| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yflK [H]
Identifier: 159900247
GI number: 159900247
Start: 4690112
End: 4690771
Strand: Direct
Name: yflK [H]
Synonym: Haur_3730
Alternate gene names: 159900247
Gene position: 4690112-4690771 (Clockwise)
Preceding gene: 159900246
Following gene: 159900258
Centisome position: 73.9
GC content: 52.27
Gene sequence:
>660_bases GTGATTACGATTGAAACTTTAGCGATCGGCCAGCCCCAAACCTACCACGATGCCAAAGGCGCTTGGTCATCGGCGATTGG CCGCCAAGCGATCACGACACCTGTGCGCTTGGAGCAATTGGGCCATGTTGGTGATGCGGTGGCCGACACCAAAAACCATG GTGGCCCCGATAAAGCAGTGTGTTGCCAGCCCGCTAGCCATTACCCACTGTGGCAAGCAGAATATGGCTTAGCCAATGAT CACCCGATGTTGCAAGCCAGCGGTATCGGCGAAAATTGGACGCTCAGCAACGTAACCGAGCAAGATGTGTGTATTGGCGA TCAGTTCAAGGTTGGTAGCGCGATTGTGCAAATTTGTGCGCCACGCTACCCCTGCACCAAACAAGATCGCAAGCTTGGCC TCGATGGTTTGCAACAACGCACAATTGCTACCTTGCGCAGTGGTTTTTATCTGCGGGTTTTACAAGCAGGCGAGGTTCAA GTTGGCGATGGATTGGAGTTGATCGAGCGTCCACATCCCACGATTACGGTGCATAAAGTCAATCAACATCTGCATCACGA GCGCGATCAAGCCTTTGGTCGCCAACTGTTGGTGGTGGACGAACTGGCTGCTAGTTGGAAACGAATTATTCAAATGATTA TTCCCAGCTTGGCGCAGTAA
Upstream 100 bases:
>100_bases AAAACGATTTGCTCACGCCAACGCTCAAAATTCGTCGCCGCCAAATCTACGAACGCTTCGCCAAGAGTTTTGAGCAATTG TACAAACGTTAGAGGATTTT
Downstream 100 bases:
>100_bases GCATGCCCTAACCCCGCTGAGCGAGGGGAATCACCAAACCAAAAGCCCCTCGCCCGCCGCCGTGGGCGAGGGGTTGGGGG TGAGGGAATGTCAATCTAGT
Product: MOSC domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MITIETLAIGQPQTYHDAKGAWSSAIGRQAITTPVRLEQLGHVGDAVADTKNHGGPDKAVCCQPASHYPLWQAEYGLAND HPMLQASGIGENWTLSNVTEQDVCIGDQFKVGSAIVQICAPRYPCTKQDRKLGLDGLQQRTIATLRSGFYLRVLQAGEVQ VGDGLELIERPHPTITVHKVNQHLHHERDQAFGRQLLVVDELAASWKRIIQMIIPSLAQ
Sequences:
>Translated_219_residues MITIETLAIGQPQTYHDAKGAWSSAIGRQAITTPVRLEQLGHVGDAVADTKNHGGPDKAVCCQPASHYPLWQAEYGLAND HPMLQASGIGENWTLSNVTEQDVCIGDQFKVGSAIVQICAPRYPCTKQDRKLGLDGLQQRTIATLRSGFYLRVLQAGEVQ VGDGLELIERPHPTITVHKVNQHLHHERDQAFGRQLLVVDELAASWKRIIQMIIPSLAQ >Mature_219_residues MITIETLAIGQPQTYHDAKGAWSSAIGRQAITTPVRLEQLGHVGDAVADTKNHGGPDKAVCCQPASHYPLWQAEYGLAND HPMLQASGIGENWTLSNVTEQDVCIGDQFKVGSAIVQICAPRYPCTKQDRKLGLDGLQQRTIATLRSGFYLRVLQAGEVQ VGDGLELIERPHPTITVHKVNQHLHHERDQAFGRQLLVVDELAASWKRIIQMIIPSLAQ
Specific function: Unknown
COG id: COG2258
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MOSC domain [H]
Homologues:
Organism=Escherichia coli, GI87082350, Length=205, Percent_Identity=32.1951219512195, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005163 - InterPro: IPR005302 - InterPro: IPR015808 - InterPro: IPR011037 [H]
Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]
EC number: NA
Molecular weight: Translated: 24083; Mature: 24083
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIETLAIGQPQTYHDAKGAWSSAIGRQAITTPVRLEQLGHVGDAVADTKNHGGPDKAV CEEEEEEECCCCCCCCCCCCHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCE CCQPASHYPLWQAEYGLANDHPMLQASGIGENWTLSNVTEQDVCIGDQFKVGSAIVQICA EECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHC PRYPCTKQDRKLGLDGLQQRTIATLRSGFYLRVLQAGEVQVGDGLELIERPHPTITVHKV CCCCCCCCHHHCCHHHHHHHHHHHHHCCEEEEEEECCCEEECCCHHHHHCCCCEEEEEHH NQHLHHERDQAFGRQLLVVDELAASWKRIIQMIIPSLAQ HHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITIETLAIGQPQTYHDAKGAWSSAIGRQAITTPVRLEQLGHVGDAVADTKNHGGPDKAV CEEEEEEECCCCCCCCCCCCHHHHHHCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCE CCQPASHYPLWQAEYGLANDHPMLQASGIGENWTLSNVTEQDVCIGDQFKVGSAIVQICA EECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHC PRYPCTKQDRKLGLDGLQQRTIATLRSGFYLRVLQAGEVQVGDGLELIERPHPTITVHKV CCCCCCCCHHHCCHHHHHHHHHHHHHCCEEEEEEECCCEEECCCHHHHHCCCCEEEEEHH NQHLHHERDQAFGRQLLVVDELAASWKRIIQMIIPSLAQ HHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]