| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ntaB [H]
Identifier: 159900208
GI number: 159900208
Start: 4643757
End: 4644233
Strand: Reverse
Name: ntaB [H]
Synonym: Haur_3691
Alternate gene names: 159900208
Gene position: 4644233-4643757 (Counterclockwise)
Preceding gene: 159900212
Following gene: 159900207
Centisome position: 73.18
GC content: 50.94
Gene sequence:
>477_bases ATGACGCTTGACCCTGCTTTGTTTCGGCAAGCAATGAGCCGTTTTGCCAGCGGTGTAACTGTAGTGACAACGATTGTGGA TGCGAAGCCCTATGGTTTAACGGTTAGCGCCTTTGCCTCGCTCTCTTTAGATCCAGCTTTGGCGATTATCGCGATTGATA AACGCTCGCCAATGCACGATCTGTTGCTCCAAGCTCAGGCTTTTGCGATCAATATCTTGAGCAACGAGCAAGAATCGTTG TCGCGCCACTTTGCTGGCCCGCAAAAACACGATTGGTCGGAAATTGCGGCGGCGGCTGGCAATCGCAGTATTCCATTGCT CGACGGAGCTTTGGCTAACATGGAATGCGGGCTGTTTCAGGCAGTTGATGGCGGCGATCATACGATTTTTATTGGTCAAG TTGAGCATGTAACCCTGCGCGATGGTCTACCCTTGCTCTATTATCGTGGCGCTTACCACGATCTTGTTCAGCGTTGA
Upstream 100 bases:
>100_bases CTTCGTGGATCAAACTGGCCCCTGATCCCTAGCCCCTAGCCTTGCATTGACATTTGAACCTCGTTACAATAGGCGTAGCA ATCTGTATGAGGAATATTCG
Downstream 100 bases:
>100_bases AACGAGCACGCAGCATGTGGTTGACCTTAATCTTATTTGTGGTTGGGCTGGGGCTGGCATTTGGCTTAGGAGTGATGGTT GGCCGTCAACGCGGCTTCGC
Product: flavin reductase domain-containing protein
Products: NAD(+); reduced flavin [C]
Alternate protein names: NTA monooxygenase component B; NTA-MO B [H]
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTLDPALFRQAMSRFASGVTVVTTIVDAKPYGLTVSAFASLSLDPALAIIAIDKRSPMHDLLLQAQAFAINILSNEQESL SRHFAGPQKHDWSEIAAAAGNRSIPLLDGALANMECGLFQAVDGGDHTIFIGQVEHVTLRDGLPLLYYRGAYHDLVQR
Sequences:
>Translated_158_residues MTLDPALFRQAMSRFASGVTVVTTIVDAKPYGLTVSAFASLSLDPALAIIAIDKRSPMHDLLLQAQAFAINILSNEQESL SRHFAGPQKHDWSEIAAAAGNRSIPLLDGALANMECGLFQAVDGGDHTIFIGQVEHVTLRDGLPLLYYRGAYHDLVQR >Mature_157_residues TLDPALFRQAMSRFASGVTVVTTIVDAKPYGLTVSAFASLSLDPALAIIAIDKRSPMHDLLLQAQAFAINILSNEQESLS RHFAGPQKHDWSEIAAAAGNRSIPLLDGALANMECGLFQAVDGGDHTIFIGQVEHVTLRDGLPLLYYRGAYHDLVQR
Specific function: Hydroxylation of nitrilotriacetate [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081819, Length=159, Percent_Identity=28.3018867924528, Blast_Score=68, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011991 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 17118; Mature: 16987
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDPALFRQAMSRFASGVTVVTTIVDAKPYGLTVSAFASLSLDPALAIIAIDKRSPMHD CCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHCCCCCEEEEEEECCCCCHHH LLLQAQAFAINILSNEQESLSRHFAGPQKHDWSEIAAAAGNRSIPLLDGALANMECGLFQ HHHHHHHHEEEEECCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCEEE AVDGGDHTIFIGQVEHVTLRDGLPLLYYRGAYHDLVQR EECCCCCEEEEEEEEEEEECCCCCEEEECCCHHHHHCC >Mature Secondary Structure TLDPALFRQAMSRFASGVTVVTTIVDAKPYGLTVSAFASLSLDPALAIIAIDKRSPMHD CCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHCCCCCEEEEEEECCCCCHHH LLLQAQAFAINILSNEQESLSRHFAGPQKHDWSEIAAAAGNRSIPLLDGALANMECGLFQ HHHHHHHHEEEEECCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCEEE AVDGGDHTIFIGQVEHVTLRDGLPLLYYRGAYHDLVQR EECCCCCEEEEEEEEEEEECCCCCEEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892809; 9023192; 1735711 [H]