| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899777
Identifier: 159899777
GI number: 159899777
Start: 4120600
End: 4122105
Strand: Reverse
Name: 159899777
Synonym: Haur_3259
Alternate gene names: NA
Gene position: 4122105-4120600 (Counterclockwise)
Preceding gene: 159899778
Following gene: 159899775
Centisome position: 64.95
GC content: 51.33
Gene sequence:
>1506_bases ATGCGACGGTTGAGCATAATGATGCTTTTAGCAAGTTTGCTCGTTGCTTGTGGTGGTGGAGCCAGCGAGCCAACCGCCCA ATCGAGCGAGCCAACTTCAGCGGCGGCAACTGCCGCCGCTACCAACACCCCCGATAACACGGTTGCCACGGTTGATGCTA GTGCTGCCAACACAAGCTTTGCTAGCGCCGCCCCGCTCGATGGTCAAATTAAAGCCAGCGTTAATCAATCAAATCTCTAT TATCGACTCGATGTGCCAGTTGGTGGGGTTGTTACCAGCACGATCAAAGTTGATGGTCAATCGCCGCAAGGCCTCAGCGC GGTTTTGTATGATAAAAACCAAAGTTTCCTAAAATCGATCAATCTTGCGCCAGGCGAAACAGGCATGTTGGGCTATCAAT TTGGCTTGCCCAATGGTGGCCAAGTAGTCTGGGAAATCAGCGGCAATGCCTTATTTAGTTTGACTGGCTCTGCCGCCGAG CAAGCCGATGCGGGCAGCAAGGGCGATGCTGGCGACGATTTTGGTCAAGCGGTCAATGCCAAGCTTGGGACGCTGGCTGG CAGCCTTGGCGATGCCGATATGACCGATTATTTTAGCCTTGACGTGCCCGAAAAAGGCGGCACATTGACGATTGATGCCA AAACTAATGGCGATGTGCAGCTTCAGTTGTTCGATGAAACCCAAAACTACTTGAATAATGCTAGCGTTTCAGCAAACACT CCGGTTAGCTTAAACCGAATTTTGAATAGCGAGCAAGGTGGCCGTTGGTTTGTGCGGGTCGATGGCACGGGCAGCTACGA TTTGAGCCTAGATTTTGCGGCGCAAACTGATGGATCAAGCGCTGGCGATGCTCCCGACGAGATCGATCGCGCAGTGAAAG TTGAGGTCGGCACAATTACTGGCATGCTTGGTGGCGATGATCGCGGCGATATTTTTAGCGTTGAAGTGCCACAAACAGGC TTTGCCTATACCCTGACTGCCAGCACCAAACAAGGCAGCCTGACCATCCAAACCTTGGATAACTCGCAAAACTATGTGGA TCAAGCCGATTTTACCAGTGATGCGCCTGTTGCGGTTGGTCGAACCTTGCCTGGCGAACGTGGCCCGCGCTGGTTTGTCA AAGTCTTGGGTGAAGGCGAATATCAGCTTGAATTGGTGACCATTGCCCAAAATGATGCTGGTAGTAGTAAAGATGCTGGC GATGAGATTCCAGCGGCGGTTGTGGTTGCTGCATCGCCAATCGAAGGCCGGATTGGCAACGACGATCGCGATGATTATCT GCGAATTCCAGCAAGCCTTGGACGCAAAATTAGCGTGACAGTGATTGGTGATGGCTTGATCGATGTGCAACTCTATAATC AAGAGCGTAATTACGCCGAAAGTGCCAAATCGATTATTGCTGGTTCGCCCGCCAGCCTCAACGCGCCCGAAGGTGATGGC GATTACTATCTTCAAATTACCAATGGCGATAGTGCTGTCAACTATCGAATTGAAATTCAGCCTTAA
Upstream 100 bases:
>100_bases GTCTATGTCGATGGTGGCTATAACGTGCTCGGCATGAGCGAAGAAGAACAATCAAGCTAACAGTGATGCGCCAACCATCG CTGTTGTAAGGAGTACAACA
Downstream 100 bases:
>100_bases AGCTTAACGGTTGCCCCGCCGCTGGAATTGCCAACGGCGGGGCATTTTAGCTTATTCGACGGCTGTCCAACTGCTATGAA TATCACTAAATAAGCGACCA
Product: peptidase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MRRLSIMMLLASLLVACGGGASEPTAQSSEPTSAAATAAATNTPDNTVATVDASAANTSFASAAPLDGQIKASVNQSNLY YRLDVPVGGVVTSTIKVDGQSPQGLSAVLYDKNQSFLKSINLAPGETGMLGYQFGLPNGGQVVWEISGNALFSLTGSAAE QADAGSKGDAGDDFGQAVNAKLGTLAGSLGDADMTDYFSLDVPEKGGTLTIDAKTNGDVQLQLFDETQNYLNNASVSANT PVSLNRILNSEQGGRWFVRVDGTGSYDLSLDFAAQTDGSSAGDAPDEIDRAVKVEVGTITGMLGGDDRGDIFSVEVPQTG FAYTLTASTKQGSLTIQTLDNSQNYVDQADFTSDAPVAVGRTLPGERGPRWFVKVLGEGEYQLELVTIAQNDAGSSKDAG DEIPAAVVVAASPIEGRIGNDDRDDYLRIPASLGRKISVTVIGDGLIDVQLYNQERNYAESAKSIIAGSPASLNAPEGDG DYYLQITNGDSAVNYRIEIQP
Sequences:
>Translated_501_residues MRRLSIMMLLASLLVACGGGASEPTAQSSEPTSAAATAAATNTPDNTVATVDASAANTSFASAAPLDGQIKASVNQSNLY YRLDVPVGGVVTSTIKVDGQSPQGLSAVLYDKNQSFLKSINLAPGETGMLGYQFGLPNGGQVVWEISGNALFSLTGSAAE QADAGSKGDAGDDFGQAVNAKLGTLAGSLGDADMTDYFSLDVPEKGGTLTIDAKTNGDVQLQLFDETQNYLNNASVSANT PVSLNRILNSEQGGRWFVRVDGTGSYDLSLDFAAQTDGSSAGDAPDEIDRAVKVEVGTITGMLGGDDRGDIFSVEVPQTG FAYTLTASTKQGSLTIQTLDNSQNYVDQADFTSDAPVAVGRTLPGERGPRWFVKVLGEGEYQLELVTIAQNDAGSSKDAG DEIPAAVVVAASPIEGRIGNDDRDDYLRIPASLGRKISVTVIGDGLIDVQLYNQERNYAESAKSIIAGSPASLNAPEGDG DYYLQITNGDSAVNYRIEIQP >Mature_501_residues MRRLSIMMLLASLLVACGGGASEPTAQSSEPTSAAATAAATNTPDNTVATVDASAANTSFASAAPLDGQIKASVNQSNLY YRLDVPVGGVVTSTIKVDGQSPQGLSAVLYDKNQSFLKSINLAPGETGMLGYQFGLPNGGQVVWEISGNALFSLTGSAAE QADAGSKGDAGDDFGQAVNAKLGTLAGSLGDADMTDYFSLDVPEKGGTLTIDAKTNGDVQLQLFDETQNYLNNASVSANT PVSLNRILNSEQGGRWFVRVDGTGSYDLSLDFAAQTDGSSAGDAPDEIDRAVKVEVGTITGMLGGDDRGDIFSVEVPQTG FAYTLTASTKQGSLTIQTLDNSQNYVDQADFTSDAPVAVGRTLPGERGPRWFVKVLGEGEYQLELVTIAQNDAGSSKDAG DEIPAAVVVAASPIEGRIGNDDRDDYLRIPASLGRKISVTVIGDGLIDVQLYNQERNYAESAKSIIAGSPASLNAPEGDG DYYLQITNGDSAVNYRIEIQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52121; Mature: 52121
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLSIMMLLASLLVACGGGASEPTAQSSEPTSAAATAAATNTPDNTVATVDASAANTSF CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCCCC ASAAPLDGQIKASVNQSNLYYRLDVPVGGVVTSTIKVDGQSPQGLSAVLYDKNQSFLKSI CCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCHHHHHHC NLAPGETGMLGYQFGLPNGGQVVWEISGNALFSLTGSAAEQADAGSKGDAGDDFGQAVNA CCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHCC KLGTLAGSLGDADMTDYFSLDVPEKGGTLTIDAKTNGDVQLQLFDETQNYLNNASVSANT HHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCHHHHHCCCCCCCCC PVSLNRILNSEQGGRWFVRVDGTGSYDLSLDFAAQTDGSSAGDAPDEIDRAVKVEVGTIT CEEHHHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHCCEEEEEEEEEE GMLGGDDRGDIFSVEVPQTGFAYTLTASTKQGSLTIQTLDNSQNYVDQADFTSDAPVAVG EEECCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEC RTLPGERGPRWFVKVLGEGEYQLELVTIAQNDAGSSKDAGDEIPAAVVVAASPIEGRIGN CCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCC DDRDDYLRIPASLGRKISVTVIGDGLIDVQLYNQERNYAESAKSIIAGSPASLNAPEGDG CCCCCEEECCHHHCCEEEEEEEECCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC DYYLQITNGDSAVNYRIEIQP CEEEEEECCCCEEEEEEEECC >Mature Secondary Structure MRRLSIMMLLASLLVACGGGASEPTAQSSEPTSAAATAAATNTPDNTVATVDASAANTSF CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCCCC ASAAPLDGQIKASVNQSNLYYRLDVPVGGVVTSTIKVDGQSPQGLSAVLYDKNQSFLKSI CCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCHHHHHHC NLAPGETGMLGYQFGLPNGGQVVWEISGNALFSLTGSAAEQADAGSKGDAGDDFGQAVNA CCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHCC KLGTLAGSLGDADMTDYFSLDVPEKGGTLTIDAKTNGDVQLQLFDETQNYLNNASVSANT HHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCHHHHHCCCCCCCCC PVSLNRILNSEQGGRWFVRVDGTGSYDLSLDFAAQTDGSSAGDAPDEIDRAVKVEVGTIT CEEHHHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHCCEEEEEEEEEE GMLGGDDRGDIFSVEVPQTGFAYTLTASTKQGSLTIQTLDNSQNYVDQADFTSDAPVAVG EEECCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEC RTLPGERGPRWFVKVLGEGEYQLELVTIAQNDAGSSKDAGDEIPAAVVVAASPIEGRIGN CCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCC DDRDDYLRIPASLGRKISVTVIGDGLIDVQLYNQERNYAESAKSIIAGSPASLNAPEGDG CCCCCEEECCHHHCCEEEEEEEECCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC DYYLQITNGDSAVNYRIEIQP CEEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA