| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900244
Identifier: 159900244
GI number: 159900244
Start: 4686973
End: 4687488
Strand: Reverse
Name: 159900244
Synonym: Haur_3727
Alternate gene names: NA
Gene position: 4687488-4686973 (Counterclockwise)
Preceding gene: 159900248
Following gene: 159900243
Centisome position: 73.86
GC content: 50.97
Gene sequence:
>516_bases ATGGCACATTCAGATGTTTACGATCCGATTCATAACGAATTATGGGCTTTATCAGTCATGGCCAGCACACTCGATAATGT GCGAGTCCGAGTTTCGGGCTTGCAACCTGATGTTCAACAAGAGCGACCGCAAGGTTTTGAGCGTTCGTTGGCCCATGTGA TTGCCAGCCTCCGCCGTGGCGAAGCTGAATTAATCGAAGTTTTCGAAAAAGCCTTGAAAGCTGAAAATCCCAGCCTCAAC ACGATTTTCAATCGCTACCCTAAGGCGTTTGTGCTCAATCCAGCCGAGGAGCTTGGTAGCTTTATGGATAGCCGCGAAAC CAGCTTGGGCTTGTTGCGCAGCCTAACCAGTGAGCAGTGGGAGCGCAAAGTCAACGATCCTGAGCGCGGTTTGGTCAGTT TAAGCCAATTGGCGGTCGAACGCGCCAACCTCGACCTTGAAGAAATGGATTATATGGCCCAATTGCGCCAAGCGATCTTG CGGCTTGAGCCAATTCAAGGCAACGACGCTCGATGA
Upstream 100 bases:
>100_bases GACTATTACCAATCGATCGTTAGCCAATCCGCTGCCAAATGGCGAGTCTTTGCTATACTTAGCACTGCATGTCGATTGCC AATTAAGGGGATATTTGATC
Downstream 100 bases:
>100_bases GGGTGCTTTGGTTAATTGGTGTTTTATCTAGCACTGGGCTGGCGCTGTTGAGCCTGCCACAGCTACTCCGAGATGCTCAG CAACGACGCTGGGCAGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAHSDVYDPIHNELWALSVMASTLDNVRVRVSGLQPDVQQERPQGFERSLAHVIASLRRGEAELIEVFEKALKAENPSLN TIFNRYPKAFVLNPAEELGSFMDSRETSLGLLRSLTSEQWERKVNDPERGLVSLSQLAVERANLDLEEMDYMAQLRQAIL RLEPIQGNDAR
Sequences:
>Translated_171_residues MAHSDVYDPIHNELWALSVMASTLDNVRVRVSGLQPDVQQERPQGFERSLAHVIASLRRGEAELIEVFEKALKAENPSLN TIFNRYPKAFVLNPAEELGSFMDSRETSLGLLRSLTSEQWERKVNDPERGLVSLSQLAVERANLDLEEMDYMAQLRQAIL RLEPIQGNDAR >Mature_170_residues AHSDVYDPIHNELWALSVMASTLDNVRVRVSGLQPDVQQERPQGFERSLAHVIASLRRGEAELIEVFEKALKAENPSLNT IFNRYPKAFVLNPAEELGSFMDSRETSLGLLRSLTSEQWERKVNDPERGLVSLSQLAVERANLDLEEMDYMAQLRQAILR LEPIQGNDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19416; Mature: 19285
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHSDVYDPIHNELWALSVMASTLDNVRVRVSGLQPDVQQERPQGFERSLAHVIASLRRG CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCHHHHHHHHHHHHHCC EAELIEVFEKALKAENPSLNTIFNRYPKAFVLNPAEELGSFMDSRETSLGLLRSLTSEQW HHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH ERKVNDPERGLVSLSQLAVERANLDLEEMDYMAQLRQAILRLEPIQGNDAR HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AHSDVYDPIHNELWALSVMASTLDNVRVRVSGLQPDVQQERPQGFERSLAHVIASLRRG CCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCHHHHHHHHHHHHHCC EAELIEVFEKALKAENPSLNTIFNRYPKAFVLNPAEELGSFMDSRETSLGLLRSLTSEQW HHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH ERKVNDPERGLVSLSQLAVERANLDLEEMDYMAQLRQAILRLEPIQGNDAR HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA