| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900229
Identifier: 159900229
GI number: 159900229
Start: 4668653
End: 4669867
Strand: Reverse
Name: 159900229
Synonym: Haur_3712
Alternate gene names: NA
Gene position: 4669867-4668653 (Counterclockwise)
Preceding gene: 159900230
Following gene: 159900228
Centisome position: 73.58
GC content: 52.26
Gene sequence:
>1215_bases ATGCTAAAAACACTCTACATTACCTATGATGGCTTACTCGATCCACTTGGTCAAACTCAAATCTTGCCCTATTTAGAGGG CTTGGCTGCTCAGCATGGCCATCAATTTGTGATTCTTTCGTTTGAAAAGGCGGCGCGTTGGGCCGATCTGGCGCGGCGGC AAGCTTTGATTGAGCGTTTGCAAAGCCACGGCTTGGTTTGGCTGCCATTGCGCTATCATCAACGCCCAATTCTCCCAGCA ACCTTGTATGATCTGGCATTGGGCTTGTGGACGGCTAGCGTGGCAGTGTGGCGCTATCGAATTCAAGCTTTGCACATTCG CTCGACCGTGCCAATGACGATTGCCCTCTTGCTCAAACGCTGGTTCAAACTACCCTTGCTGTTCGATCTGCGCGGTTTTT GGGCCGATGAACGCGCCGATTTGGGCATGCCGCGCATAGGCTTGGTCTATCGTTTGCTCAAAAAACTTGAGCGTGCCAGC CTGCAACAAGCTGAGCAGATTGTGACCCTAACCCAGCAAAGTTTGCCCTATTTGGCCGAACATAGCCAAACACCGCACAT CGCCAATAAAACCACAATTATTCCATGCTCGGCCAATCTGCAAGTTTGGCAGCGCGATTTGGCCGCTCGAACCCAAATTC GCCAAGCCCTTGGTTGGCAAACCAACCCAATTTTGGTCTATAGTGGCTCGCTTGGTGGCGGGTATCGTAGCCGCGATATG GCCGAATGTTTTGCCTCGTGGCTGCACGCTGAGCCAGATTTGCGCTGGTTGGTACTCTCCAACCAAGATCCCCAGCCGTT GATCACAGCCTTGCAGGATTTGAATGTCCCCGCAGAATCTTATACAATCCGTGGTGTGGCCAGCAATGAGGTGGCTCAAT GGCTCAGCGTGGCCGATGCAGCACTTTCCTTAATCACGCCCAGCTATGCCAAAATTGCCTCGTCGCCAACCAAATTTGGC GAATATTTGGCCTGTGGGCTGCCAATTTTTAGTAATGCAGGCATCGGCGATAGCGATCAATTATTCGCTCAAGGCGTGGC AATCAAGCTTGATGATTTTAACGTAGCGGCCTATCAAGCAGCGTGGCAAACCTATCAAGCCTTGCGCGAACAGCCCGATT TGGCTCAACGCTGTCGGGCCTTGGCCGAACGTGAGTTTGATTTGCAGCTGGCGGTTGAACGCTACGCCGCCTGTTATCGA GAGTTAGAAGCATGA
Upstream 100 bases:
>100_bases AGAGGGGTTGGGGGTGAGGGCACAGATCAATCCTTATCTCTTTTGGTATTCTTCGTGGTTTCAACCTAGCCCCTAACCCC CGACCCCCAACAAGAAACCT
Downstream 100 bases:
>100_bases ACCAACCGCACACTGTACTCTGTTTGACAGCCTATCAACCAATGCTAACAGCCAGTGTGCGCTATCGAATTATGCCCTAT GCTCCGGCTTTGGCAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERLQSHGLVWLPLRYHQRPILPA TLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKRWFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERAS LQQAEQIVTLTQQSLPYLAEHSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADAALSLITPSYAKIASSPTKFG EYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQAAWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYR ELEA
Sequences:
>Translated_404_residues MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERLQSHGLVWLPLRYHQRPILPA TLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKRWFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERAS LQQAEQIVTLTQQSLPYLAEHSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADAALSLITPSYAKIASSPTKFG EYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQAAWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYR ELEA >Mature_404_residues MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERLQSHGLVWLPLRYHQRPILPA TLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKRWFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERAS LQQAEQIVTLTQQSLPYLAEHSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADAALSLITPSYAKIASSPTKFG EYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQAAWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYR ELEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45570; Mature: 45570
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERL CCEEEEEEECCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHH QSHGLVWLPLRYHQRPILPATLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKR HHCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH WFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERASLQQAEQIVTLTQQSLPYLAE HHCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH HSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHH AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADA HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHHH ALSLITPSYAKIASSPTKFGEYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQA HHHHHCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHH AWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYRELEA HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERL CCEEEEEEECCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHH QSHGLVWLPLRYHQRPILPATLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKR HHCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH WFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERASLQQAEQIVTLTQQSLPYLAE HHCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH HSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHH AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADA HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHHH ALSLITPSYAKIASSPTKFGEYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQA HHHHHCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHH AWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYRELEA HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA