGGCTATTTGAGTAGCGCCTTGGTTGGCGGCGCATTATTAATTCTTTCAGCACGGGGCATTAGCGCCGATCGCGT CACATTAATTATTGGAATTGCATTGTTTGTGCTGTGTGGCTTGTTTGTTCGCAATATTTTTGGAATTATTGTTGGTATTT TGCTGGCGGGTGCATTCATTGCCGCCAGTTATAAATTGGCGCTGCACTGGAACGAATGGCTGCTGTTGGTGTTGGGCGTG CAAACCATCTTAAATGCGCTCGATAGTTTATGGGATTTGCTGCGACTTTCATCCTACCGTCGTCACGTAACCAGCGATGC CCTCATTATGCAACAAGCAACTGGAGTTCCAGCAATTTTATGGGCATTGGTGTGGAGCGGCATCGCCTTATTGATTTTGT GGCAGGCCATTCGATTTGCCTACTTCCGTGACATTTAG
Upstream 100 bases:
>100_bases ATAGCGTGGCTCATGCCGATTGGGTGGCATTGACTGCAATTGGATATTCACGAAGTGTCCTTCGTGGATCTACCGCTATA CTAGGCCCGTGGAGAACACC
Downstream 100 bases:
>100_bases CCCATTCAAGCGCCGCCAGATGTGATATGCTCTAGGGGTGATCGAAGTAACCCGGAGGCAATCGCTATGCTGGAGGAGAT TTTCGCTCCGCAATCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLRNNELWIAIAIAVTSTIIARLPVLHWLVYPFELFNTFVHELGHGFASLLTGGKLDRLEVYSNGEGVAWTAGGIRWIVA SAGYLSSALVGGALLILSARGISADRVTLIIGIALFVLCGLFVRNIFGIIVGILLAGAFIAASYKLALHWNEWLLLVLGV QTILNALDSLWDLLRLSSYRRHVTSDALIMQQATGVPAILWALVWSGIALLILWQAIRFAYFRDI
Sequences:
>Translated_225_residues MLRNNELWIAIAIAVTSTIIARLPVLHWLVYPFELFNTFVHELGHGFASLLTGGKLDRLEVYSNGEGVAWTAGGIRWIVA SAGYLSSALVGGALLILSARGISADRVTLIIGIALFVLCGLFVRNIFGIIVGILLAGAFIAASYKLALHWNEWLLLVLGV QTILNALDSLWDLLRLSSYRRHVTSDALIMQQATGVPAILWALVWSGIALLILWQAIRFAYFRDI >Mature_225_residues MLRNNELWIAIAIAVTSTIIARLPVLHWLVYPFELFNTFVHELGHGFASLLTGGKLDRLEVYSNGEGVAWTAGGIRWIVA SAGYLSSALVGGALLILSARGISADRVTLIIGIALFVLCGLFVRNIFGIIVGILLAGAFIAASYKLALHWNEWLLLVLGV QTILNALDSLWDLLRLSSYRRHVTSDALIMQQATGVPAILWALVWSGIALLILWQAIRFAYFRDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24698; Mature: 24698
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNNELWIAIAIAVTSTIIARLPVLHWLVYPFELFNTFVHELGHGFASLLTGGKLDRLE CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VYSNGEGVAWTAGGIRWIVASAGYLSSALVGGALLILSARGISADRVTLIIGIALFVLCG EEECCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LFVRNIFGIIVGILLAGAFIAASYKLALHWNEWLLLVLGVQTILNALDSLWDLLRLSSYR HHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHVTSDALIMQQATGVPAILWALVWSGIALLILWQAIRFAYFRDI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRNNELWIAIAIAVTSTIIARLPVLHWLVYPFELFNTFVHELGHGFASLLTGGKLDRLE CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VYSNGEGVAWTAGGIRWIVASAGYLSSALVGGALLILSARGISADRVTLIIGIALFVLCG EEECCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LFVRNIFGIIVGILLAGAFIAASYKLALHWNEWLLLVLGVQTILNALDSLWDLLRLSSYR HHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHVTSDALIMQQATGVPAILWALVWSGIALLILWQAIRFAYFRDI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA