| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900250
Identifier: 159900250
GI number: 159900250
Start: 4692470
End: 4693507
Strand: Reverse
Name: 159900250
Synonym: Haur_3733
Alternate gene names: NA
Gene position: 4693507-4692470 (Counterclockwise)
Preceding gene: 159900251
Following gene: 159900249
Centisome position: 73.95
GC content: 39.79
Gene sequence:
>1038_bases ATGCCTATCCTTACCAACCTCAAACCGCGTTGGCACACCGCGTTGAGCATCGGCATGTTGCTAGCCGTGCTTGCTAGCGC CGCTGGCTACTTCTATTGGGCAAGCCGACCATTTACGCTTGAGCAACTAGCGCCTGTGGATACACCAACCCTAGTGCATA CAATCAAAGCTGACCCTAGAAAACCATTTGATCGGATTGTTCAATGGAACTCGCGTGGCGATCGATTAGCCGTATCAAGC GATAAAAATAATATTCTGATTTATTCAAGTGCTGGTGAACTCGTGGCTGATTTTAGATCCCACCTTTTTATGGGGCTTGG GATTAACGAGCTAGAATGGCATCCAACCAAGGATATTTTGGCTGTTGCCTACGACGAAAGATTGGTGTTATGGTCAGCCG ATGGCACGATCATCAAACAAATTAATAGTGACATAACATTTGCGTTTTGGGATATAGATTGGAATCAACAAACCGAACAA TTAGCAGTTAATCAATATTATGCATTTGATCGTAAATACTATCATCAAATTGCCCTATTTGATGATACAGGTGCATTGAT TAAACAAATATCTCAATCAATTAATTTTACACGAGATATCAAATGGTTGGATGAAAATCAGATTGTAATCCATACTGCTA ACGACGAAATTCTTGTATTAGATACCGAAAAAGAAATATTAAGTAGCTTAATTGCAGGTAAATATGCCGAAATGGATGTT GATCAACAGCATCATACTATTGCTGCCGTTCCAACATCGCTAAAAGCTATTACTCTATGGAAGAATAATCAACTAACTGA ATTGCCAGTTGATCGGATAGCTGGTGATGTTCTTGCGATTAACCCTGCCAGTAACCATACGATTATCTATCAACCAACAT CTGAATTGCGAATGTTGAATCATCAAAGCCATAACTTTGAATTATACCCTACGATTAAGTTTGATGAAACGATTTACTAT GTTGCTTGGCATCCGTCTAAGCTAATTTTGGCAATTCTGCTCACTGATGAGATTCAGTTGTGGCAGTTTCCTGAGTAA
Upstream 100 bases:
>100_bases GTTGTACCAAGGGAGTTTTTTTATCCACCAGCAAATCATGCAACATTTTGGAGCAACGTCTTGTATGATCTGTGTAACGA TAGCTTGAGTAGGAGAGAAT
Downstream 100 bases:
>100_bases CCACGAGAGGAATTGATAATGCAAACCCGAATTCGTTGGCATACTGTGCTGAGCATTGGCATGTTGCTAGCCGTGCTTGC TAGTGCCGCTGGCTACTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MPILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPRKPFDRIVQWNSRGDRLAVSS DKNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDILAVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQ LAVNQYYAFDRKYYHQIALFDDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDV DQQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLNHQSHNFELYPTIKFDETIYY VAWHPSKLILAILLTDEIQLWQFPE
Sequences:
>Translated_345_residues MPILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPRKPFDRIVQWNSRGDRLAVSS DKNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDILAVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQ LAVNQYYAFDRKYYHQIALFDDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDV DQQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLNHQSHNFELYPTIKFDETIYY VAWHPSKLILAILLTDEIQLWQFPE >Mature_344_residues PILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPRKPFDRIVQWNSRGDRLAVSSD KNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDILAVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQL AVNQYYAFDRKYYHQIALFDDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDVD QQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLNHQSHNFELYPTIKFDETIYYV AWHPSKLILAILLTDEIQLWQFPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39591; Mature: 39460
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPR CCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHCCCCCCCCEEEEECCCCC KPFDRIVQWNSRGDRLAVSSDKNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDIL CCHHHHEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHEEECCCCCCCCCCCCCCEE AVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQLAVNQYYAFDRKYYHQIALF EEEECCEEEEEECCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEE DDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDV CCCHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEEEECHHHHHHHHHCCCCCCCCC DQQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLN CCCCCEEEECCCCEEEEEEECCCCEEECCHHHHCCCEEEECCCCCCEEEECCHHHHHHHC HQSHNFELYPTIKFDETIYYVAWHPSKLILAILLTDEIQLWQFPE CCCCCEEEEEEEEECCEEEEEEECCCCEEEEEEEECCEEEEECCC >Mature Secondary Structure PILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPR CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHCCCCCCCCEEEEECCCCC KPFDRIVQWNSRGDRLAVSSDKNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDIL CCHHHHEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHEEECCCCCCCCCCCCCCEE AVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQLAVNQYYAFDRKYYHQIALF EEEECCEEEEEECCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEE DDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDV CCCHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEEEECHHHHHHHHHCCCCCCCCC DQQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLN CCCCCEEEECCCCEEEEEEECCCCEEECCHHHHCCCEEEECCCCCCEEEECCHHHHHHHC HQSHNFELYPTIKFDETIYYVAWHPSKLILAILLTDEIQLWQFPE CCCCCEEEEEEEEECCEEEEEEECCCCEEEEEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA