| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899949
Identifier: 159899949
GI number: 159899949
Start: 4321300
End: 4322685
Strand: Reverse
Name: 159899949
Synonym: Haur_3432
Alternate gene names: NA
Gene position: 4322685-4321300 (Counterclockwise)
Preceding gene: 159899955
Following gene: 159899948
Centisome position: 68.11
GC content: 52.24
Gene sequence:
>1386_bases ATGACCAATCCACCACAAGGGCTGGAAGAAACCACCCAAGGTGGCCCGCAGCGGCCTGTCGTGCCGCCACAGCGGGTTCA AATTCGCTGTCAAAATTGCCAAACGCCGTTTGTGGTGGCACTTTGGACATACGTCGATGTTGGGGTGCAGCCTGAATTAA AAGGTGCGATGCTTTCAGGTCAATTAAATGTCGCAGTTTGCCCTAGCTGTGGCGCTGGCGGCATGCTGGCCTCACCCTTG ATCTACCATGATCCTGAAAAGAAGTTTTTTTGGACGCTCTTTCCGCAAGAATTGAATTTGCCAACCGAGGAGCAAGAACG CTTCGTTGGCGAGGCTTCGAAAGTGGCTATGCAATTGTTGCCACCCGATGCGCCACGTGGCTATTTGCTGACTCCCCGCC GTTTCATCACCATGCAAACCATGCTCGAAACCTTGTTGGAGAGCGAAGGCATTACTAAAGAGGTGATGCAAGCGCAACGC CAACGGGTCGAGTTGCTAAGCCAATTGGCCGAAGCACTCGAGGCTGATCGAGCCGAGAATTTGCTCGATTCAGATCAAGG TAAATTGGCCCAAGTGGTGGCTGCTAACAAGGCGGCACTGGATGGCGAATTTTTCCTCACCCTCAATTCCTATATCGAAG CTGCCTTACAACAAGGTCGCGAAGATAGTGCCGAAATGATCGGCGAGTTGAGCCAACGGGTGATGCAGTTGAGTGGCTTT GATCCGGTAGCCGCTGGGTTACAAGAGCCAGCCGTCGAAGATGTGGTTGCCGCTTTGCGCGATGCCGATGATGCCAGCCT CGAAGATGTGATTAGCAATTATCGCCCGTTGATCGATGATGAAACCTTTGATGCTTGGGATGCCCAAATTGCTGCCTTGC CCGAAGCAGACCAAGCTGAGGCTCAAGCGCGACGCGATCATATCTACACCACGCTGGAGCGTATGGATGCTGAAGCCCAA GCCATTTTTGAAAAAGCCAATGGCCTGTTGCGTGATGCCTTGCAAGCCGAAGATCCGCGGGCGTTGTTAGTTGAGCGCCA TAAAGAGTTAAGCGAAGCCTTTTTCGTGGTGATCGATGCCAACTTGAATGCAGCGATGCGTACCAATCAGCAAATTATTG CCGAGCAATTGATGTTGTTGCGCCAAACTGCTGCCGAAGTGTTGCAAGAGGCCATGACTCCTCAAGAACGCTTGATCAAT CAATTATTGAGCGCTGAAACTGCTGGTGATGCTACCAAGTTGCTGCGCAAAAACATGGCTTTGGTCAATGGCGATTTCGT CAAGGAAGTCAACGAATTGGCCGAGCAAATGGAAAAAGCTGGGCGTAAGGAAGTCGTCGAGCGCCTCCGCCAAGTCGCCC GCGAATCGGCGAGCCTCCTGTTTTAA
Upstream 100 bases:
>100_bases TCAATCATGTGAATCCAATAGCCCACTAATAGTATTCTGCTACAACCTCGCGTATAATGCATAGTGGCTTTTAATCGTGT TCGTTGAAAGGAATTGCTCA
Downstream 100 bases:
>100_bases GGTCAAAAATCAGAAGTCAAAAGGCAGAATAGTTGGTGTAACTCGATTATAATAACCAAGGATTTTTGCCTTTTGATTTT GCCTTTTGATTTCTATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTNPPQGLEETTQGGPQRPVVPPQRVQIRCQNCQTPFVVALWTYVDVGVQPELKGAMLSGQLNVAVCPSCGAGGMLASPL IYHDPEKKFFWTLFPQELNLPTEEQERFVGEASKVAMQLLPPDAPRGYLLTPRRFITMQTMLETLLESEGITKEVMQAQR QRVELLSQLAEALEADRAENLLDSDQGKLAQVVAANKAALDGEFFLTLNSYIEAALQQGREDSAEMIGELSQRVMQLSGF DPVAAGLQEPAVEDVVAALRDADDASLEDVISNYRPLIDDETFDAWDAQIAALPEADQAEAQARRDHIYTTLERMDAEAQ AIFEKANGLLRDALQAEDPRALLVERHKELSEAFFVVIDANLNAAMRTNQQIIAEQLMLLRQTAAEVLQEAMTPQERLIN QLLSAETAGDATKLLRKNMALVNGDFVKEVNELAEQMEKAGRKEVVERLRQVARESASLLF
Sequences:
>Translated_461_residues MTNPPQGLEETTQGGPQRPVVPPQRVQIRCQNCQTPFVVALWTYVDVGVQPELKGAMLSGQLNVAVCPSCGAGGMLASPL IYHDPEKKFFWTLFPQELNLPTEEQERFVGEASKVAMQLLPPDAPRGYLLTPRRFITMQTMLETLLESEGITKEVMQAQR QRVELLSQLAEALEADRAENLLDSDQGKLAQVVAANKAALDGEFFLTLNSYIEAALQQGREDSAEMIGELSQRVMQLSGF DPVAAGLQEPAVEDVVAALRDADDASLEDVISNYRPLIDDETFDAWDAQIAALPEADQAEAQARRDHIYTTLERMDAEAQ AIFEKANGLLRDALQAEDPRALLVERHKELSEAFFVVIDANLNAAMRTNQQIIAEQLMLLRQTAAEVLQEAMTPQERLIN QLLSAETAGDATKLLRKNMALVNGDFVKEVNELAEQMEKAGRKEVVERLRQVARESASLLF >Mature_460_residues TNPPQGLEETTQGGPQRPVVPPQRVQIRCQNCQTPFVVALWTYVDVGVQPELKGAMLSGQLNVAVCPSCGAGGMLASPLI YHDPEKKFFWTLFPQELNLPTEEQERFVGEASKVAMQLLPPDAPRGYLLTPRRFITMQTMLETLLESEGITKEVMQAQRQ RVELLSQLAEALEADRAENLLDSDQGKLAQVVAANKAALDGEFFLTLNSYIEAALQQGREDSAEMIGELSQRVMQLSGFD PVAAGLQEPAVEDVVAALRDADDASLEDVISNYRPLIDDETFDAWDAQIAALPEADQAEAQARRDHIYTTLERMDAEAQA IFEKANGLLRDALQAEDPRALLVERHKELSEAFFVVIDANLNAAMRTNQQIIAEQLMLLRQTAAEVLQEAMTPQERLINQ LLSAETAGDATKLLRKNMALVNGDFVKEVNELAEQMEKAGRKEVVERLRQVARESASLLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51085; Mature: 50953
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPPQGLEETTQGGPQRPVVPPQRVQIRCQNCQTPFVVALWTYVDVGVQPELKGAMLSG CCCCCCCHHHHHCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCCHHCCC QLNVAVCPSCGAGGMLASPLIYHDPEKKFFWTLFPQELNLPTEEQERFVGEASKVAMQLL CCCEEECCCCCCCCCHHCCCEEECCCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHC PPDAPRGYLLTPRRFITMQTMLETLLESEGITKEVMQAQRQRVELLSQLAEALEADRAEN CCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDSDQGKLAQVVAANKAALDGEFFLTLNSYIEAALQQGREDSAEMIGELSQRVMQLSGF HHCCCCCHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC DPVAAGLQEPAVEDVVAALRDADDASLEDVISNYRPLIDDETFDAWDAQIAALPEADQAE CHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHCCHHHCCCCCHHHH AQARRDHIYTTLERMDAEAQAIFEKANGLLRDALQAEDPRALLVERHKELSEAFFVVIDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEC NLNAAMRTNQQIIAEQLMLLRQTAAEVLQEAMTPQERLINQLLSAETAGDATKLLRKNMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH LVNGDFVKEVNELAEQMEKAGRKEVVERLRQVARESASLLF HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNPPQGLEETTQGGPQRPVVPPQRVQIRCQNCQTPFVVALWTYVDVGVQPELKGAMLSG CCCCCCHHHHHCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCCHHCCC QLNVAVCPSCGAGGMLASPLIYHDPEKKFFWTLFPQELNLPTEEQERFVGEASKVAMQLL CCCEEECCCCCCCCCHHCCCEEECCCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHC PPDAPRGYLLTPRRFITMQTMLETLLESEGITKEVMQAQRQRVELLSQLAEALEADRAEN CCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDSDQGKLAQVVAANKAALDGEFFLTLNSYIEAALQQGREDSAEMIGELSQRVMQLSGF HHCCCCCHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC DPVAAGLQEPAVEDVVAALRDADDASLEDVISNYRPLIDDETFDAWDAQIAALPEADQAE CHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHCCHHHCCCCCHHHH AQARRDHIYTTLERMDAEAQAIFEKANGLLRDALQAEDPRALLVERHKELSEAFFVVIDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEC NLNAAMRTNQQIIAEQLMLLRQTAAEVLQEAMTPQERLINQLLSAETAGDATKLLRKNMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH LVNGDFVKEVNELAEQMEKAGRKEVVERLRQVARESASLLF HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA