| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899769
Identifier: 159899769
GI number: 159899769
Start: 4112784
End: 4114154
Strand: Reverse
Name: 159899769
Synonym: Haur_3251
Alternate gene names: NA
Gene position: 4114154-4112784 (Counterclockwise)
Preceding gene: 159899770
Following gene: 159899768
Centisome position: 64.82
GC content: 54.49
Gene sequence:
>1371_bases ATGACAGCAGATATCGTCCAGCATAAGTCTGATGATATGGAACAAGTTTCCAGTCGGTTCCAAAAATTGCATGATCACCA AGTGCAAATGGAAGCGATGATTCGCCGCATGTATGAGGAACTTCGAGGTGGTGCTTGGCAAGGGGATGCAGCCCAAGCAT TCTTTGCCGAAATGAACGAGCATATCTTTCCTGCTATGAAGCGATTTCAAAATGTGCTAGCAGTGAGCGGCGAAGTTACC AAGCAAATCTCGCAAATCTTCCGTCAAGCCGAAGAAGAAGCCGCCAAAGGCATTACCTTTGATGGCAGCGGCGCACCATC TGGTGGTGGCAATGGCACGGCTAGTGCTGGTGGCGGCGGCGGTGGCAACGCCGATGGTAGTGGCAGTGGTGGCAGTAATG CTGGTGCTACTGGTGGTGGTGCAGGTATTGCTGCTGGCGGCGGCGGTTCATCGTCAGGTGGCGGTGGCGGCGGTTCATCG TCAGGCGGCGGTGGTGGCGGCTCATCGTCAGGTGGCGGTGGTGGCGGTTCATCGTCAGGCGGCGGTGGTGGCGGCGGTAG TAGCACTGCTGGCGCAGGCGGCGGCGGTGGCGGTGGCGGCGGTGGTGGCAGCAGCCAAGAACCAATGTCAACCGAGCAAG TCTTCAATGATAAATACATGGGCGATTTGGTCGGCCAACAATTCCAAGGTGCTGGCAACCCTGAGTTGAACTCGGCCATG GAATTGCTGACCAGTGGCAATGCAACCCCTGAGCAAATTGAAGAAGCACTCAAGAAGATTGCCGCAGCTCGTGGCGTGCC ATTAGAAAAAATTCAAGCCGACTATGGCAAGTTCCTTGAATTGCGCGAACAAGCTGCCAAAACCGGCGCAGCCAACGGCC AATCGGCTGTTGAAGCAATCAACCAAACCTTCCATGGCGATTTCATGGGCAGCACCTCAAGCTTGCGCTATGGTAAAGTC GTCGGCGATGTCTTGGGCATCGACCCAGTATTTGGTTCAATGCTCAATCCAAGCGGTGGCTTGGTTGGCCCTGGCAACAA AGCAATCGACTTAGGCGATTCACCAGTCAGCTATCACGGTGCTGTCCACGATGCTGCTGGCTACCTCTTCAACTACCACG ATATGGGCCCAGGCTATAACTACCTTGGCTTGGAACGCCGCGACACGGCCAACCCATTGACTGGCCAAGAATCTGGTATT CGCTACTGGAACGAAAAAATGGGCAACACTGGCATCGGCGCAACCATTAGCAACGGCGCTGGGAGCTTGATTGGTAAAGC TCAAGATGCTGTCAACTGGTTTGGCGATGTCAAGCAAGATGTCCAAAATACCTGGAGCGGAGTCAAAGATTGGTTCTCCA AAACCTTCTAG
Upstream 100 bases:
>100_bases TTTGGTATGGCCCGTCTTGTGAGAGAACAGGAATCGTGGAGGGTTCGTGGTATTTTTTTGTTACCGTCGCATTTGTGACG GTGCTTGCTAGGGAGGCTGC
Downstream 100 bases:
>100_bases GTAATCGATAAGATCAACAGTATAATGGGCAGTGGCTTGGACGTTGTTACAACGCCGATCCACTGCCCATTTCAGCAGGA GGCCATATTATGGCACAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MTADIVQHKSDDMEQVSSRFQKLHDHQVQMEAMIRRMYEELRGGAWQGDAAQAFFAEMNEHIFPAMKRFQNVLAVSGEVT KQISQIFRQAEEEAAKGITFDGSGAPSGGGNGTASAGGGGGGNADGSGSGGSNAGATGGGAGIAAGGGGSSSGGGGGGSS SGGGGGGSSSGGGGGGSSSGGGGGGGSSTAGAGGGGGGGGGGGSSQEPMSTEQVFNDKYMGDLVGQQFQGAGNPELNSAM ELLTSGNATPEQIEEALKKIAAARGVPLEKIQADYGKFLELREQAAKTGAANGQSAVEAINQTFHGDFMGSTSSLRYGKV VGDVLGIDPVFGSMLNPSGGLVGPGNKAIDLGDSPVSYHGAVHDAAGYLFNYHDMGPGYNYLGLERRDTANPLTGQESGI RYWNEKMGNTGIGATISNGAGSLIGKAQDAVNWFGDVKQDVQNTWSGVKDWFSKTF
Sequences:
>Translated_456_residues MTADIVQHKSDDMEQVSSRFQKLHDHQVQMEAMIRRMYEELRGGAWQGDAAQAFFAEMNEHIFPAMKRFQNVLAVSGEVT KQISQIFRQAEEEAAKGITFDGSGAPSGGGNGTASAGGGGGGNADGSGSGGSNAGATGGGAGIAAGGGGSSSGGGGGGSS SGGGGGGSSSGGGGGGSSSGGGGGGGSSTAGAGGGGGGGGGGGSSQEPMSTEQVFNDKYMGDLVGQQFQGAGNPELNSAM ELLTSGNATPEQIEEALKKIAAARGVPLEKIQADYGKFLELREQAAKTGAANGQSAVEAINQTFHGDFMGSTSSLRYGKV VGDVLGIDPVFGSMLNPSGGLVGPGNKAIDLGDSPVSYHGAVHDAAGYLFNYHDMGPGYNYLGLERRDTANPLTGQESGI RYWNEKMGNTGIGATISNGAGSLIGKAQDAVNWFGDVKQDVQNTWSGVKDWFSKTF >Mature_455_residues TADIVQHKSDDMEQVSSRFQKLHDHQVQMEAMIRRMYEELRGGAWQGDAAQAFFAEMNEHIFPAMKRFQNVLAVSGEVTK QISQIFRQAEEEAAKGITFDGSGAPSGGGNGTASAGGGGGGNADGSGSGGSNAGATGGGAGIAAGGGGSSSGGGGGGSSS GGGGGGSSSGGGGGGSSSGGGGGGGSSTAGAGGGGGGGGGGGSSQEPMSTEQVFNDKYMGDLVGQQFQGAGNPELNSAME LLTSGNATPEQIEEALKKIAAARGVPLEKIQADYGKFLELREQAAKTGAANGQSAVEAINQTFHGDFMGSTSSLRYGKVV GDVLGIDPVFGSMLNPSGGLVGPGNKAIDLGDSPVSYHGAVHDAAGYLFNYHDMGPGYNYLGLERRDTANPLTGQESGIR YWNEKMGNTGIGATISNGAGSLIGKAQDAVNWFGDVKQDVQNTWSGVKDWFSKTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45629; Mature: 45498
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADIVQHKSDDMEQVSSRFQKLHDHQVQMEAMIRRMYEELRGGAWQGDAAQAFFAEMNE CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH HIFPAMKRFQNVLAVSGEVTKQISQIFRQAEEEAAKGITFDGSGAPSGGGNGTASAGGGG HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GGNADGSGSGGSNAGATGGGAGIAAGGGGSSSGGGGGGSSSGGGGGGSSSGGGGGGSSSG CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGGGGSSTAGAGGGGGGGGGGGSSQEPMSTEQVFNDKYMGDLVGQQFQGAGNPELNSAM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ELLTSGNATPEQIEEALKKIAAARGVPLEKIQADYGKFLELREQAAKTGAANGQSAVEAI HHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH NQTFHGDFMGSTSSLRYGKVVGDVLGIDPVFGSMLNPSGGLVGPGNKAIDLGDSPVSYHG HHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCEECCCCCEEECCCCCCHHCC AVHDAAGYLFNYHDMGPGYNYLGLERRDTANPLTGQESGIRYWNEKMGNTGIGATISNGA HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCC GSLIGKAQDAVNWFGDVKQDVQNTWSGVKDWFSKTF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TADIVQHKSDDMEQVSSRFQKLHDHQVQMEAMIRRMYEELRGGAWQGDAAQAFFAEMNE CCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH HIFPAMKRFQNVLAVSGEVTKQISQIFRQAEEEAAKGITFDGSGAPSGGGNGTASAGGGG HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GGNADGSGSGGSNAGATGGGAGIAAGGGGSSSGGGGGGSSSGGGGGGSSSGGGGGGSSSG CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGGGGSSTAGAGGGGGGGGGGGSSQEPMSTEQVFNDKYMGDLVGQQFQGAGNPELNSAM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ELLTSGNATPEQIEEALKKIAAARGVPLEKIQADYGKFLELREQAAKTGAANGQSAVEAI HHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH NQTFHGDFMGSTSSLRYGKVVGDVLGIDPVFGSMLNPSGGLVGPGNKAIDLGDSPVSYHG HHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCEECCCCCEEECCCCCCHHCC AVHDAAGYLFNYHDMGPGYNYLGLERRDTANPLTGQESGIRYWNEKMGNTGIGATISNGA HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCC GSLIGKAQDAVNWFGDVKQDVQNTWSGVKDWFSKTF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA