| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900212
Identifier: 159900212
GI number: 159900212
Start: 4647782
End: 4648393
Strand: Reverse
Name: 159900212
Synonym: Haur_3695
Alternate gene names: NA
Gene position: 4648393-4647782 (Counterclockwise)
Preceding gene: 159900213
Following gene: 159900208
Centisome position: 73.24
GC content: 49.18
Gene sequence:
>612_bases ATGATTATCAACGTAGAACTAGCCTTGTTGGTGAGTGGCGGCATTGTGCTCGAAGTTCCGCTGCCGCCGCCACAGGCCGC TTGGAATTTCGATGCCTTGCTGGATTATCATGGGGATGGTCGTTTTTTATGTTGGTGGTGGCATACGCAATACAATCACC TGATTGCGCTAGCCAACGATGGCTGGTTGCGAGCAGAGGCTGGCTTGTGGCACATGAATTTTGTGCAAGATTTACGTGAT GCCTGTTTGTTGAACCCTCAATTGGCATTTGGCAATGTGTTTGGCGAGCAACCAACCCATGCCTTATTGTATGATCGCGA GCAGCATTGTTTGTTGGCGGTAACCTTGACCGCTGTTTTAGAACTCCTCGACCATTCAATCCATGAGCTAGAACCACAAC AGATTAACTATCGTGAGATCAAACGCGTCTTGCTGGCACTAACAACCAAGCCGGATCTGCTTAGCTATGCGGTGAACCAG CTCCACATTTATGAGGCGAAAACTGGCGCTGGGGCGTTTAATCTGCTGTGCGAGCCTTGTAACGATTGGCGTATGTGTCA ATTTAGTGCTTGGCTCAATGCTGCGATTCGCAACCAGATTGGCGCTAACTAA
Upstream 100 bases:
>100_bases ATGAGGCTATGGCTGTGTGTAGTCGAAACATTCTCGTTTTGCGTGCTCAGTTAACGGACTACTGGTGGCTCGCTGACCTG CAAATGATCGCAGGTGACCT
Downstream 100 bases:
>100_bases GCCGATCATGGGTTTTTCCATGATCGGCTAGCACATTTAGGCGCGGCTATCCCAAATGACATCGGGCACGTTGCGCACAA AATTCTCATAGCGAGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MIINVELALLVSGGIVLEVPLPPPQAAWNFDALLDYHGDGRFLCWWWHTQYNHLIALANDGWLRAEAGLWHMNFVQDLRD ACLLNPQLAFGNVFGEQPTHALLYDREQHCLLAVTLTAVLELLDHSIHELEPQQINYREIKRVLLALTTKPDLLSYAVNQ LHIYEAKTGAGAFNLLCEPCNDWRMCQFSAWLNAAIRNQIGAN
Sequences:
>Translated_203_residues MIINVELALLVSGGIVLEVPLPPPQAAWNFDALLDYHGDGRFLCWWWHTQYNHLIALANDGWLRAEAGLWHMNFVQDLRD ACLLNPQLAFGNVFGEQPTHALLYDREQHCLLAVTLTAVLELLDHSIHELEPQQINYREIKRVLLALTTKPDLLSYAVNQ LHIYEAKTGAGAFNLLCEPCNDWRMCQFSAWLNAAIRNQIGAN >Mature_203_residues MIINVELALLVSGGIVLEVPLPPPQAAWNFDALLDYHGDGRFLCWWWHTQYNHLIALANDGWLRAEAGLWHMNFVQDLRD ACLLNPQLAFGNVFGEQPTHALLYDREQHCLLAVTLTAVLELLDHSIHELEPQQINYREIKRVLLALTTKPDLLSYAVNQ LHIYEAKTGAGAFNLLCEPCNDWRMCQFSAWLNAAIRNQIGAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23068; Mature: 23068
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINVELALLVSGGIVLEVPLPPPQAAWNFDALLDYHGDGRFLCWWWHTQYNHLIALAND CEEEEEEEEEEECCEEEEECCCCCCCCCCCHHEEEECCCCCEEEEEEECCCCEEEEEECC GWLRAEAGLWHMNFVQDLRDACLLNPQLAFGNVFGEQPTHALLYDREQHCLLAVTLTAVL CEEEECCCEEHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHH ELLDHSIHELEPQQINYREIKRVLLALTTKPDLLSYAVNQLHIYEAKTGAGAFNLLCEPC HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCEEEEEECCC NDWRMCQFSAWLNAAIRNQIGAN CCCCEEHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIINVELALLVSGGIVLEVPLPPPQAAWNFDALLDYHGDGRFLCWWWHTQYNHLIALAND CEEEEEEEEEEECCEEEEECCCCCCCCCCCHHEEEECCCCCEEEEEEECCCCEEEEEECC GWLRAEAGLWHMNFVQDLRDACLLNPQLAFGNVFGEQPTHALLYDREQHCLLAVTLTAVL CEEEECCCEEHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHH ELLDHSIHELEPQQINYREIKRVLLALTTKPDLLSYAVNQLHIYEAKTGAGAFNLLCEPC HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCEEEEEECCC NDWRMCQFSAWLNAAIRNQIGAN CCCCEEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA