| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is cphA [H]
Identifier: 159900082
GI number: 159900082
Start: 4481447
End: 4483063
Strand: Direct
Name: cphA [H]
Synonym: Haur_3565
Alternate gene names: 159900082
Gene position: 4481447-4483063 (Clockwise)
Preceding gene: 159900081
Following gene: 159900083
Centisome position: 70.61
GC content: 53.31
Gene sequence:
>1617_bases ATGCTGGAGTTTCGTGATATTCGGGCCTTGGAAGGGCCAAATGGCTATGATCATGCCCCGGTTGCTTTAGTTCGGCTGGT TGGCGAAACTGTGGAGATCGATGCTTGGCTCAAGCAAGTGGCGCTGGCGTGTGCCAACTATGGCATTGCCCATACTGAGC CTGTTTTACAACAACACCCTAGTTTGGGTGAATATGCGATTACTTGGCGCACCGCCACGCCCGAAAGTTTGGCTCTGCTG CTTGAGCAATTGGCGGGCACGGATGCAGCCGCTAGCTCGGCTGAAATTCAGGCTATGTTGGAGCAGGAGCAAATTCCAAA CCCATTGCACGATTTAGCCAAGCAACACTTGCCACTTTGGCGCGAGGCTGAAGCATGGTGGGTTGGCTATGGTCGTTATC GCCAAAACGCTGCTCAATTCGACCTTAGCACGTACCAAACCTTGCCAATTATTGCGATTAGCGGTACTAACGGCAAAACC ACCACGACCCGCTTGATCGATTTTAGCCTGCGCACGGCGGGCTACCAAACAGGCCGCACCGATACCGACGGCGTTTGGAT TAACAACCAAGCAATCGAGCAAGGCGATTGGACAGGTTTTGGTGGAGCACAACGGGTGCTGAGCCATCCAGCGGTCGAGG TGGCTGTGTTGGAAACTGCTCGCGGTGGTTTATTGCGCCGTGGCTTGGCCTTCAACCATTGCGAGATTGCGGTTTTAACC AATGTTGCCGACGATCATCTGCCAGATCGCGGTTTGGCAACCGTCGCCGAAATGGCTCATTTCAAGGCCACCATCGTGCG AGCCGCCCAAAAAGCCGTTATTTTGAATGCTGATGATCCAGTGTTAGTTGAGGTGGTTGCCCCTCAAGCAACAGCGCCAA TTATCTGGTTTAGTTTGCAAGCCACCAATCCCTTGATTGTGCAAGCGCAACAGAACCAACAAGCCTGTTTGTATCTCGAT GCTAACCAATTAATCCTGGCCAGTGCTGGCCAAACTCAAGCATTAATTGCGGTGGCTGAGTTGCCCTTGAGCTTTGGCGG AGTGGCGCAGCATAATATCGCCAATGCTTTGGCTGCCGCTGCCGCACTGTTTGCGTTTGGATTAAGCGCTGGCCAGATTG CGCTTGGCCTCGCCGGATTTCAACCAAACGCCGAGCATAATCCAGGCCGTTTGAATCAATTTCAACGCGATGGCATCACC TTGTTAATTGATTATGCGCACAATAGCGATGGGCTGCGGGTATTATTAGCCAGCGCCGCGCCCCTTCGCGCCGCCAATCG CCATATTGCCATGGTGTTCAGTGGCACTGGCGATCGTACCGACCAACAAATTCAAGAACAAATGACGATCATCGCTCAGC ATGTCGATCGGTTGATCCTCAAACGTGATCCATGGTTTTTGCGTGGGCGCGAACCAGGCGTTTTAGAGCCATTGATGATC GCTGCGGCAACTGCTGCTGGCCTTGATCCTGCCGCAATCGCTGAGCTAGAGGGCGACGAAGCTGCGTTTAATGAGCTGAC CCAACCAGCCAAGGCGGGCGATGTGCTGATTTGGATTGTTTATAAAGATCGGGCTAGCAAAATTGCCATCGCCCAAGCGT GGGAGCGCAACCCATGA
Upstream 100 bases:
>100_bases AATGCTTAGGCTGTGATTGAGTAGCAGCAAATCAATTGCATTTTTCAGCTGTCCATGTACCATTAAGCCTAGATTCGTGC TGAATTAAGGTTGGTGGCCT
Downstream 100 bases:
>100_bases GCGAAGCCATGAGCGAGTCTGTAAGCATCCAAGAGGAATACCTGTGGAATAGCGCCCGTGAGGATCTGCCGCCCAAAAAA CCATTGGTTGAAATTGGTTG
Product: Mur ligase middle domain-containing protein
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MLEFRDIRALEGPNGYDHAPVALVRLVGETVEIDAWLKQVALACANYGIAHTEPVLQQHPSLGEYAITWRTATPESLALL LEQLAGTDAAASSAEIQAMLEQEQIPNPLHDLAKQHLPLWREAEAWWVGYGRYRQNAAQFDLSTYQTLPIIAISGTNGKT TTTRLIDFSLRTAGYQTGRTDTDGVWINNQAIEQGDWTGFGGAQRVLSHPAVEVAVLETARGGLLRRGLAFNHCEIAVLT NVADDHLPDRGLATVAEMAHFKATIVRAAQKAVILNADDPVLVEVVAPQATAPIIWFSLQATNPLIVQAQQNQQACLYLD ANQLILASAGQTQALIAVAELPLSFGGVAQHNIANALAAAAALFAFGLSAGQIALGLAGFQPNAEHNPGRLNQFQRDGIT LLIDYAHNSDGLRVLLASAAPLRAANRHIAMVFSGTGDRTDQQIQEQMTIIAQHVDRLILKRDPWFLRGREPGVLEPLMI AAATAAGLDPAAIAELEGDEAAFNELTQPAKAGDVLIWIVYKDRASKIAIAQAWERNP
Sequences:
>Translated_538_residues MLEFRDIRALEGPNGYDHAPVALVRLVGETVEIDAWLKQVALACANYGIAHTEPVLQQHPSLGEYAITWRTATPESLALL LEQLAGTDAAASSAEIQAMLEQEQIPNPLHDLAKQHLPLWREAEAWWVGYGRYRQNAAQFDLSTYQTLPIIAISGTNGKT TTTRLIDFSLRTAGYQTGRTDTDGVWINNQAIEQGDWTGFGGAQRVLSHPAVEVAVLETARGGLLRRGLAFNHCEIAVLT NVADDHLPDRGLATVAEMAHFKATIVRAAQKAVILNADDPVLVEVVAPQATAPIIWFSLQATNPLIVQAQQNQQACLYLD ANQLILASAGQTQALIAVAELPLSFGGVAQHNIANALAAAAALFAFGLSAGQIALGLAGFQPNAEHNPGRLNQFQRDGIT LLIDYAHNSDGLRVLLASAAPLRAANRHIAMVFSGTGDRTDQQIQEQMTIIAQHVDRLILKRDPWFLRGREPGVLEPLMI AAATAAGLDPAAIAELEGDEAAFNELTQPAKAGDVLIWIVYKDRASKIAIAQAWERNP >Mature_538_residues MLEFRDIRALEGPNGYDHAPVALVRLVGETVEIDAWLKQVALACANYGIAHTEPVLQQHPSLGEYAITWRTATPESLALL LEQLAGTDAAASSAEIQAMLEQEQIPNPLHDLAKQHLPLWREAEAWWVGYGRYRQNAAQFDLSTYQTLPIIAISGTNGKT TTTRLIDFSLRTAGYQTGRTDTDGVWINNQAIEQGDWTGFGGAQRVLSHPAVEVAVLETARGGLLRRGLAFNHCEIAVLT NVADDHLPDRGLATVAEMAHFKATIVRAAQKAVILNADDPVLVEVVAPQATAPIIWFSLQATNPLIVQAQQNQQACLYLD ANQLILASAGQTQALIAVAELPLSFGGVAQHNIANALAAAAALFAFGLSAGQIALGLAGFQPNAEHNPGRLNQFQRDGIT LLIDYAHNSDGLRVLLASAAPLRAANRHIAMVFSGTGDRTDQQIQEQMTIIAQHVDRLILKRDPWFLRGREPGVLEPLMI AAATAAGLDPAAIAELEGDEAAFNELTQPAKAGDVLIWIVYKDRASKIAIAQAWERNP
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 58081; Mature: 58081
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEFRDIRALEGPNGYDHAPVALVRLVGETVEIDAWLKQVALACANYGIAHTEPVLQQHP CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHCC SLGEYAITWRTATPESLALLLEQLAGTDAAASSAEIQAMLEQEQIPNPLHDLAKQHLPLW CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC REAEAWWVGYGRYRQNAAQFDLSTYQTLPIIAISGTNGKTTTTRLIDFSLRTAGYQTGRT CCCCEEEEECHHHHCCHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEEEHHHCCCCCCCC DTDGVWINNQAIEQGDWTGFGGAQRVLSHPAVEVAVLETARGGLLRRGLAFNHCEIAVLT CCCCEEECCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEHHCCCHHHCCCCCCCEEEEEEE NVADDHLPDRGLATVAEMAHFKATIVRAAQKAVILNADDPVLVEVVAPQATAPIIWFSLQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCEEEEEEE ATNPLIVQAQQNQQACLYLDANQLILASAGQTQALIAVAELPLSFGGVAQHNIANALAAA CCCCEEEEECCCCCEEEEEECCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH AALFAFGLSAGQIALGLAGFQPNAEHNPGRLNQFQRDGITLLIDYAHNSDGLRVLLASAA HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCEEEEEECCC PLRAANRHIAMVFSGTGDRTDQQIQEQMTIIAQHVDRLILKRDPWFLRGREPGVLEPLMI CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHH AAATAAGLDPAAIAELEGDEAAFNELTQPAKAGDVLIWIVYKDRASKIAIAQAWERNP HHHHHCCCCHHHHEECCCCHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEHHCCCCC >Mature Secondary Structure MLEFRDIRALEGPNGYDHAPVALVRLVGETVEIDAWLKQVALACANYGIAHTEPVLQQHP CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHCC SLGEYAITWRTATPESLALLLEQLAGTDAAASSAEIQAMLEQEQIPNPLHDLAKQHLPLW CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC REAEAWWVGYGRYRQNAAQFDLSTYQTLPIIAISGTNGKTTTTRLIDFSLRTAGYQTGRT CCCCEEEEECHHHHCCHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEEEHHHCCCCCCCC DTDGVWINNQAIEQGDWTGFGGAQRVLSHPAVEVAVLETARGGLLRRGLAFNHCEIAVLT CCCCEEECCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEHHCCCHHHCCCCCCCEEEEEEE NVADDHLPDRGLATVAEMAHFKATIVRAAQKAVILNADDPVLVEVVAPQATAPIIWFSLQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCEEEEEEE ATNPLIVQAQQNQQACLYLDANQLILASAGQTQALIAVAELPLSFGGVAQHNIANALAAA CCCCEEEEECCCCCEEEEEECCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH AALFAFGLSAGQIALGLAGFQPNAEHNPGRLNQFQRDGITLLIDYAHNSDGLRVLLASAA HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCEEEEEECCC PLRAANRHIAMVFSGTGDRTDQQIQEQMTIIAQHVDRLILKRDPWFLRGREPGVLEPLMI CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHH AAATAAGLDPAAIAELEGDEAAFNELTQPAKAGDVLIWIVYKDRASKIAIAQAWERNP HHHHHCCCCHHHHEECCCCHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]