| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900133
Identifier: 159900133
GI number: 159900133
Start: 4546048
End: 4547796
Strand: Reverse
Name: 159900133
Synonym: Haur_3616
Alternate gene names: NA
Gene position: 4547796-4546048 (Counterclockwise)
Preceding gene: 159900135
Following gene: 159900128
Centisome position: 71.66
GC content: 53.34
Gene sequence:
>1749_bases ATGCGGCGTTATTTGCTCGCCGCCGTCGCCATTGCCCTCTTGATTATGCCAGTATTGACGATTAATGCTGGTCCAGAGCA AGTTTGGGTTGATGATTTAACGGCTGGCAGCTTTGATGGGTTGGTCGGCAGTGGCACTATCACCCTCGCTCCCAACGCCC CTCCCGCTCCTGCATTCGTTGGTGATTATCCGCAAGCAGGTAGTTACCTTTCTTCCGAGCATCAATTTGAATCAGTCGTT GCTGCGGTTGTAATTGATACCGATACAACCTTGACGACTGGGAGTGCTGTGCGCTTTGATGTGCGTGGCAAAAATCCCAG CGGTTCGTGGCAGATGTGGCAAGAGGCTCCACGTGGTGGCCGAGTTGCGCTCGAACGCCCAAGTAGCGTGATTCAATATC GTTTGTGGCTTTTGGCCAATGGCGAATCACCACGGGCGCGTTCGGTCACAATGGTGGCTGAATGGTCAGATGGTATGACG ATTCAGGCTGAATCGCAAGCACCAACCTACCGAATTTATGCCACTCGCGAGGGTTTGGTCGGCCATCGGACGGCTAACGG CCATATCATTCGCCCATACGATCAATTTGTGGCCTTGCCTTCATGGCGAGCACTCTCATCGTATCGGGGTTATGAATACC AAGTGCGCGTGACCTACAAAGGTCGCTCCAAGGTTGTGCCAGTTTGGGATGTAGGGCCGTGGAATACCCGTGATGACTAT TGGTCAACCAATCGTCAGTCGTGGAAAGATTTGCCACGCGGTTTGCCCGAGGCTCAAGCCGCCTATTATGATGGCTACAA TGGCGGGCGCGATGAGCGTGGTCGCCGCCCGAATTTACCCAACGGCATTGATATCGCCGATGGAACATTCTGGGATTTAG GTATTCCGGATAATGCCTGGGTTGAAGTAACATTCTTGTGGGAAGGCTACGATCCTGGGGCTGGCACGCCTGCGGCAACC CCAACCCCGAATGTTACCGCAACTCCATTGCCAGTGGCCTTGCCGCCAGCAGGCTCGATCTTGGTCGATAATCGCGATAA TAGCTTCCGCGAAATGCAAGGCACATGGTTCGATGCTCGCTGTGGTTTCAATGGTTCACACCGTTGGACCAAGAGCGTCG CCAACGAAAGCCAAGTTGATAACCTTGGGGTTTGGAAAGCGCCAATTACCAACCCTGGTTTCTACGAGGTGATGGCCTAT ATTCCGCCGTGTGGCGAGCCAGCCACCAAAAATGCCACCTACGTGATTGCTCACGACGGCAGCAATACCAAAGTACGCGT CGATCAAGAGGCCAATCAGAATAAATGGTATTCTTTGGGGGTCTATTACTTCAAGGGTGGTAATGAAATTCGGCTCGATG ATGTGACTGGTGAAGAGGGCTTGAGCGTGCGTTACGATGCCATGGCTTGGTTGCCGCGCTCCGATAACACTGCACCAAAC GCTACCATCATCGATGTCAAGGATCTCGGCGCGGGCCGCTACGAGGTGCATTGGAACGGCCAAGACGATAGCACAGGGGT GGCTAGTTTCGATGTACAGGTGCAACGCAATGGTGGTGAATGGGTCGATTGGTTGGTCACAACGACCGAACTGAAAGATA CCTTTATCATTGATGTAAGCGCTGCTGATGCCGAAAATAGTACCTATGGCTTTCGTGCGCGGGCGCGTGACTGGGCTGGT AATACTGGCGAGTTCCCGCCGAATGCCCAAGCTACCTCAGCTGAACCGTTGATGATTCAACAACCCTAA
Upstream 100 bases:
>100_bases ATGTTTGTTGCCATGAACGCTAAGAACGTGGAGTTTATGGCCATGTATTGCCTTGCTGTGGTTCGTGGGCTGAATTCACA CTTGTAGGAGGTTGTCGATT
Downstream 100 bases:
>100_bases AATTGGGCAACGAACGCAATGACCAAAACTCCCGTTATCAAGCTTGATAACGGGAGTTTTGCGCTGTGTACCTCACGGGC TGATCGGCTCGTTCTAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MRRYLLAAVAIALLIMPVLTINAGPEQVWVDDLTAGSFDGLVGSGTITLAPNAPPAPAFVGDYPQAGSYLSSEHQFESVV AAVVIDTDTTLTTGSAVRFDVRGKNPSGSWQMWQEAPRGGRVALERPSSVIQYRLWLLANGESPRARSVTMVAEWSDGMT IQAESQAPTYRIYATREGLVGHRTANGHIIRPYDQFVALPSWRALSSYRGYEYQVRVTYKGRSKVVPVWDVGPWNTRDDY WSTNRQSWKDLPRGLPEAQAAYYDGYNGGRDERGRRPNLPNGIDIADGTFWDLGIPDNAWVEVTFLWEGYDPGAGTPAAT PTPNVTATPLPVALPPAGSILVDNRDNSFREMQGTWFDARCGFNGSHRWTKSVANESQVDNLGVWKAPITNPGFYEVMAY IPPCGEPATKNATYVIAHDGSNTKVRVDQEANQNKWYSLGVYYFKGGNEIRLDDVTGEEGLSVRYDAMAWLPRSDNTAPN ATIIDVKDLGAGRYEVHWNGQDDSTGVASFDVQVQRNGGEWVDWLVTTTELKDTFIIDVSAADAENSTYGFRARARDWAG NTGEFPPNAQATSAEPLMIQQP
Sequences:
>Translated_582_residues MRRYLLAAVAIALLIMPVLTINAGPEQVWVDDLTAGSFDGLVGSGTITLAPNAPPAPAFVGDYPQAGSYLSSEHQFESVV AAVVIDTDTTLTTGSAVRFDVRGKNPSGSWQMWQEAPRGGRVALERPSSVIQYRLWLLANGESPRARSVTMVAEWSDGMT IQAESQAPTYRIYATREGLVGHRTANGHIIRPYDQFVALPSWRALSSYRGYEYQVRVTYKGRSKVVPVWDVGPWNTRDDY WSTNRQSWKDLPRGLPEAQAAYYDGYNGGRDERGRRPNLPNGIDIADGTFWDLGIPDNAWVEVTFLWEGYDPGAGTPAAT PTPNVTATPLPVALPPAGSILVDNRDNSFREMQGTWFDARCGFNGSHRWTKSVANESQVDNLGVWKAPITNPGFYEVMAY IPPCGEPATKNATYVIAHDGSNTKVRVDQEANQNKWYSLGVYYFKGGNEIRLDDVTGEEGLSVRYDAMAWLPRSDNTAPN ATIIDVKDLGAGRYEVHWNGQDDSTGVASFDVQVQRNGGEWVDWLVTTTELKDTFIIDVSAADAENSTYGFRARARDWAG NTGEFPPNAQATSAEPLMIQQP >Mature_582_residues MRRYLLAAVAIALLIMPVLTINAGPEQVWVDDLTAGSFDGLVGSGTITLAPNAPPAPAFVGDYPQAGSYLSSEHQFESVV AAVVIDTDTTLTTGSAVRFDVRGKNPSGSWQMWQEAPRGGRVALERPSSVIQYRLWLLANGESPRARSVTMVAEWSDGMT IQAESQAPTYRIYATREGLVGHRTANGHIIRPYDQFVALPSWRALSSYRGYEYQVRVTYKGRSKVVPVWDVGPWNTRDDY WSTNRQSWKDLPRGLPEAQAAYYDGYNGGRDERGRRPNLPNGIDIADGTFWDLGIPDNAWVEVTFLWEGYDPGAGTPAAT PTPNVTATPLPVALPPAGSILVDNRDNSFREMQGTWFDARCGFNGSHRWTKSVANESQVDNLGVWKAPITNPGFYEVMAY IPPCGEPATKNATYVIAHDGSNTKVRVDQEANQNKWYSLGVYYFKGGNEIRLDDVTGEEGLSVRYDAMAWLPRSDNTAPN ATIIDVKDLGAGRYEVHWNGQDDSTGVASFDVQVQRNGGEWVDWLVTTTELKDTFIIDVSAADAENSTYGFRARARDWAG NTGEFPPNAQATSAEPLMIQQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64098; Mature: 64098
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRYLLAAVAIALLIMPVLTINAGPEQVWVDDLTAGSFDGLVGSGTITLAPNAPPAPAFV CCHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCEECCCEEEECCCCCCCCCCC GDYPQAGSYLSSEHQFESVVAAVVIDTDTTLTTGSAVRFDVRGKNPSGSWQMWQEAPRGG CCCCCCCCCCCCHHHHHEEEEEEEEECCCCEECCCEEEEEEECCCCCCCHHHHHHCCCCC RVALERPSSVIQYRLWLLANGESPRARSVTMVAEWSDGMTIQAESQAPTYRIYATREGLV EEEEECCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEECCCCE GHRTANGHIIRPYDQFVALPSWRALSSYRGYEYQVRVTYKGRSKVVPVWDVGPWNTRDDY EEECCCCCEECCHHHHEECCCCHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCC WSTNRQSWKDLPRGLPEAQAAYYDGYNGGRDERGRRPNLPNGIDIADGTFWDLGIPDNAW CCCCCHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCE VEVTFLWEGYDPGAGTPAATPTPNVTATPLPVALPPAGSILVDNRDNSFREMQGTWFDAR EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCHHHHCCCEEEEE CGFNGSHRWTKSVANESQVDNLGVWKAPITNPGFYEVMAYIPPCGEPATKNATYVIAHDG CCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCEEHEEECCCCCCCCCCCEEEEEEECC SNTKVRVDQEANQNKWYSLGVYYFKGGNEIRLDDVTGEEGLSVRYDAMAWLPRSDNTAPN CCCEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCC ATIIDVKDLGAGRYEVHWNGQDDSTGVASFDVQVQRNGGEWVDWLVTTTELKDTFIIDVS EEEEEEHHCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCEEEEEEEE AADAENSTYGFRARARDWAGNTGEFPPNAQATSAEPLMIQQP CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MRRYLLAAVAIALLIMPVLTINAGPEQVWVDDLTAGSFDGLVGSGTITLAPNAPPAPAFV CCHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCEECCCEEEECCCCCCCCCCC GDYPQAGSYLSSEHQFESVVAAVVIDTDTTLTTGSAVRFDVRGKNPSGSWQMWQEAPRGG CCCCCCCCCCCCHHHHHEEEEEEEEECCCCEECCCEEEEEEECCCCCCCHHHHHHCCCCC RVALERPSSVIQYRLWLLANGESPRARSVTMVAEWSDGMTIQAESQAPTYRIYATREGLV EEEEECCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEECCCCE GHRTANGHIIRPYDQFVALPSWRALSSYRGYEYQVRVTYKGRSKVVPVWDVGPWNTRDDY EEECCCCCEECCHHHHEECCCCHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCC WSTNRQSWKDLPRGLPEAQAAYYDGYNGGRDERGRRPNLPNGIDIADGTFWDLGIPDNAW CCCCCHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCE VEVTFLWEGYDPGAGTPAATPTPNVTATPLPVALPPAGSILVDNRDNSFREMQGTWFDAR EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCHHHHCCCEEEEE CGFNGSHRWTKSVANESQVDNLGVWKAPITNPGFYEVMAYIPPCGEPATKNATYVIAHDG CCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCEEHEEECCCCCCCCCCCEEEEEEECC SNTKVRVDQEANQNKWYSLGVYYFKGGNEIRLDDVTGEEGLSVRYDAMAWLPRSDNTAPN CCCEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCC ATIIDVKDLGAGRYEVHWNGQDDSTGVASFDVQVQRNGGEWVDWLVTTTELKDTFIIDVS EEEEEEHHCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCEEEEEEEE AADAENSTYGFRARARDWAGNTGEFPPNAQATSAEPLMIQQP CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA