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The map label for this gene is araQ [H]

Identifier: 159900156

GI number: 159900156

Start: 4577407

End: 4578285

Strand: Reverse

Name: araQ [H]

Synonym: Haur_3639

Alternate gene names: 159900156

Gene position: 4578285-4577407 (Counterclockwise)

Preceding gene: 159900157

Following gene: 159900155

Centisome position: 72.14

GC content: 50.85

Gene sequence:

>879_bases
ATGGCAAAAACCAAGCTTTCCGATGAACTTGTGCCTAAGCCCTTTGTGAGCCGCTTCCAGCGTGGCGCGATCTATCTCTT
ATTGGTCGTTGGGGCATTTTTATCACTATTCCCCTTCTACTATATGTTTGTCCAAGCCTCGCAGCCCTCAAGCGAAGTGC
TGCGCTTTCCACCACATTTGTGGTTTGGCAGCGCTGCTTGGTCGAATATTCAAGGCCTGTTTGCCAATGGCTTTGGGCGT
TCGCTGTTCAATTCGGCATTTATTGCGGTGGTGTATGCCAGCCTCAGCGTTTTTATCGCTTCGCTGGCGGGCTATGCTTT
TGCCAAATTCCGCTTTCGCGGGCGCTCAATCTTGTTTGGCATGTTTTTGTTAGTTTTGATGATTCCCTATCATGTCACCG
CCGTGCCACTGTTTCAGCTCATGGCCAAAATTACGCTCTTTGGCGATCCAACCTGGATCAGCAGCTATCAAGCGGTGATT
TTGCCTGCCCTAGCTAATCCATTTGGCATCTTCTTGATGCGCCAAAGCATGCAATCCTTGCCTGATGATCTGCTTGATGC
TGCGCGAATTGATGGTGCTGGCGAGTGGCGGGTTTTCACCAGCGTGGCGCTGCCAACGATGCGCCCAACCTTGGCGGCCT
TGGCAATTTATTCGTTTATGTTTCAATGGAACAGCTTCTTCTGGCCGTTGATTATTATGCGCGACAAAGCCATGGAAACC
CTGCCCGTGCGGATCAACGCCCTCGTTGGCTTATCAATTATCGATTATGGCCAATTGATGATGGGCACAGCGCTCACCAC
CCTACCAATTATGATGATCTTTATCGCCTTCCAGCGCCAATTCATCTCCGGCGCACTCGCAGGCGCAGTCAAAGGGTAA

Upstream 100 bases:

>100_bases
GTTTAATTATGCTTCAGCAATTGCCTACGCCATGGTCTTGATCATCGCCGTCTTTTCGCTTTTACAATTTCGCATCGCCC
AGCGCGGGGAGGACTAAGCG

Downstream 100 bases:

>100_bases
AATCAAAAGGCAGAAGGCAAAAATCAAAAGGCAGAACCAAGGATATTTTCAAGCTGCATAGGCATTTTGCCCTTTGACTT
TTGCCTTTTGACTTTCTAAA

Product: monosaccharide-transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAKTKLSDELVPKPFVSRFQRGAIYLLLVVGAFLSLFPFYYMFVQASQPSSEVLRFPPHLWFGSAAWSNIQGLFANGFGR
SLFNSAFIAVVYASLSVFIASLAGYAFAKFRFRGRSILFGMFLLVLMIPYHVTAVPLFQLMAKITLFGDPTWISSYQAVI
LPALANPFGIFLMRQSMQSLPDDLLDAARIDGAGEWRVFTSVALPTMRPTLAALAIYSFMFQWNSFFWPLIIMRDKAMET
LPVRINALVGLSIIDYGQLMMGTALTTLPIMMIFIAFQRQFISGALAGAVKG

Sequences:

>Translated_292_residues
MAKTKLSDELVPKPFVSRFQRGAIYLLLVVGAFLSLFPFYYMFVQASQPSSEVLRFPPHLWFGSAAWSNIQGLFANGFGR
SLFNSAFIAVVYASLSVFIASLAGYAFAKFRFRGRSILFGMFLLVLMIPYHVTAVPLFQLMAKITLFGDPTWISSYQAVI
LPALANPFGIFLMRQSMQSLPDDLLDAARIDGAGEWRVFTSVALPTMRPTLAALAIYSFMFQWNSFFWPLIIMRDKAMET
LPVRINALVGLSIIDYGQLMMGTALTTLPIMMIFIAFQRQFISGALAGAVKG
>Mature_291_residues
AKTKLSDELVPKPFVSRFQRGAIYLLLVVGAFLSLFPFYYMFVQASQPSSEVLRFPPHLWFGSAAWSNIQGLFANGFGRS
LFNSAFIAVVYASLSVFIASLAGYAFAKFRFRGRSILFGMFLLVLMIPYHVTAVPLFQLMAKITLFGDPTWISSYQAVIL
PALANPFGIFLMRQSMQSLPDDLLDAARIDGAGEWRVFTSVALPTMRPTLAALAIYSFMFQWNSFFWPLIIMRDKAMETL
PVRINALVGLSIIDYGQLMMGTALTTLPIMMIFIAFQRQFISGALAGAVKG

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=281, Percent_Identity=30.6049822064057, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=25.531914893617, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1790464, Length=212, Percent_Identity=27.3584905660377, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32548; Mature: 32417

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTKLSDELVPKPFVSRFQRGAIYLLLVVGAFLSLFPFYYMFVQASQPSSEVLRFPPHL
CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC
WFGSAAWSNIQGLFANGFGRSLFNSAFIAVVYASLSVFIASLAGYAFAKFRFRGRSILFG
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MFLLVLMIPYHVTAVPLFQLMAKITLFGDPTWISSYQAVILPALANPFGIFLMRQSMQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
PDDLLDAARIDGAGEWRVFTSVALPTMRPTLAALAIYSFMFQWNSFFWPLIIMRDKAMET
CHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHEECCCHHHH
LPVRINALVGLSIIDYGQLMMGTALTTLPIMMIFIAFQRQFISGALAGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKTKLSDELVPKPFVSRFQRGAIYLLLVVGAFLSLFPFYYMFVQASQPSSEVLRFPPHL
CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC
WFGSAAWSNIQGLFANGFGRSLFNSAFIAVVYASLSVFIASLAGYAFAKFRFRGRSILFG
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MFLLVLMIPYHVTAVPLFQLMAKITLFGDPTWISSYQAVILPALANPFGIFLMRQSMQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
PDDLLDAARIDGAGEWRVFTSVALPTMRPTLAALAIYSFMFQWNSFFWPLIIMRDKAMET
CHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHEECCCHHHH
LPVRINALVGLSIIDYGQLMMGTALTTLPIMMIFIAFQRQFISGALAGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]