| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899741
Identifier: 159899741
GI number: 159899741
Start: 4077069
End: 4077425
Strand: Reverse
Name: 159899741
Synonym: Haur_3223
Alternate gene names: NA
Gene position: 4077425-4077069 (Counterclockwise)
Preceding gene: 159899743
Following gene: 159899740
Centisome position: 64.25
GC content: 51.26
Gene sequence:
>357_bases ATGAATCCTATCTTGACTCAGTGCCCGGTTTGTTCGGGCGAATTAACCAGTACCCGTTTGGAATGTGCAATTTGCAACAC AGCGATTGAAGGCCAATTTACCCTAGGACGCTTGGGTCGTTTGACCCGCGAGCAACTGAGCTTTGTGGAACTCTTGGCAC AACATCGAGGCAATGTCAACCAAGTTGCGAGTTCGTTGAGTGTCTCATACACCACTGCTCGTATGCGTATGGACGAAATT GCCGCCGCTTTAGGTGCACCGCCTTCAATCACGCGGCCTGATTCGCGCGAGGTGTTGCGTCAACTTGAAACAGGCGAACT GAGTGCTGAAGAAGCGCTCAAACTGTTACAAGGCTAG
Upstream 100 bases:
>100_bases GAAATATTTCTAATCTAAAATTAATATAACTTAGATTGACATTTATTATCAACTTAGGTTACACTTTTTATCAGATGAAC TGATACTTCGCGAGGTATTG
Downstream 100 bases:
>100_bases GGAGGTATTTCAAATGGCAACCGAAGAACGCATGCGCATTTTGCGCCTGATTGAAAATGGCCAGTTGACTGCCGAAGAAG GGGCACGATTGCTTGGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator Fis Family
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MNPILTQCPVCSGELTSTRLECAICNTAIEGQFTLGRLGRLTREQLSFVELLAQHRGNVNQVASSLSVSYTTARMRMDEI AAALGAPPSITRPDSREVLRQLETGELSAEEALKLLQG
Sequences:
>Translated_118_residues MNPILTQCPVCSGELTSTRLECAICNTAIEGQFTLGRLGRLTREQLSFVELLAQHRGNVNQVASSLSVSYTTARMRMDEI AAALGAPPSITRPDSREVLRQLETGELSAEEALKLLQG >Mature_118_residues MNPILTQCPVCSGELTSTRLECAICNTAIEGQFTLGRLGRLTREQLSFVELLAQHRGNVNQVASSLSVSYTTARMRMDEI AAALGAPPSITRPDSREVLRQLETGELSAEEALKLLQG
Specific function: Unknown
COG id: COG3877
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12803; Mature: 12803
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPILTQCPVCSGELTSTRLECAICNTAIEGQFTLGRLGRLTREQLSFVELLAQHRGNVN CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH QVASSLSVSYTTARMRMDEIAAALGAPPSITRPDSREVLRQLETGELSAEEALKLLQG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MNPILTQCPVCSGELTSTRLECAICNTAIEGQFTLGRLGRLTREQLSFVELLAQHRGNVN CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH QVASSLSVSYTTARMRMDEIAAALGAPPSITRPDSREVLRQLETGELSAEEALKLLQG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA