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The map label for this gene is yqgF [C]

Identifier: 159900150

GI number: 159900150

Start: 4568057

End: 4568533

Strand: Reverse

Name: yqgF [C]

Synonym: Haur_3633

Alternate gene names: 159900150

Gene position: 4568533-4568057 (Counterclockwise)

Preceding gene: 159900151

Following gene: 159900145

Centisome position: 71.98

GC content: 53.46

Gene sequence:

>477_bases
ATGAGTGAGCGTCCAACCCATGGCCGAATCATCGCTTTGGATGTTGGCAACAAACGAATCGGGGTGGCTATGTGCGACCC
CGACCGAATTATTGCTAGCGGCCAGCCGACCTTGCCAGCACAGCCAACTGATAAAGCCTATGCTCAGCTTTTGCACATGA
TTACTGAGCACGAGGTGGTTGAAGTTGTGATTGGCTTGCCTTTGACCTTGCGTGGCGAGGTTGGGGCACAGGCCAAAGCG
GTGCAAGCCTTCAGTCGTGGGCTGGAAAAACGCACCAAGATTCCGATTACTTTGTATGATGAGCGCTTTACCAGCGTTGA
GGCTGAGCGTTCGCTCGAAGCCATGGGCATCAAAAAAAGCAAACATCGCGATCATGTCGATGAATTAGCTGCGATTTTGA
TTCTGCAAGATTATATGAGCTCGATTGCGCCGCCCCGCCCGCGCTACCACGACCCCGACCACGACGATTGGGAGTGA

Upstream 100 bases:

>100_bases
AAGCTTTGCGCGAAAGTGGCTTGATTGGCGATATTGTGTCAGTGCCCGAAGTTGAGCGCTTGCCCGTTGATCCAGCCGAA
ATTAATATTCAGGTGCAGGA

Downstream 100 bases:

>100_bases
ACTGATCGTTGTCACAATCAGTTGAGGTTGCAATAAAGGCTAAGCCCCCTCACCCATTGCCCTCTGCGGCGGGTGAGGGG
CTTTTGGTTTGGTGGTTCCC

Product: Holliday junction resolvase YqgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSERPTHGRIIALDVGNKRIGVAMCDPDRIIASGQPTLPAQPTDKAYAQLLHMITEHEVVEVVIGLPLTLRGEVGAQAKA
VQAFSRGLEKRTKIPITLYDERFTSVEAERSLEAMGIKKSKHRDHVDELAAILILQDYMSSIAPPRPRYHDPDHDDWE

Sequences:

>Translated_158_residues
MSERPTHGRIIALDVGNKRIGVAMCDPDRIIASGQPTLPAQPTDKAYAQLLHMITEHEVVEVVIGLPLTLRGEVGAQAKA
VQAFSRGLEKRTKIPITLYDERFTSVEAERSLEAMGIKKSKHRDHVDELAAILILQDYMSSIAPPRPRYHDPDHDDWE
>Mature_157_residues
SERPTHGRIIALDVGNKRIGVAMCDPDRIIASGQPTLPAQPTDKAYAQLLHMITEHEVVEVVIGLPLTLRGEVGAQAKAV
QAFSRGLEKRTKIPITLYDERFTSVEAERSLEAMGIKKSKHRDHVDELAAILILQDYMSSIAPPRPRYHDPDHDDWE

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=132, Percent_Identity=28.030303030303, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 17670; Mature: 17539

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERPTHGRIIALDVGNKRIGVAMCDPDRIIASGQPTLPAQPTDKAYAQLLHMITEHEVV
CCCCCCCCEEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
EVVIGLPLTLRGEVGAQAKAVQAFSRGLEKRTKIPITLYDERFTSVEAERSLEAMGIKKS
HHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCH
KHRDHVDELAAILILQDYMSSIAPPRPRYHDPDHDDWE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SERPTHGRIIALDVGNKRIGVAMCDPDRIIASGQPTLPAQPTDKAYAQLLHMITEHEVV
CCCCCCCEEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
EVVIGLPLTLRGEVGAQAKAVQAFSRGLEKRTKIPITLYDERFTSVEAERSLEAMGIKKS
HHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCH
KHRDHVDELAAILILQDYMSSIAPPRPRYHDPDHDDWE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA