Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900229

Identifier: 159900229

GI number: 159900229

Start: 4668653

End: 4669867

Strand: Reverse

Name: 159900229

Synonym: Haur_3712

Alternate gene names: NA

Gene position: 4669867-4668653 (Counterclockwise)

Preceding gene: 159900230

Following gene: 159900228

Centisome position: 73.58

GC content: 52.26

Gene sequence:

>1215_bases
ATGCTAAAAACACTCTACATTACCTATGATGGCTTACTCGATCCACTTGGTCAAACTCAAATCTTGCCCTATTTAGAGGG
CTTGGCTGCTCAGCATGGCCATCAATTTGTGATTCTTTCGTTTGAAAAGGCGGCGCGTTGGGCCGATCTGGCGCGGCGGC
AAGCTTTGATTGAGCGTTTGCAAAGCCACGGCTTGGTTTGGCTGCCATTGCGCTATCATCAACGCCCAATTCTCCCAGCA
ACCTTGTATGATCTGGCATTGGGCTTGTGGACGGCTAGCGTGGCAGTGTGGCGCTATCGAATTCAAGCTTTGCACATTCG
CTCGACCGTGCCAATGACGATTGCCCTCTTGCTCAAACGCTGGTTCAAACTACCCTTGCTGTTCGATCTGCGCGGTTTTT
GGGCCGATGAACGCGCCGATTTGGGCATGCCGCGCATAGGCTTGGTCTATCGTTTGCTCAAAAAACTTGAGCGTGCCAGC
CTGCAACAAGCTGAGCAGATTGTGACCCTAACCCAGCAAAGTTTGCCCTATTTGGCCGAACATAGCCAAACACCGCACAT
CGCCAATAAAACCACAATTATTCCATGCTCGGCCAATCTGCAAGTTTGGCAGCGCGATTTGGCCGCTCGAACCCAAATTC
GCCAAGCCCTTGGTTGGCAAACCAACCCAATTTTGGTCTATAGTGGCTCGCTTGGTGGCGGGTATCGTAGCCGCGATATG
GCCGAATGTTTTGCCTCGTGGCTGCACGCTGAGCCAGATTTGCGCTGGTTGGTACTCTCCAACCAAGATCCCCAGCCGTT
GATCACAGCCTTGCAGGATTTGAATGTCCCCGCAGAATCTTATACAATCCGTGGTGTGGCCAGCAATGAGGTGGCTCAAT
GGCTCAGCGTGGCCGATGCAGCACTTTCCTTAATCACGCCCAGCTATGCCAAAATTGCCTCGTCGCCAACCAAATTTGGC
GAATATTTGGCCTGTGGGCTGCCAATTTTTAGTAATGCAGGCATCGGCGATAGCGATCAATTATTCGCTCAAGGCGTGGC
AATCAAGCTTGATGATTTTAACGTAGCGGCCTATCAAGCAGCGTGGCAAACCTATCAAGCCTTGCGCGAACAGCCCGATT
TGGCTCAACGCTGTCGGGCCTTGGCCGAACGTGAGTTTGATTTGCAGCTGGCGGTTGAACGCTACGCCGCCTGTTATCGA
GAGTTAGAAGCATGA

Upstream 100 bases:

>100_bases
AGAGGGGTTGGGGGTGAGGGCACAGATCAATCCTTATCTCTTTTGGTATTCTTCGTGGTTTCAACCTAGCCCCTAACCCC
CGACCCCCAACAAGAAACCT

Downstream 100 bases:

>100_bases
ACCAACCGCACACTGTACTCTGTTTGACAGCCTATCAACCAATGCTAACAGCCAGTGTGCGCTATCGAATTATGCCCTAT
GCTCCGGCTTTGGCAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERLQSHGLVWLPLRYHQRPILPA
TLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKRWFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERAS
LQQAEQIVTLTQQSLPYLAEHSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM
AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADAALSLITPSYAKIASSPTKFG
EYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQAAWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYR
ELEA

Sequences:

>Translated_404_residues
MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERLQSHGLVWLPLRYHQRPILPA
TLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKRWFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERAS
LQQAEQIVTLTQQSLPYLAEHSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM
AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADAALSLITPSYAKIASSPTKFG
EYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQAAWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYR
ELEA
>Mature_404_residues
MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERLQSHGLVWLPLRYHQRPILPA
TLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKRWFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERAS
LQQAEQIVTLTQQSLPYLAEHSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM
AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADAALSLITPSYAKIASSPTKFG
EYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQAAWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYR
ELEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45570; Mature: 45570

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERL
CCEEEEEEECCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
QSHGLVWLPLRYHQRPILPATLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKR
HHCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
WFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERASLQQAEQIVTLTQQSLPYLAE
HHCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
HSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHH
AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADA
HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHHH
ALSLITPSYAKIASSPTKFGEYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQA
HHHHHCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHH
AWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYRELEA
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKTLYITYDGLLDPLGQTQILPYLEGLAAQHGHQFVILSFEKAARWADLARRQALIERL
CCEEEEEEECCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
QSHGLVWLPLRYHQRPILPATLYDLALGLWTASVAVWRYRIQALHIRSTVPMTIALLLKR
HHCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
WFKLPLLFDLRGFWADERADLGMPRIGLVYRLLKKLERASLQQAEQIVTLTQQSLPYLAE
HHCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
HSQTPHIANKTTIIPCSANLQVWQRDLAARTQIRQALGWQTNPILVYSGSLGGGYRSRDM
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHH
AECFASWLHAEPDLRWLVLSNQDPQPLITALQDLNVPAESYTIRGVASNEVAQWLSVADA
HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHHH
ALSLITPSYAKIASSPTKFGEYLACGLPIFSNAGIGDSDQLFAQGVAIKLDDFNVAAYQA
HHHHHCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHH
AWQTYQALREQPDLAQRCRALAEREFDLQLAVERYAACYRELEA
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA